© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0017300.1
GCACAAGATGAATCTTATCAGTGAAGTGAAACATGTGTATTCTGGAACTGAAGTTTGCACCACTGAACCGGTGAACCCTTCAGAATTACAATGTACACAAAGGAATGGAAACTTTTACTCAACAAAAAGTACAAAAAAACTGCACATCCTTGGTCAAAAGAACAAACAAAAAGCAAGCCCTTTTGTGGTGGAATGTTAAGTTTCTGTTGTTATAAACCATATTTTACAACCATAATCAGATCTGTATCAAAGATCAACACCATTAGTGAAATGACAACTCAAAACTAATCCTGTACAAGCCATGATAGGAATCATCTCCAATTCTCCATCGGGGCTTAAGGTATAAGAGCTTTCCTGTACAACTCATCCTTGCCATCAGCAGGTGAATACTTCATAAGCATCACCCTGTTAGACGCTGTTTCTGCAGAGCTTAATACATGCGCTGCATTCCGATACCACGGTTGCAAATGAGGATCAAGAGAAGGTGAGTTTGGGAGCATCACTGAACCCCAGTCTCTCTGCCCAACCTTCGCTTCACATATTCTTCGTCGTACCAAAAGCCCAGATACATCTTCTCTCCTAATCTCTGTCATGGTTCGTGCGATTGCCATGCACAGGAGAAGCACAAAAACTGCATCCTCTTCAGGTAAGAATTCTACCGCAAGTAGTTTCCAGTTGAGGAGCATAGTTGCTCTGTCACCTAGATGATCAGGTGATGTACGAACTAGGGTAAGGTATTCCTCCTCATCATTGCGGTCATTTAATGTGCTTTCCTTGTTTATTCTGTAGTTCAATCTCCTCCCTACAAGAAGCCTTGCCTCTTCTCCTGAGCTTTCATTTCGAATATGGAAGTTTAAGTCATCTCCCAACTTTACCGTCAGTACATCTCCAGTTGAAAAGCGCCAAACCACCTTGCTGTCCTGTTGATCTTTTTCTGGGGTTGCTGTTCCCACCACCTTCTCAGGAGCATAACCGACGGAGCTTGCATTTGCAATGTATGACCATGAACCCTCTCTAATCTCAATGATTCTGTCCTCCCATTTCACTGCTATGGGAGTTTCAGCACCTCTCCGCCAAATCCCTCTGCCTATTCTTATCCGAATGACAAAACATTCTTTCCTACTATGATCAAGCACCGTGCGAGTCAGCCATCGTCCTTCTTGTGGACGGTAACCTTTTGTCCGCAATATGACATCAGAAATCATAGCCCCACCATCATCGGTAACTCGGTCAGGTACGCACTTCAACAAGTATGGTGCTTGAACCGGAGGGGTGATTGATGCCATTGCTTTCATCCTAACATCAAGCTCCTCTGTAAGCATGAGGGATTTCTCATGCAACATATCACTCCATGAGAATGAGATGTTCTTGATGAGCTTGCTGTTCCTGAAGCACCCACTTGTGCTGCGTCTGACCTCAATGATGAGGCCTCTTGTTGAAAACTCACAATATAGGTGCCATGTTTTTTGCCAGTTTTTGCAGGATAAATTGAACAGTGGTATGTTGAGCTTTAGTGATCTGTAACACCTCTGTGTCCGCAAACGTAAGAATTCCTTACTGGTGTGTTCACTGTCAAATTCTCCTTTCAGGAACACATATACCTCCATAATGAACCTAGGTTGCAGCCCTTTGTACAGTCGATTAGCATCCTCTTCTGATGCTGCTGTCTCCCAATAGAATGCTTCTCTCGCTGCATCAACTTCTGCTTTATCAATCTCTGATCCAGCCATATCGTATGGTTCATCGTATGCCTCCTCCCACAATACCCTTGTTCTCTCCACCATCTCTTCACTCACCACTTCCCCATAACCCACAACTATTTTTGCAACATTATCCTTGACGGCCATCGCTGCCATGTCTGCGTAATAGCTCACTGGGAAACTCTGGTGAGCAAGCCACATTAGCAGTATGTCCAGGCTAGGCACCAGCCGCGTGTTTCCTTGGGTTGTACTCACAATTTTCTTGATAAGTTCAAGGAAACGCATGTATCTCCGCCTAGCAGCAACATGATAGACACCTTCTGAGATGAAGGGTGAGGCAAAGCGGGCTGCTAGGCCAGTATATCTTTGAACCATTTCGATAATTTCACTAGCAGATTTGTCATTACTACTGTTTCCTTCAGTTTCATTATCTTCAAGATCAAATGGCTCCGATGGATAGTGTGCAGCCCAGACATCCCGACAGTGGTCAGCGGCATATTCTTCATTATCAGCATCAAGGATCGACGGACGGTTGATGAGGCGTCCAAACCTTGATGCACAGTAAGCAGCATAGCTCTCATGGTGGAAGCAGTGGCAGAGCCAGACGAGCCGCACGTCGGGCGGCGGCACCAGCATCGGCGCCTCCCCTCCCGCCCCCTCCGCCGCCACGAGCGGCATCCACAGCTCCTCGTACCTCCGCACGGACCGCGGCCCCACCACCCCAGCTCCACCCCGCTCCCCGTCCCCGGAGCGGAGGAGCGCGAGCAGCCGGCGCGCGGCCGCCACGAGGTCGACGGAGAAGGAGAACGCGGGCCCCGCCGCCTCCCGCTCCCGCCCGCCGGGGCCGGACATCGCCGCGGAAGGTGGTGGCGAGGCGTGGGCGTGGGCGTGGGCGTGGGCGTGGCGTGGCGCGTCACAGCTCTGCAGGTGGTATGCGGTGGCGGTGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0017300.1 | 1 | 13802601 | A | G |
| Osa01LNT0017300.1 | 1 | 13800083 | A | G |
| Osa01LNT0017300.1 | 1 | 13800453 | G | A |
| Osa01LNT0017300.1 | 1 | 13801038 | A | T |
| Osa01LNT0017300.1 | 1 | 13801593 | A | T |
| Osa01LNT0017300.1 | 1 | 13801837 | T | C |
| Osa01LNT0017300.1 | 1 | 13802328 | A | G |
| Osa01LNT0017300.1 | 1 | 13802476 | G | C |
| Osa01LNT0017300.1 | 1 | 13802753 | G | T |
| Osa01LNT0017300.1 | 1 | 13803136 | A | T |
| Osa01LNT0017300.1 | 1 | 13803420 | T | C |
| Osa01LNT0017300.1 | 1 | 13804278 | T | A |
| Osa01LNT0017300.1 | 1 | 13804323 | A | G |
| Osa01LNT0017300.1 | 1 | 13804371 | A | G |
| Osa01LNT0017300.1 | 1 | 13804675 | A | T |
| Osa01LNT0017300.1 | 1 | 13804704 | C | G |
| Osa01LNT0017300.1 | 1 | 13800415 | T | G |
| Osa01LNT0017300.1 | 1 | 13801465 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0017300.1 | osa-miR818f | Translation | 4.5 | 10.223 | 1 | 21 |
| Osa01LNT0017300.1 | osa-miR396c-3p | Cleavage | 4.5 | 22.75 | 1 | 21 |
| Osa01LNT0017300.1 | osa-miR390-5p | Translation | 4.0 | 18.039 | 1 | 21 |
| Osa01LNT0017300.1 | osa-miR1426 | Cleavage | 5.0 | 24.804 | 1 | 21 |
| Osa01LNT0017300.1 | osa-miR5486 | Translation | 5.0 | 14.438 | 1 | 21 |
| Osa01LNT0017300.1 | osa-miR5500 | Translation | 5.0 | 17.863 | 1 | 22 |
| Osa01LNT0017300.1 | osa-miR531b | Translation | 5.0 | 23.181 | 1 | 20 |
| Osa01LNT0017300.1 | osa-miR812f | Cleavage | 4.5 | 13.882 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0017300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0017300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0017300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0017300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0017300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0017300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)