© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0199400.1
CACGTCTTAAATAATTAAATATGGTCATGTCATATGGCAGGGCGAGGTGTTCCGATAAATCAATTGAATAAATCTATATACTCTGATGTACCCACTAAATTCCGCTTGTTGGGATAAGCCTACTGTTCAATGCTCATCCTTCTAATGTGCCTATCTATCTTTGACTAAGATCACAATTTCACTTTAACACTGGAACATCTACATAACTCTCTACAGGCCACCATGCTACTCAACAAATTTTCTTGGTTCCATCATCGGATGGAAAATCTTTATTGCTTTCTTCATCAGATGGAGGTGGCACACCAAATACCCAGTCAAGGACATTCAGGTACTTGGACCGAAAAACTTCTCTTTCTTGAGCATAGCAGTGCATGATGATCGACGTAGCCATACTGAATACCACCACGTCGGCTCGTTTTATCTGCAGAATTGGAGGGCAAAGTCCTGCATCGGTCATGCATGTGAAAAAACTCTCAATAGCTCTCGCGAAGCAGTACAGGGCTATCTCGATTCGCCTGCTCTTCTTCTCAATTAGCAGTGCCAGACCTGTGGGAAACGTGGCAAGTACAACGAGTGGAGTATTGCAGCTCTGGAAGATTCTGAAAAGCAGGCACGTCCATGCCCATGCAGAGGCACAGTACACTGAGAGGAACAGGCTTGATCTCGCTGTTCCTAGAAGATTCTTCCCTATTATTGGGTAAGGCCTTTTCAATAAATCCTGTCGATGAACTACAAGTGCAGGAACTAAATAGACCGGAACATAGACAGGTACTGCTCTTCCATATGCTTGAAACAAGAATGTAATAAAATGCCCTGCACATGATTGATTTCCATGCACAATCGAGCAAGGGACTTTCATATTTGGATCTAACTTTAGGTCAACACCCACAGACTTGTAGTACTTCTCAATACCCGCTAGGTTAGAGAAAGCAGTGTGATTGACTACTTCTTTCACACCTTGCAGAATAGTAAGATCCTTCCCACCATGCTTATTTAGAAATGCTTTATAAGTTGATGGCAAACTTTCTTGACTTAAAATATAGGCAGATCTACATAAGAAAAAAATATTAGGCAAAAGTTACCCTCACACACTACCAAACATGCACCACAAAATGGTGAACAGCATATATACATGGTACTGACCGAAACCCATGTGACTCATGTTATATTTGATAATATAACAGATCAATTAATAAATTGTCATAGCAAGATAATAAGGAATTACTAATGATCAAGAAATCCTAGCGAATTCTTCATTATATAACAGTCTCAAATAATGCATTCTTTATATCCATATTAAAAAAATCCAGACTAAAGGATTTTAGACCATTTAAAAAACAAACTACATTCTGTTATCACATTTCGTACAGATGCTATACTAATTTCAAGCTTTGTACTATGTACTGTATATGAGTATCTCGTCCAAGGCTCCAAGCAACTCCATCCAATGGATAGCTGTCAGTACATTGAGTTATTGACAATAGGATCTAAGCAAAATCCAAACATACGACATGCACAACTACTACCTTCTACAGCCTAGATATTCATAGCAAATATGAGAGAACTTACAAAATTTGTGCAGATGAAAGGCACATAAGGAAGATGTCACCATGCGACCAAGTCAAAGGCTTGCAAATATTTCCAAATCTTTTGCTCTTTATTCCACAACGGGATGCAAGGACAGCTGCACGCATAAGAATGTATATTGCCAAGCTAGTATGTTGTGTGCCTGGCCCTGTCAAGAGCATCGAAGGACCAGCAATTAACCCAGCCAATAATGATCTCCACCTTGCTGTTCTCTTACGGCCCCAGATGCCGGCGATGCACTCGTCGACGGAGACGTAGCTTCCGGCGAAGGTCCCCAGGAACAAGCCGTACCTCACCGTCTCCTTCAGCGCTAGCACCACCGCCTCCTCGTTGGTCATGGCGCCCACCTTCCTCGATCTGGGGGAGCGGCGGCGGCTGCGGAGGCGGACGAGCACGGAGAAGAGCGCGAGGCCGCCCTTGAGGCCCGCGCCGATGGCGAAGCCCTTCGCCGCCGCCTCCACGCACCGCCGCAGCCACCGGAGCTCGCCCTCCACCGCCGCCGGCACGGCGGGGAGGTAGTGGCCGGCGCGCGGGGTGCCCCCCGGCGAGGCCGCGGCGCACCCGCCGTTGGCAGCGCATTTGAGTTCCTCCGGCGAGGTGGGGGCCATGAGTTCGCCGGAGATGGGATCCCCCTCCGCGGAGTAAAGAGGAAGATGCCTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0199400.1 | 3 | 4720794 | A | G |
| Osa03LNT0199400.1 | 3 | 4720834 | C | G |
| Osa03LNT0199400.1 | 3 | 4721550 | C | T |
| Osa03LNT0199400.1 | 3 | 4722042 | A | T |
| Osa03LNT0199400.1 | 3 | 4723840 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0199400.1 | osa-miR5526 | Translation | 4.0 | 16.966 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR6251 | Cleavage | 5.0 | 10.293 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR7693-3p | Translation | 5.0 | 17.555 | 1 | 22 |
| Osa03LNT0199400.1 | osa-miR396a-5p | Cleavage | 5.0 | 19.224 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR396b-5p | Cleavage | 5.0 | 19.224 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR396c-5p | Cleavage | 5.0 | 19.224 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR164e | Translation | 4.5 | 24.769 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR418 | Cleavage | 4.5 | 7.718 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR396e-5p | Translation | 4.5 | 16.412 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR2120 | Cleavage | 5.0 | 9.227 | 1 | 24 |
| Osa03LNT0199400.1 | osa-miR396g | Translation | 4.5 | 16.412 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR396h | Translation | 4.5 | 16.412 | 1 | 21 |
| Osa03LNT0199400.1 | osa-miR396d | Translation | 4.5 | 16.412 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0199400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0199400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0199400.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0199400.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0199400.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)