>Osa03LNT0198000.2

ACAAAAACACAAGATGCCATTTATCCTTCAATATATTACAGCTTTGCACCTCAATTCGCAAGCAATCTGTGCCACTCATAAATAGTTTTGTTCTCTGAATGACCAAAAGATTAAGCATCACGACGAATATATTACACATCTTGCTAGGCTTGACAAAGCCCAAGAAGCCTAATCTAAAAATAAGCTGAGTAGTTTGCACTGTGACACAACAGTACAGCCAATAGCAGTAGTTGACAGTCCTTCTTCAGGCCTTAATACAGCACTGGAAGTAGCTCAGAAACGTCCTCCGTCGGCGAGCCGTGGCGGCCATGGAGTTGCCGGTGGCGGTGGTCGTCGGCCGGCCGGCCGAGGTTGGCCTTGGCGGGCTTCTGCTGCGGCTGCGGCTGCTGCTGCTTCTGCTGGGCGAGGAGGTCGTCGTCGCCGCCGAGGCTGGTGCGGGAGAGCTCCTTCTTGTTCTGCTTCCGCATCTCGCGGATCTTGGAGAAATCCATGGAGTAGTCCGGCAGCGCGCCGTTCTTCATGTCCCAGTCCCCGAACGCCGGCACCGTCATCCACCCGTTCCGGCCGCCCGCCGCCGCCGCGCCATGCCCCCCCTTGATGTTCTCCATGGTGGTTTGCTGGATAATGATGATCTCTCTCACGCAGCCTCGCAAAACGCAACTGATCTCTCTAGATTATCTCTAGAATATCTTCTTCCTCCTGGATGGCAAGCTGCCAAGCTGAGCAGTGCTCAACTTGTCTTGGAGGTGGTAGCGAAGAATGTGTGGCGACTGGAGAGAAGAAAGCGATAGAGCTGTACTTATATGTTGACGAAGAATGAGGAGAAGAAAAAAAAATTGATGTTT

Explanation	CPC Score
noncoding (weak)	-0.0653508

Transcript ID	Chromosome	Locus	Ref	Alt
Osa03LNT0198000.2	3	3748661	A	C
Osa03LNT0198000.2	3	3749121	C	T
Osa03LNT0198000.2	3	3750287	A	G
Osa03LNT0198000.2	3	3750510	T	A
Osa03LNT0198000.2	3	3749922	T	G
Osa03LNT0198000.2	3	3749944	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa03LNT0198000.2	osa-miR6245	Translation	5.0	11.068	1	21
Osa03LNT0198000.2	osa-miR2100-5p	Cleavage	2.5	17.424	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0198000.2	3	qHEJ-3	Morphological trait	Shoot/Seedling	RM175	RM22
Osa03LNT0198000.2	3	S34(t)	Physiological trait	Sterility	nan	nan
Osa03LNT0198000.2	3	qOE3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0198000.2	3	qTA3	Physiological trait	Eating quality	nan	nan
Osa03LNT0198000.2	3	rn3	Resistance or Tolerance	Drought tolerance	RM231	RM175
Osa03LNT0198000.2	3	qDEF-3	Physiological trait	Flowering	R518	C721
Osa03LNT0198000.2	3	qtl3.1	Resistance or Tolerance	Drought tolerance	RM7332	RM545

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus