© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0201500.1
AAGAATTATCTGCACATTTTCAATATGTCAACAAGTGTAACAATGTCCTGTAGGTTACTCACAAACAATGGCATCTCTACTACAATCATCTCCAACCTACCAAAGCAACCACAAAACTAACAGAACAAAATTTCAAGGACTCGAGTATATCAAGAAGGAAAAAAAGAATAAAATGAGGGGGAAAACATATAAACTCTCGCGACCTCATAGTGGCTGCCTTCTCTTACTTCGCCATGATCAATTAATCGATCGATCGATCAATCTGTGCTACCCTCCGCTGCATTATTCTGCGGTCAAGGATTTAGCCCAATCCCACAGAGGGAGACTTCACCAAGCTATCCTTCGCAGTTCATAGTGTCGAAAAGAATGATGCGCCAATATGATACAGATGAAAAGAATCGTGTAGCCATATATGATACAGATGAAAAGTCTCGAGTATTTGCATGCCAGTCGATCCAGGGCATAGTCAGGTATGTTCAGTGCTGATTGTGTTCTGGTTGTTAACGAATTGACCAATCTTCCCACCATCCAACAGCAATCAGCCTCTCCAGTGAACAAATGAATCACAACCGGTATGATATACTCCAATGCGCCTACCCCATTTCCCAGAAGTCACTCTTTATCATACTGGGGCTCCAAAATATGGCAGTTTCTAATAAAGTCATTGGAGTAATTTACGTGCTTTGTCCAAAATGGTTGTAGGTTCTTAAAAGCAATGTCTAGCCATGGCTTGCACTGGCCATTGTAGTGGATCACTGCAGATCTCCTAACACCCTCAATGTCTGTATTTTCTTGGTATCCTAGGCCAAGCATGTGCCAAGATGGATCTATGCCATGCAGGTGGCCCCTGAATGCTATTAGCGCAGGCGGCAAAGTGCCAAATTTCCAGAGAGTAAGACCAGATTTTAGATTCTCTTTCAACCAGAAATGGTATGTCTCTCTGATGTTTGTCTTCCTCCAAGCTGCCAAGTCAAATATATTCATCCCATATGCCCATGCACATTCATCTGGGTCAAGACTCCGAGCTATCACAGGGTGGGAAAAATTGAAATATGTCCTGAAGCGCTTAGACATCACCCAGTTATCTTCTCCTCTGCAGGTCTCCACAGCACCATTCACCTTCCCTTCGAGATTGATCTTCCAAAGGGGAGACAAATCACGCTGAATAACAATGTCGTCATCAAGAAAGACCACCTTGTTGAGGTTCGGAAAAAGCTCAGGCAAATAAATGCGGAGATGGTTAAGCAGGGATATGTATTTGGGACTTCGAGCCTGCAGCTTTGAAGCAAGCACTCTCGGACTGTCACTTGCACTAGAAACTGCCGCATGATCTCCATGGTAGTGATTTCTGACTCCACGATGGTTTTCTATAGCCTCTAGTACTGGAACATTTTCTCTCGTCAACCAATCAAACTGGTGAACACCTTTCACTTCAACTATAGCAGGTGATATAGAATTAAGAGCAAACCAAGAATGCATCCCCGGATACGTTTTCTTATCAGTAATAACATGAAATACTACTTTATGAGGTACTGACGAAGATCGGACAGTTGAGCTCACAACAACTGAAGCAGCAAGGATATTATCACTGGCTAGAATGTAATGTTGGAATGAATTATCAGAAAGTAAAGGTAACAGTTCAGGTGGTGGCAACTGTTTCCGAGCATGAGCATTTGAGGAATATTCATCAGTAAGACGCAGAGACAGGCAATGTATGCCCTTGGGAATAGCAGTTGCAGCATAATGTTTATATAATTGCTCTGCCAGCCTTAACTTCTTTACTTCCTTATCCATGTTTTCCATCTACAAAGAAGCACATAAAGTGATCAATATATTTCACATGCAGGATGCAAACATCAGAGTGCCTCATCAGGGTTAACAGTATATAAGACATGAATAAGCTATGTGGTGCCACCAAAGCCAAGTTCAAAATTCTAGCGACCAGTATGACAGTATCAAATGACCACCAGCAGCAAAACTGCAAAATACATTAGGAGCAGAATCACATGCTCCAAAAATGTTCGGCGTGAGAAGTGTGTAATGGAAATTTTATACCAAAAATGTAAAACGTGAGATGTGTGTAATGGAAATTACGTACCAATAGCTGCAAGACATCCCACTATAAAACACAAGCGAAATAATTTCTTTCAAAAAATAAGGGTACAACAAGTATATCATCCCTACCAAAAACATTTGAAAACAAAATGTTGCTACAAAGTCATGGTTCATAAGCAAAGGTCACTCTTGTATCACTCTCTCCTTCAAACTAATTTTAAGGCCCATCTGGGTGGCTGAGCGGGCATAATTGGATATCAGGCACTTGATCTAAATATCTAATTCCTCATGCAGCTGTTTATCATGAATTAATAATGCATTATTTTCCTATAATTTGTCCAGGAACACAAAGACTTCAGACAATATGCTACTGTCAACTACAAAATGTGCATCACAAAATCAATTTGGTTTTAGAAGTTAGCTGCTTTAATGAAAGAAGTTATGCACCACTAAGTTTTCAAAGAAAAAAAAAACTTTGATTGTTAGTTCCATACCGTAGCTTTCAACCTAACAGCAAATGTTCTAGCATCGTAATGGCTATCCTTCATCTCCAGAAGAAAGTCCCTGAATGATTCTGGTATTCTTTTATCATCAGGAGATTCTTCATTGTTAACCTGATCAAAAATCCTATACAGATCTTGCACCAGCCTCATAGAATCACCCCCCTGCCTACCAAGGAAACTAGGCCCTATTCGCCTCCCCAAGCAATCGATGGAGGAGCACTTGCTGCCGTCGGCCTCGAGCGCCGGCACTGCGGCGAGGATGAAGGCGAAGGGCAGGAGGCAGCCGAGCGCCACGACGGCCGGGAACGCCACGGCGCGCCAGTACCACCCCGCCCCCCACCACCCACCGCCACCGCCACCTCCCCCTCCCCCGCCGCCACGGCGGCCCGCGCCCGGCGTCACCACCCCCTGCAGCGCGAGCGGCGGCGGCGGCGGGGGCGGCTGCGGCGCCACCCGCACCTTCATCGAGTCGACGACGCCATTGCTGCTCGAGATGGTGATGCTGCGCATGCTCGGCGAGATCCGCAGCTGCATCCTCCTCCTCCCCCGCCGACGACGGGAGCTCCGACGACTCCGGCTCCGGCGACGGCGACGGCGGCGGCGGCGGCCTAGGGTTCCGGCGACGGCGGCGAGGCGGTGGCATTGGGCTGAGACATGCTAATCGCACGGGTGGTGATACTAAATACGCAACCAAAATAACACCAAAAAAACTAAAAAAGAGATGGGAATAATAATAATAACAATAATAAATGGAATAATGCAGGGCGCCGCGAGCGAATTCGGGATTAGCTCGGGGGCCTAACAGCTAATTTGGCGGGGGATTTTGGGGGCTCTCGCCTCTGGAGCTCGAGAGATTGGGGGATTTTTGAGGAGGGGAAGAAGCGGATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0201500.1 | 3 | 5832624 | A | G |
| Osa03LNT0201500.1 | 3 | 5833322 | A | T |
| Osa03LNT0201500.1 | 3 | 5833480 | A | T |
| Osa03LNT0201500.1 | 3 | 5834039 | T | G |
| Osa03LNT0201500.1 | 3 | 5829856 | A | G |
| Osa03LNT0201500.1 | 3 | 5830514 | G | A |
| Osa03LNT0201500.1 | 3 | 5830653 | T | G |
| Osa03LNT0201500.1 | 3 | 5831410 | A | G |
| Osa03LNT0201500.1 | 3 | 5832619 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0201500.1 | osa-miR5820 | Cleavage | 4.0 | 15.625 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR5820 | Cleavage | 5.0 | 23.992 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR5837.1 | Cleavage | 5.0 | 14.187 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR319a-3p.2-3p | Cleavage | 4.5 | 13.821 | 1 | 20 |
| Osa03LNT0201500.1 | osa-miR319b | Cleavage | 4.5 | 13.821 | 1 | 20 |
| Osa03LNT0201500.1 | osa-miR167e-3p | Translation | 3.5 | 20.098 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR167h-3p | Translation | 3.0 | 20.098 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR167i-3p | Translation | 3.5 | 20.098 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR440 | Cleavage | 5.0 | 16.86 | 1 | 24 |
| Osa03LNT0201500.1 | osa-miR1429-3p | Cleavage | 4.5 | 13.15 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR1429-3p | Translation | 5.0 | 12.94 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR1435 | Cleavage | 4.5 | 21.204 | 1 | 20 |
| Osa03LNT0201500.1 | osa-miR1857-5p | Cleavage | 5.0 | 19.912 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR1319a | Translation | 5.0 | 14.87 | 1 | 24 |
| Osa03LNT0201500.1 | osa-miR2094-5p | Cleavage | 3.5 | 22.283 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR2869 | Cleavage | 3.5 | 10.832 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR5147 | Translation | 4.5 | 16.95 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR5487 | Cleavage | 3.5 | 8.845 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR5511 | Translation | 4.0 | 18.379 | 1 | 21 |
| Osa03LNT0201500.1 | osa-miR2275c | Cleavage | 5.0 | 5.479 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0201500.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0201500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0201500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0201500.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0201500.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)