© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0202100.1
TAACTCAAAACGTAAAGCACGACACATCTCAAGTTACACAAGTCTGTTATTAATAAATTAACCAAGGCACATACCTAAACAATGGACACAACAAATAACTTAAAACATAAAGGACAACACACCTTAAGTTACAAAATTAAATACTGGGTAATAATGATCCGACATCCAAGTTACCAACCATGGCAACGGCTGCAAGGCTCCCGGACATTGAACTTGACTGTAGAGGGAATTTTCCCCTCGATGTATGTTCGGATAGCCAAGAGCGAATTATGCACTCCCTTGATAACATCCTGATCCAATGGGAGGCAGACATCGATGTTGCCGTCAGAACACCGAAGTTGAGTGCAAAGAGTGTCCAATGTAAGGCACTCAAGGGACGTTGTATTTTCCATAATATGACATATTAGCTCAGCCAAGCTTCTTGTGGCACTGAAACCAGTGATCTTCACATTCTTAAGCTTGTCGTGCCGGTGTTCGGGGATTTGCCTTAGACATATGGGATCCTTAAATGTCAAGTCATGCTTCTCTTTCTGTGAAATACATAGGATGAAAGTCTCCAAGGAAGGAGAAGCATCAAGAAAAGATGCAAGAGAAAAATAATCATAAGCCCAGGAAAATCTCCATGTTGCAAAAGTAATCCTCAAGTATCTAAGGTGGAGGAATTTGCCAGGGCCAGTTGGTGTATCCACCATCTCCTGAGTGATTTTTCATTATGCGGTCAACTTTGTTGTTGTAATCTCTAACTATCCCACCCTTTTTATGTGGCACTTTATTCAAACCCATCGTTTTCCAACTGAAAATGAGGTTGGGATGACACCTCCAGAAACGTAGAAAAGCCTGAGACACGCAAGCAGCACGGGCAGCATCTTGCAGTGGCAACAAGGAATGTATATGGTGCCATATGTCCTCTGGAAGGTCCGGACCTGAATATCTCATTCTCTTCACACATTGAGAATTATCTTGTTGGCAGGGAGATTCCTTTCTTTTAGCACATTGAGCAAGAAATTGATAGGTTTCGATTTGGAGACGGCGCTGCTCCCGCCTTAGGGACATTAACCGATTCAGCTCATGTAGTCCCCTGGCGCGATGATATCTCGGATCTAGTCGAGAAATCGGAGGCATCGGGTCGGGGGCACCTCAGACTTGCCTTCTCTCCCGCTTCCTCTACTGATCTAATGTCTTTCTCCTCTCGATTCTCTGATTATTTGAACCCAATGCTGCGCTCGCTTACAATTTCTTTCTGAATCAAACGAGACGCGAGGGGAGGAAATCGAGTCGGCGCCGCCGGGCCGGGCGACCTACCAAGCCTACTCATACTAGTATACTACTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0202100.1 | 3 | 6222362 | A | G |
| Osa03LNT0202100.1 | 3 | 6218192 | G | A |
| Osa03LNT0202100.1 | 3 | 6219413 | T | C |
| Osa03LNT0202100.1 | 3 | 6219791 | T | C |
| Osa03LNT0202100.1 | 3 | 6219854 | T | C |
| Osa03LNT0202100.1 | 3 | 6220160 | G | A |
| Osa03LNT0202100.1 | 3 | 6218543 | G | C |
| Osa03LNT0202100.1 | 3 | 6220195 | A | G |
| Osa03LNT0202100.1 | 3 | 6220221 | A | G |
| Osa03LNT0202100.1 | 3 | 6221291 | A | G |
| Osa03LNT0202100.1 | 3 | 6221799 | T | C |
| Osa03LNT0202100.1 | 3 | 6221809 | A | G |
| Osa03LNT0202100.1 | 3 | 6221845 | T | C |
| Osa03LNT0202100.1 | 3 | 6221952 | C | T |
| Osa03LNT0202100.1 | 3 | 6222930 | T | C |
| Osa03LNT0202100.1 | 3 | 6223122 | C | T |
| Osa03LNT0202100.1 | 3 | 6224807 | C | T |
| Osa03LNT0202100.1 | 3 | 6219820 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0202100.1 | osa-miR166b-5p | Cleavage | 5.0 | 20.696 | 1 | 21 |
| Osa03LNT0202100.1 | osa-miR2118a | Translation | 4.5 | 24.621 | 1 | 22 |
| Osa03LNT0202100.1 | osa-miR2118f | Translation | 4.5 | 24.621 | 1 | 22 |
| Osa03LNT0202100.1 | osa-miR2118h | Translation | 3.5 | 24.621 | 1 | 22 |
| Osa03LNT0202100.1 | osa-miR2118j | Translation | 4.5 | 24.621 | 1 | 22 |
| Osa03LNT0202100.1 | osa-miR2118k | Translation | 3.5 | 24.621 | 1 | 22 |
| Osa03LNT0202100.1 | osa-miR2118l | Cleavage | 5.0 | 24.621 | 1 | 22 |
| Osa03LNT0202100.1 | osa-miR2118m | Translation | 4.5 | 24.621 | 1 | 22 |
| Osa03LNT0202100.1 | osa-miR5496 | Translation | 5.0 | 18.264 | 1 | 21 |
| Osa03LNT0202100.1 | osa-miR5795 | Translation | 4.5 | 20.184 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0202100.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0202100.1 | 3 | Rhz2 | Others | Others | OSR13 | OSR16 |
| Osa03LNT0202100.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0202100.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202100.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202100.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0202100.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)