>Osa03LNT0200900.1

TACCAACCGGGACTAAAAAAGTTTTGTTTGTTTTCTTTTCCTTTCATCCGGTTGGCCTTTTTCCTTTTGTATTGTTCTTTAGCTTTCGCTCGTGGATCAAATGAATAAAATCAACAACAGAGCCTAAATCATAGATCGAATGAATAAAATCAAACAACAAAACATCCATATTCTTTACACTTGTTCAGATCTACAACATCTTCAGAACAATGAGCATTCATCACAGAGAACAAAGAGAGCATTCATCACAGAGAATAGAGAAAGAAAAAAGAAAGTTCACATCTACAACATCTCCAGCATTCATCAGATAGCATAGAGAAAAGAAAAAAAAAGTTCTCCGCCTGCCGCCGCCGCCCTCCCGACCGGCGCCGGCTGTCCCCGACGCAGCCGGCTGCCGCCCTCTCGACCGGCGCCGGCCACCGCCACCTCGACCGGCGCCAGTCGCCCCCATCTCGCCGCCCCGCGCCCGATGCAGCCGGCCACCGCCCCTCTCGACCGGCGCCGGTCGCCGCCGCCCTCGATGCAGCCCGCCGCCGCCTCCATCTCGTCGCCTCGCGTCGGGCCGCCGCGGAGGCCTCCATCCCGTCGCCCTGTCCGGGGCCGCCGTGGCCGGCCTCCATCCCGCCGCCCCGCTGGAGGGGAGGAGAGGGGAGGAGGAGATGGGGTGAGAGAAGAAGGAAGAGAAGGATGGGAGGAAAGGAGGAGAGAAGAAGATAAGATGGAGAGG

Explanation	CPC Score
noncoding (weak)	-0.794378

Transcript ID	Chromosome	Locus	Ref	Alt
Osa03LNT0200900.1	3	5665460	G	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa03LNT0200900.1	osa-miR6253	Translation	4.5	14.526	1	22
Osa03LNT0200900.1	osa-miR419	Cleavage	4.0	9.234	1	21
Osa03LNT0200900.1	osa-miR2120	Cleavage	4.5	12.09	1	24
Osa03LNT0200900.1	osa-miR2925	Cleavage	3.5	21.515	1	19
Osa03LNT0200900.1	osa-miR5491	Translation	5.0	11.834	1	21
Osa03LNT0200900.1	osa-miR419	Cleavage	2.0	10.567	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0200900.1	3	S34(t)	Physiological trait	Sterility	nan	nan
Osa03LNT0200900.1	3	qOE3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0200900.1	3	qTA3	Physiological trait	Eating quality	nan	nan
Osa03LNT0200900.1	3	qTNL-3	Morphological trait	Culm/leaf	C563	R518
Osa03LNT0200900.1	3	Gy3a	Others	Others	RG266	C63

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus