© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0200400.1
GAGTAGACATCATCTTACAAGAACACTTCGGCCTTCGATAGGCATTTTAATGGGAGGCAAATTGTTTACTCTTGTTCTTAGTTCATGGATCCTACATCAAGTAAACCGAGAATATCAGGCACATTTTCTTAAATGGAAGAAGAAAACATTGTCAACCCCAAAATTCAGCCAGCTGCATTTGAGTGACGCAGCATCAGGATAGACGGTCTGACAGCATTCAACACCAATGACACCAAGTAGATGATCACCTATCTAGCCATTGCAAATATGACCAGAAAGCAATCCCAAGCAGTAGCTACAGCGCCAACAATGCTTCAATTTTTGCAATCTGCTCTTCTTCGGTCTTAGGAGTAGGGCTTCTATTTGTTTGTTCATAAAGGTCATGCTTCCATTTTTCTGCTTGATCACCAGCAGCCTGGTGCATGCTGTTTCGCCCATCATATGAGTTGTTAAACCTGTATCTGCCCCTTCCTCTACCAGCAAAACGCCCCCATGAATCATAGCCATTTCTTTGGCCAGCATTCCTGTGATCAGAAAATCCCCTCCTCATACCTTGACCATCTGGCCTTACGAAAGGTCCCTCATGCCTATCAAATCCCCGTGGGTGATAATTTCTCCTTTCTTCTCCTATTGCAGAGGTAGGCCCAGCTTGATCATGTTTATGTGACCTTGAATCTGGTTCTGTAACAGAAAGCACAGATTCTTTCCCCTCCAGTGGCATGCCCATCTCATTAAATGGTGGCCTTCTTTTGGCAGGGTGAGCTTCTTCCTCCAACTGGAAGAACCCATCATGCTTCCATGTAGATTCACCATCATTTTGTTGTTCATCCTGCATAGCCTTTCCTTCATCTTTGTTTTTCTCTCTATCTCCAACATGCTCCTTTTCATCCCTTTGTCTTCCCCGGTCACTAGCCTGGCGGTAATAGCACCGACCACCTTGCCCAGCACTGCCACGTTCATCGTGCTGTACATACAAGCATAAGTAGCCTAATGTTGTCAAATACAGTGGGCACTTGTAGGTATATGCCATAAACAAAGTCCCACAACAACACAAGGTATATATTACTCATGCATATTGAGCTGACGCCAAAGACATAACAACAAACCAATATCCTCGCTGCATATTTTTGAACTTCGCAACACTATGAGAAAACAAACATTAACATGACAGCCATTGCAATAATAAATAAAAAAAGGACCCAGGAAACAGTAAATTTAACCAAAATCATATGCAACTACTTAAAATTGGAAAATATTACAAGAAAGTACTCCCCACAGCCTACAAAATGTATAAAGAAGGAGATCAAGATGTCAATTCGTTTTAGTACAACAATACAAGATCAATTACAATGTTAGCTACCACCACCACTACCCAAAAAAGAAATATATGATTTAGAGATAAATTAGTTGTTGCTTTTTCTAGAGGAATTACTTACTACTTAGGAAAGAACATCTGTTTAAGCTCATTCTGTGTAAACCTAAATCACAATATGGAGGAACAGCTAGCAGACCATGGATCTAACTAATATATACACTTGACTCTAATAGAAGAAAAATGTAACATTGAAATAGAAGAACAATATATATATATATATATATATATATATATATATATATATATATATATATATATTGGCATATTGCTACATACTCTACAAACAAACACAGGAAGTAACTTGTGACACCCAATATTTCAGTTAGTGGTGATCACTTGTTTAGACAATACTATATTGGATATGTGAACTAAATATAGAAATTAAATGAATTGGCTATTGTGCAAGCTTGCATATTTTTTAAAAGGGCAACAGAAAGATATTATATAAGTAGAACCAGCATTTATAATTGTTACTGTCTGGGCATACGTATGCAAACATACAAAGCCAGGCTAGTTTGGTCTACTAGAACTTCCATTTTGTCTCTTTCCCACCCATATCTCATTTTCGATCATTGGTATCCTGTGTGAATATGTCGCAATGAAGCACTCGAGAGCCAAGAAACACCACATTTTTCACAATTTCCCATGGTTTCTCAGAAGAAACCCGACATATCATATACACTATTGTTTGCACATTGTAGCACCAGCAGCTGGGACCAATGGATTCATGGCTTTTAACTAAAGCTAGCTACAAATGCTACATTCGGCAAAGCTAGTAGGGTTGCAGAACCAAGAACCATCCTGCTTACACTGAAAGTAGCTACCAAGCACACGGTTAACAGCTACCAAACAATTGGAAGCAAAGAGTGTAGTCCCTTGATGCACATTTGAGAAAAAGACAAGAACCTGAAAGAACGATCGAGGCCGCCTAGCATCTCTTGATTCAGGAAACCGTTTGGTTCCCCTAGGAGATCTCTCATGCCTGGCAGGAGAGCCATTTCTGGCATCATCTAGGGGCTTCGTCTCCGCTCGCAAAGGATCATCGGGCTGCGCGGCATCTTGCAATGGCCTATCCCTCTTCTGGTCACGGTCAACTGCCTTAGCACTTTCTTCAGCTCGACTCCTGTGGCGATGACTTCTGTCTGATTCATGATGCCTCCTGTCCTCTCTTCTCCTCCTCGGACTGGGATCGTCCCGCCGCGACCTGGACGAGGAGTGGGGGCGCCTCCCGTGCGTGTGGTCGCGCTCCCGCTCCCGCCGAGACGCGTCGTGCTCGTCGCGCTCTCGCCCCTCCCGCCGAGACGCCTGCTGCGACTCCCCCGTCGCCATTTGCGCCTTCTTCTTCTTCTTCCTCTTCTCCCCTTTCCCACCGCCTTCTCCACCCACACAGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0200400.1 | 3 | 5394953 | T | C |
| Osa03LNT0200400.1 | 3 | 5395670 | A | C |
| Osa03LNT0200400.1 | 3 | 5395676 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0200400.1 | osa-miR6245 | Cleavage | 5.0 | 13.302 | 1 | 21 |
| Osa03LNT0200400.1 | osa-miR396c-3p | Translation | 5.0 | 2.788 | 1 | 21 |
| Osa03LNT0200400.1 | osa-miR399d | Cleavage | 4.5 | 22.642 | 1 | 21 |
| Osa03LNT0200400.1 | osa-miR399i | Cleavage | 4.0 | 22.642 | 1 | 21 |
| Osa03LNT0200400.1 | osa-miR399j | Cleavage | 4.5 | 22.642 | 1 | 21 |
| Osa03LNT0200400.1 | osa-miR408-5p | Cleavage | 4.0 | 3.512 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0200400.1 | 3 | nan | Morphological trait | Dwarf | RG100 | RG450 |
| Osa03LNT0200400.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0200400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0200400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0200400.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)