© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0201400.1
TGGAGGGTACAATCTTGCAATCGCCTATCATTCCATTCAAATATTGCATCATATGGAAATATCTTAAAAGCAAGCGCATGCGCGGGGAGCCTTTTCCGATAACCGTCTTTTATTTGCCTTTTCTTTGATCTTTTTCTCATCGTTATATTTCCTTTCCTCTGCCATTGTCCTTGCTCCTCCAGCAATTTTGTTGATCCTTGTTATTTCCTGGCTGTATTCTTCTAGTGCCTTTGCTCTCTTTTGGTCCAACACTTTCTCTTTTTGCTCTTTTTGGCGCTTAGCCTTCACCTTCTTCTCATTCTCCCATTCAGCTATGGTATCCATCATGTTCTTATACTCTTCCGTAATGCTAGCGAGCTTCGCCTTCTCCCATTCATTAGTTTTGGTGTCTGCTGGGCCAACAGCAGTTAATCCAACAGTACCATCTCCATTCCGTCTAGAATGATACGATGTTGCTGGCCTTGTGGTGGATGGGGTCTTCTGAATCACCTGCTCTTGCTCAAACTTCTTGCTCCCTTTCTTGTCTTGCAATTTGCTAGAGGAACCCGAACCTTTCTTCGCGCTCAGAGAAGAATCAACCATCTTGGGTGGCACCTTCTGATCTGAAGCTATGTCCTCTTGCTTTCTTTGTGCTGGTTTAAGTGGCCTCCTTACAGATACATTGGCTGGTCCATCGTCATTGTCTTCAGCAGGCTCTTTGCCACTAAACCATCTTGAGATCTTGCTGCCTCCTGTGGGTTTTTTCATGCTTTCACCTCTCTTTACTGGAGACTGGACAGGAGGAGTAGTAGATTGCCCCTGAATGGGGACAGGCTTCTTCTGAGCTGCTAGCTTCTCTTCTTGCGAAGCAATTGCATATGCTGCTGCAGCAATTGTGGCCGCAAATGCAGCATCATATCCATCGCTGCTATTCATCGGTGCTCTTTGAAGAGATGTGTCTTCTTCTTGCAGTATTGTTGGAGCCTGTCTGCCACCTTTGTTTCCCTTTCCTAATCCAGGAAATCGAACCCTTAGCTTCTTCAAGTCGCCGTCCATGGCGCCCAACGTATTTGTAGAGAACGAATAGCTCCAAGGAAGAACAATCTTCAGAACTAAGCGAAGTCCTGCGTTTTAAATATTGCTTTGCTTGTATTCATAGGTGGTGAAGAGAGGCAGAGAACAAGGAAGCCATTTTTTGTATTGTAGAAAGGCAAGAGGAATGGATATGGGATTGCTTTAACCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0201400.1 | 3 | 5814511 | G | T |
| Osa03LNT0201400.1 | 3 | 5814650 | A | T |
| Osa03LNT0201400.1 | 3 | 5815480 | A | G |
| Osa03LNT0201400.1 | 3 | 5815742 | G | C |
| Osa03LNT0201400.1 | 3 | 5815958 | G | T |
| Osa03LNT0201400.1 | 3 | 5815961 | T | G |
| Osa03LNT0201400.1 | 3 | 5816346 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0201400.1 | osa-miR396a-3p | Translation | 5.0 | 16.371 | 1 | 20 |
| Osa03LNT0201400.1 | osa-miR396a-3p | Cleavage | 5.0 | 10.115 | 1 | 20 |
| Osa03LNT0201400.1 | osa-miR396b-3p | Translation | 5.0 | 16.371 | 1 | 20 |
| Osa03LNT0201400.1 | osa-miR396b-3p | Cleavage | 5.0 | 10.115 | 1 | 20 |
| Osa03LNT0201400.1 | osa-miR171d-5p | Cleavage | 5.0 | 16.347 | 1 | 21 |
| Osa03LNT0201400.1 | osa-miR815a | Cleavage | 4.0 | 8.848 | 1 | 21 |
| Osa03LNT0201400.1 | osa-miR815b | Cleavage | 4.0 | 8.848 | 1 | 21 |
| Osa03LNT0201400.1 | osa-miR815c | Cleavage | 4.0 | 8.848 | 1 | 21 |
| Osa03LNT0201400.1 | osa-miR1441 | Cleavage | 5.0 | 17.293 | 1 | 21 |
| Osa03LNT0201400.1 | osa-miR5513 | Translation | 4.5 | 12.216 | 1 | 21 |
| Osa03LNT0201400.1 | osa-miR2275d | Cleavage | 3.5 | 14.465 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0201400.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0201400.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0201400.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0201400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0201400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)