© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0200100.1
AGTAGAAAACCACTCAGTGATACATCAAAACCATCCAATGCTAGTTTATATAATATACAGGTATGTTACAAGTCAAGTCCCCAAACAAACTATACCGCACTGTTTCGTCAAACGATCTGTACAACAACCTATACAATATACATTGCTCAAGGAGTGACAACATAAAATGCATAGCTCAAACTGTCATGGCTACAACATACAACACAAAATAATCACCCAATGAGGACAAACCAGCAAAGAATCATATAGTTACGTTCTTGAATACCGATGTAATTCAGGTTAATAAGTTCAGTAGTGAGCACCAGTCACGCCTCCCTGCTAGTTTCAGAGTCTTCTGAGGAAGGCGGTGAGTTCAACCTTCTTTCTATCAATCCTGGCTCAGCTCTCAGGTTCCTTTTGATATCTCTGCAATCCTGAAACCTGAAGCAGCATGACAGATGGTCGTTAACGATGCCAGAAACCTGCATGAAGGAGTAGATTGTCGTAGGGCCAACGCATTGGAAGCCTCGTCGCATCAGGCCCTTGCTTATGGCCTCAGATTTGGGCGTCTTGATAGGTACTTGGCGAGCATAGCGGAAGTTGCTTTTGACGGGTTTGTGTTTTACGAAGCTCCAACAGTAGTTGCTGAACGATCCGAAATCCTGGATTACCTTATGCATTTGCTTGGCATTTGTTACAACAGCCCGTATCTTTTGCTCCGAAAGTAGCATGTTTCCATTTGATTTCGACAAAAGGTTTATCTTCTTGTCCGTGAACTCAGACACTGATGCATAGTTGAAACCATCAAACATCTCCCTGAATTCGTCCCTCTTGTTCAGAATGATAGGCCAGGTGATTTCAGCTAAGGCTTGTGATAAGGTAAGCAGCTCAAACAGCTTCTGGTCATCATGAACTGGAACTCCCCATTCTTCATCATGGAAAGCAACATAAAGGGGTTCAGAGTTGACTGTGATCCATGAACACCTCGTCTTCCCCAGCTCCGGGCTGACAGGAGACGGCGGTGGGCTCCTACACCTCGCCGACGAGACGGTCCCATTGCAACCTCCCTTACCCCTCCTCCTCTGCTTCTCCACATCCTCTACCTTCGCCTTCGGCTCGACCGGCGCATTGGCTGATCGTACCACCTTACCCATGGCAGTCGTGGCTACCCAGGAAGAAGCTCCGGTGAACGACGTCCGGACACGGCGGAGCTCTGGCGATGGGATTGCCGGAGACTCGGGCCTTAGGCCTGGCATCTCGGAAGCAAGCCTTTGAGCTCTGCAATTGCAGTGATTTGGAGCAGGCGCGGGGATGATCGGCTCGTAATAAGGATTTTTTGAAACGTCTGTGAGAGGACGGAACTGCCCCTGCCTGCAAATCCCGAACGCTCTGGCAGGGGCAGATGCGTCATTTGGATTTACGGCGTCGTCGCCTCGTCGGCAAGGTCGGTCGCGTCGGGCTGGACGTCGCGGTCGGCGGCGGGTGCAACGGCCTCGGCACGACGAGGGATAAGGGGATTTGGTGCCTTGGGTCCAACGCCTCGTGCCGTTACGCACAAGCGTTGCCACACGTAGAGGCATAGAGCTGATGCTGCTGCTTCTCCATTCTGCTGCTCGACACGCACATTCTGCAGATGCACTCCTCCAATGAGAATGGCAAAGGCTGTGTACGTCAAGAAGAGAGTGACACGAGAAATAGCCTTGGCCATAGACACCATTATATTCTATCAAGATTTTGTACCAATTGACACGGGAATGTTTGGTACAGGATGGATCCAAATCCAGAATAGGGGCTCAAGAACTAGTGGTGAGGTATTTGAGCTGAAACCCAGCGGTGGATGGAATTTTGGTCATTACCAATCTGTTATCTGTATATGCTACTGTCTCTGAGACTCTGTCTGCCTGCGTCAGTAGTACAAATCTGAGAGGTCAAACTGCAGCGCAGCAACTGTATTCCACGAGTTCAGCTTGTGGTCTTCGTCATAACCTGAAAACCGATGATCCCACCGTCATGTATTGAGACCGGCATGTGATCTCTTCCTGGAAGTTAATTTTCTCCTCCACCCCTTTATATCTCCTTCATGTAACAAGTTGATGATTTCAGTTCTCTTCACCCCTTCATCTATTCACCCTATCCACCTCCACCATGGGTAAACTTTGAGAAAAAAAAATCACTTCCAGAGAAGAGCATGCCTCCAGGTATTCAAAGCGTGGATTGTAGTCGTCACCTCGCGGGCTTGCAGCAATCACTCAGCTGTGCACATCATGCTCTTGCTTATTAAAAAAGTACATTGCATCCTGAAAACGGAGTGGCTCATTTCCCCAAGAGGTCCAACCAGAAACCAACTCTCTGGCAAAAAGCTCAATGCACCTTGCAGGTTTAGGACCTGGTATATATTCTGAAAGTAATTTCTGGAGGGGAGGTTTCCTTGAGTGAGCACCTGGTACACTCATAATTACCCGCCTTTCTTCCAAAAACTTGAATTTTGAACCTCGTACGGCCTCTTTGTTAAGATTTATGTAGCCAACAAGGAGGCACTCATAAGGCCTGTGATGGAGCAAGTCTAGATTGCCAATCAGCGAACCATCTGGCTTCACCTTCAGCCAATAGAACACAGTATGATCTTTCACTCCCCAAGCAGGAAATAACTCCTCCTCAACAAACTTCCAAAGTTTCTCCCGATTTGTAATCCACAAAACTAGAAGAGCTCCAGCTGGATGGGCAAGTTCTTGTACTGGAAGGTACAAGAAATGTCTGTTGGGAAGTGTAGGGTACCTAGCGCGTGAATAGTTGGATGAGTGAAATGCCTGGATGACAATATATTTAAAGTGATTTCAAATTGAACGGATGAAAACAATAAAGTAGAAAATGAGTATTTGTTAATATACAAATATTTAATTTTCATGAGATTACTCAATATATACTCAGCTCAGAGTTTACTATGGGAGGACGTAATATCAGCATAATATGTCTCGCGGTCAGTGCATCATAGTATAATAATCCGTGTAATCCGTGAGACATGATCATGTGCATTGCATTCCTATGAAAAAATTTCAAGAACTAAGACATGATATACCCTAGGGATTGCAAATGAAACATATCGGAGCCATACCAAAAAGGTCAGCACATCCTAGATACCCCATATGCTTATCATGATTTATGCATCGGCTGAAGATCAGCTAAAGAGAACAACTGCACCTACAGTTTTAGTGGCTAAACATAATAACAAGCATAAACAGGACATGTGTTCAATTTCAAACATGTCATATATATAAAAAGTTAAAAAGTGATATCTGAGACTACCATGTAAAGATTATAATGTCATCCATCACAATGTGAGCCAAAGCTTAAGTGGTTCCCCATCTAGACACAAGCTTTTGCTTGCTTGGAGGAGAAAAGAGATTTTCTCTAAGGAAATGCCTAACTACACAAACGAATCAAACCCAAAAAGTAGCAAACTTACGCTACTTTCTGACGAACACATCCATTCTCCCAAGGTGGATCAACAACTATAAGGTTGTAACCTTGATTGTAATTATCAGGAATTAGACCACGGACATGTTTGAGGTCAGTCATCAAGAAACAACATCGTCTTGGTAAAATATAACGTCTATCCTGAAATTCTCCTTCTGCGTCATCATTTTCTTCGATACTGATTGTACTATTAAACAGTGGAGTGGATGTCTTATGGCAGATACCTTCCTCACTATCCTCACCAGAAGACTTCTGAAAGCAAAGAGTCATCTCACATAAAGGCGCTCGCCATGAGCTCCCAAGTTCAACAAGATTCTTCTCCAAATTACTTTCCACATCAAGCATGCGCACATCTTCCTTGATCATCCTCGGAAGGAACTCCAGTAGATCTTTAGCCTTAAGCAGTGATTTGTGTGCGCTCGATAGCAAAGGCCTTGCTTCCTGGTGCCGAGCTTCTGCCATCCGCTCCACTTCGTTCAGTTCCCTGGGCTTCGGCTGCCGCTGCCGCTTCCGCTTCCGCTTCTTCCGTTCTGGAGACGCCTCCCCAGTTCGTTCGGTTTCCGCTTCGCCTCCCTGACGCGACGTGCCGAAGCTTCGGGAGTAGTACGCAGAAGGGACGAGGCGGAAGCGGCGGTAGGACGCGTTGAGGATGCGGACGGGGTCGAGGAAAGCAGCGCCGGATTCGGCGAGACGGTAGATTCCGGTGGCCTCGAATGCCCGGAGCTCATCGGACTCGGAGATCCCCATCACCGGCGGCGGCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0200100.1 | 3 | 5202341 | A | G |
| Osa03LNT0200100.1 | 3 | 5200967 | C | T |
| Osa03LNT0200100.1 | 3 | 5201596 | A | G |
| Osa03LNT0200100.1 | 3 | 5202028 | A | G |
| Osa03LNT0200100.1 | 3 | 5203064 | A | C |
| Osa03LNT0200100.1 | 3 | 5203343 | C | T |
| Osa03LNT0200100.1 | 3 | 5203730 | T | C |
| Osa03LNT0200100.1 | 3 | 5204496 | A | C |
| Osa03LNT0200100.1 | 3 | 5204544 | T | A |
| Osa03LNT0200100.1 | 3 | 5205234 | T | C |
| Osa03LNT0200100.1 | 3 | 5205750 | G | A |
| Osa03LNT0200100.1 | 3 | 5204390 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0200100.1 | osa-miR5538 | Translation | 5.0 | 9.53 | 1 | 22 |
| Osa03LNT0200100.1 | osa-miR5538 | Translation | 4.5 | 15.229 | 1 | 22 |
| Osa03LNT0200100.1 | osa-miR426 | Cleavage | 5.0 | 5.866 | 1 | 21 |
| Osa03LNT0200100.1 | osa-miR1429-3p | Cleavage | 4.5 | 20.438 | 1 | 21 |
| Osa03LNT0200100.1 | osa-miR444b.2 | Translation | 3.0 | 17.734 | 1 | 21 |
| Osa03LNT0200100.1 | osa-miR444c.2 | Translation | 3.0 | 17.734 | 1 | 21 |
| Osa03LNT0200100.1 | osa-miR1440a | Cleavage | 4.5 | 23.033 | 1 | 20 |
| Osa03LNT0200100.1 | osa-miR1860-5p | Cleavage | 5.0 | 10.978 | 1 | 21 |
| Osa03LNT0200100.1 | osa-miR1860-3p | Translation | 5.0 | 18.938 | 1 | 22 |
| Osa03LNT0200100.1 | osa-miR1860-3p | Translation | 5.0 | 24.06 | 1 | 22 |
| Osa03LNT0200100.1 | osa-miR2120 | Cleavage | 5.0 | 14.442 | 1 | 24 |
| Osa03LNT0200100.1 | osa-miR2868 | Cleavage | 4.0 | 10.663 | 1 | 20 |
| Osa03LNT0200100.1 | osa-miR2919 | Cleavage | 4.0 | 8.892 | 1 | 19 |
| Osa03LNT0200100.1 | osa-miR2919 | Cleavage | 4.5 | 6.205 | 1 | 19 |
| Osa03LNT0200100.1 | osa-miR5162 | Cleavage | 5.0 | 18.392 | 1 | 24 |
| Osa03LNT0200100.1 | osa-miR5507 | Cleavage | 4.5 | 9.334 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0200100.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0200100.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0200100.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0200100.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)