© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0200200.1
CAAGTTGATTTCAGTGATTATTGGCATACAAATTTATCGGTATAAACATGCAATGAACCAACAATATCAACAGTTCCAGATTGAGCATAACTCTTGCCATAACAATATCAGCAGTCCCGGATTGTGGCAGTAAAAGGCTTTTCGAATCAACGAGGGAAAGTTAAGATCCCCTCGGCGGCTCGGCCCTCTCAAGTTTTATTTGTAATAATTCAGACACAGACTGATGGAAGCATGAATTTCCAGTTATTGAACCAGTCAAATTTCCTAAGTCCCAAGCATCCCTCTTATAGCTCAGTGTGCAACTCTTTTGCCGCAAAACACCCACCCAGAGTGGATCATGTTACTCAACTCGGATCTGCTTACAGAGAATCTTAATTGTGGACCTTGAGCATCTTAGTTTAAATCCATAGCAGAAGATTGAAGAAATGCCACAGTGCTGCTACCGAAGTTTCCACTAGCCATTTCTTCTGAGAGAAGGGGAGGTTCATCAGGAATCTACCACCCAGAGAAATCCTTAAATTCTACATTAGACACACTCGCTTTTCTTTTCTTGTTTGAATCATCTGCAACCACATCAGCAAAGCCAGCTGTCCGAGCTTTTAGGTACTTGCCAACGCCACCACCAGAGCTAGTTGAACCAGCAACGCCAGTGCCTGGATTGCTATACCATGATCCCACCTTATCATAATCCTCATCCTTTTTCTTCTCCTCTTCCTTTGCCTTTTCTTCTTCTTCTTCATCTGGTTCCGTGTAAGGGTTCACAAATACACTTACTTTTAATATCTTTATTTCCTCCAATGGTCGATCGTCATCATCAACAGGAACCTTTTCCATAGCCGAAAGAGTGGTCAAGCCACCGACCACCATGCCAAATACCGTATGCTTGAAATTTAAATGTGGTGCGGACTTGTACAAGATGAAAAATTGGGACCCATTGGTATGAGGCCCAGAATTAGCCATGCTGACAACACCTCTTCCTGAATGTATAAGTTTTGAATTCAGTTCATCCTTGAAAGGTTTACCCCATATGGACTCCCCTCCACTTCCTGTGCCAGTTGGATCACCTCCTTGAATCATGAAATTTTTGATACTACGATGGAAGATAAGACCATTATAGTAACCATTTTCACAATGTGTGAGGAAATTTTCACATGTCCGAGGTGTTATATCACAATGAAGCTCCAAATTCAAATCACCATGGGTGGTATGCAACTGAACATATCCCTTCTTTTTTGGATTCTTTTCAACCTTAACATACTCAAGTTCATTTTTGGTGACAGGATCATAGGCAGTTGATGTGAAAGAACGTGAAGCTGCTCCTGTGGTGTAACGGCTTTTAACCAGTTTAGCATTTACAGGAGCTCGATCTCCTGCCATGTGCATTGCTATTCTAGCAGCTGTTTTCTCAGCAGTAGCAGCCTTTGCTGCGGCTGCACTTCTGCCATGAACAGAAGCAGAAGCAGCATCTACAATACTGAAAGGCTGATGAGGTTTAGGTTCTTTGCCAGATTTTGAGTCATCCTTCTCCTTTTTTGCCAATATAGCAGCAAGTGCAGCAGCTCTTTCCTTTTGAGCTTTCTGCCCTCCCCCACCATGCAAAAAAGCTAACTTTCCCTTTTCAGTTCCAAGTTCCTTAATCATTTGCTTAAGATCACCAGAAATATTTATGTTGTAGGTTGGATCATTTTTCATTCGTTGCAACTCTTCATCTTCAAGTTTGAGGCCTTTCTTGACATGGTCAAATTCACCTAGGATCTTGCTATCAACCGCATTTGGATTCTGAATTGTTATCAAGTCATTTCGTGTAAAGGGCTCATCAGTTAGCAATTCTCTCCAATTCTTTGGCTTGATGTTGAGTTCTTGGATTGCCTCATAACAGAAGACGTTCCCAGTAGTCTTTACAGCAACTATATGCGTGAATTCTGTAAAAACTTTATTCAAAACAGGGCACTGGAACTCTCCATCTGAGTTCTTGTGGAATGTTAAAGGCATTAGATCTTCCTGCTTGAGTGGTGTTCCTGTTACTGGGTGCTTCCCGAACTTCTTAATGTATGGAATTATGCTCATCAAATCAAAGACGCTTCCATCTGCTGTGCACACTGGATCCTCAAATGGTAAAAACGTAAGCGCGCAGCAGTAGAAGGGAAGGCGCTTGAAGGGCGTGCCGGCCTCCTTCTGCTTGGCGCCGCCCCACTCCGTCGCCCACTCCGTCCGCGTTATGAACATCCGGTCCTTGCTATGCTGCTTCTTCCCCATCTCCGATGAGCCTACAAGATCGCGCCTACAGCCGGTGGTGCTGGTGCCGCTGCTTCTGCTGCTCGCCGGCGGCGAGAAAGAGGGGAGATTTGACGGCGAGGAGCGTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0200200.1 | 3 | 5297353 | G | T |
| Osa03LNT0200200.1 | 3 | 5297702 | T | G |
| Osa03LNT0200200.1 | 3 | 5299475 | A | C |
| Osa03LNT0200200.1 | 3 | 5299897 | T | A |
| Osa03LNT0200200.1 | 3 | 5299904 | C | A |
| Osa03LNT0200200.1 | 3 | 5298035 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0200200.1 | osa-miR5534a | Translation | 5.0 | 22.23 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR5534b | Translation | 5.0 | 22.23 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR5539a | Cleavage | 4.0 | 7.787 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR5539a | Cleavage | 4.5 | 4.886 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR2873c | Translation | 4.0 | 12.31 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR5539b | Cleavage | 4.0 | 7.787 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR5539b | Cleavage | 4.5 | 4.886 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR164a | Cleavage | 4.5 | 24.649 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR164b | Cleavage | 4.5 | 24.649 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR166a-5p | Translation | 4.0 | 11.473 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR166e-5p | Translation | 4.0 | 11.473 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR164d | Cleavage | 4.5 | 24.649 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR164f | Cleavage | 4.5 | 24.649 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR390-5p | Cleavage | 4.5 | 15.01 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR1425-3p | Cleavage | 4.5 | 9.696 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR1852 | Cleavage | 5.0 | 15.112 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR1858a | Cleavage | 4.0 | 19.743 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR1858b | Cleavage | 4.0 | 19.743 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR1876 | Cleavage | 4.0 | 11.909 | 1 | 24 |
| Osa03LNT0200200.1 | osa-miR2118f | Translation | 4.0 | 23.929 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR2118h | Translation | 4.5 | 23.929 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR2118j | Translation | 4.0 | 23.929 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR2118k | Translation | 4.5 | 23.929 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR2118m | Translation | 4.0 | 23.929 | 1 | 22 |
| Osa03LNT0200200.1 | osa-miR2921 | Cleavage | 5.0 | 15.35 | 1 | 24 |
| Osa03LNT0200200.1 | osa-miR166g-5p | Translation | 4.5 | 11.425 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR1858a | Translation | 5.0 | 4.707 | 1 | 21 |
| Osa03LNT0200200.1 | osa-miR1858b | Translation | 5.0 | 4.707 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0200200.1 | 3 | nan | Morphological trait | Dwarf | RG100 | RG450 |
| Osa03LNT0200200.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0200200.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0200200.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0200200.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)