© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0198500.1
CTGAATGACCACCAAATTCAGAAGCCAGGAAACATAACGGGGTGCTAGTTTTGTCCTTGTCACAAGTCTAGCATGATCAGATTACTGGTACCAGCTGCAGCTGCACCGTCTCCAAACTAAGGAGGCAGAGGAACAACAGACACAGATGTCAAGCACCCTAGTTACAGTTGCACAAAACCCACCCATACCCATCAGTTTACACACAGGTTCAGTCAGATTTTTTTTTGCTGGGCACCACACATAAGCCAAGGATGATTTGCCATGACAGAAACGGCGAGGATCTCAAGCGCCCTCTTTCGCACGACGATGATGGAGATCACTGGACGACAAGCTGTGCTCGTGCTTTGAGAACACAACGCCGTTTGCAGAGACGAGCCTTGGGGTGCCACCATCTGAAGCTTCAGGCTGCTGCTTTGTGTTGAGGAATCTCCCCCCTGTTCCCCGAGCTCTCTTCATCGCGTGTTGATGCCGGGATTCATGGAGGTACGGCTTGCGGTTTTTCACCAGCTTGTTTTCAGCCTCTAACTTTGCACGGAGCTGTCTCCTTCGGAGAATCGCATGGTATTGCTTTGCATTTACATAAATAGGCTCTTCGGTGGCTGGTTCTATTGGTAGCGGGACTCGGGAGGATGACATCACGCCCACAATCTGGGGATGCATAATAGCATGTGTGCCATAAGTCGCTACAGCACCACCATAGAACGAATCAGCATATGGATATGATATGCCAAAGGGTTGGCTACGGTCAGGTTCCGAATGTGCATACACAGTTTCTGATTTGCCCAGAGATAAAGCTGACATCATCTTACCTTCATCACTCTTCGTGTAACCATCAAGATTACCAGATTGATCATTCTGCTCATTGAGGCTTCCTTCGCTCATTCCAGACACTTCACGAGGAGATCCACTAGTTGATTGGGTAGCTGATGACTCGTAGTCAGGCATTTTATGACCAAACTGAATCATTACTGTGCCATTTTCTGTGAGATGAGGAGGGAGCATGTCCCCTCTCCGGCAAACCTCCTCCCTTGCTGCCTCCTCACTTCTCACCTTGCTTCTCTCCTCTGCAAGTGCAAAGCCCCTCTCCTTCTCTCTCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0198500.1 | 3 | 4005009 | A | G |
| Osa03LNT0198500.1 | 3 | 4002117 | A | G |
| Osa03LNT0198500.1 | 3 | 4002357 | C | A |
| Osa03LNT0198500.1 | 3 | 4003058 | G | A |
| Osa03LNT0198500.1 | 3 | 4003281 | A | G |
| Osa03LNT0198500.1 | 3 | 4003543 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0198500.1 | osa-miR5830 | Cleavage | 4.5 | 11.11 | 1 | 24 |
| Osa03LNT0198500.1 | osa-miR395c | Cleavage | 5.0 | 14.594 | 1 | 21 |
| Osa03LNT0198500.1 | osa-miR398a | Cleavage | 5.0 | 21.488 | 1 | 21 |
| Osa03LNT0198500.1 | osa-miR169r-3p | Translation | 4.5 | 16.502 | 1 | 21 |
| Osa03LNT0198500.1 | osa-miR1849 | Translation | 4.5 | 17.409 | 1 | 21 |
| Osa03LNT0198500.1 | osa-miR1858a | Translation | 4.5 | 8.66 | 1 | 21 |
| Osa03LNT0198500.1 | osa-miR1858b | Translation | 4.5 | 8.66 | 1 | 21 |
| Osa03LNT0198500.1 | osa-miR1861g | Cleavage | 5.0 | 15.076 | 1 | 22 |
| Osa03LNT0198500.1 | osa-miR395x | Cleavage | 3.0 | 14.594 | 1 | 21 |
| Osa03LNT0198500.1 | osa-miR5073 | Cleavage | 4.5 | 16.524 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0198500.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0198500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0198500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0198500.1 | 3 | qCR-3 | Physiological trait | Source activity | C25 | R518 |
| Osa03LNT0198500.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0198500.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)