© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0202200.1
GAATCCATATATGAATACCCACCATTTGCCAGATGATCTAATGTTTATCAACAGCTAGCAAAAAAAAATGCTAGTTCACCTGTCTATCCATCCACAACACTTATTACAGTGTTACCCCACCATGATTTCCTACGTACAGGTGCAGATAGGCTACACATGGCACCCCTGTGTTCATTCTTTGTAAGCCTTCTGAATTATAATGATGACTACAACAACTCTACAAGCCCACATGAAGAAGGGGGGTGGCATTAGCCATTTTACTGCTAAAGGTTATAACTTTGCAGGATTACCAAGCGCATATACAAGACAGGGGATAACTCAGAGAGGATCCTCCTGTTTGATTTCGGTGTCATCTTCTATTTTCCCAACTTTAGTTGGAAAGTGAGATAGGACCAAATGCCCCTCGGAATACCCATTCATCAGGAGCTTTCCTATCTTTGTCTTCCAATCTGTGCCAGATCTCTCGTTCCACCTGTCATGAACTACCCGGTCACGGTAATTGAGCATTGTGCCAAGCCCAGAATTTGGTACCCAACCATATTCTTCCAAAACCCGCGCCTCTCCTTCCGTCAAATCTTCACCAATCAATAATGGCCTATTTTCAATCAGAGCTGTCCTGCCACAACCACTAAGCTTCATTGCAGTAACCATCCTTTGGATCTGCCATTGTATTGGCAGTGATTTCACAATCTCAAAGAAGTATGTCGCATACCCATATTCCGGTCGCTCAAGAACAATCCTGTTATGGCTTTTAAAAATAAAAATAAATGATTGCAGGTCTCTACACCATCCCCATTCAACAGGACAATCACGAAACTGAAGATAGCGGGACTGCTCGATGAGAGAAATTAAACAGGTCAAGCAGTATATAGCCTTTTCCCCCTTCTCATGCCTAAGTGCAGATTTCAACAGGGATGTTCTTTGCGGAAACAATTTTGTAATAACATTTTCAAGATCTTGAAAGTCACTTTCTGTGCAGTCTGGGACCATATCATCTTCTTCTTCAACACCGTAGAGTTTAATCTCTTTAACCAGTATTCCTTTGTCCAGAAGAATCTGCAGTAGTCCTGGGGCATCTTCTTCAAGTGCCGTTTCAATTGAATCCGTTGCTGTTTTTCTCCTTCGCCTTTGACGAGAAAAGTAAGCAGTACCCTCATCATTTCTGAGGGAATCTTCTTCAAGCGTCTTTTCACTTGGATCCCTCAGAGTCTTCCTCCTTTTCCTTTTTCGAGAACAGTAAGCAAGGACCCCGTCATGGTTTAGAGTATTGGTTTTTTTGGCAGTGAGCTCTGCGATACTGATAGAAGTGAGACCACACACAACTAGAGGTAACTCACTCCCGGTAACTTCGCTTTTTATTCGTGATGATGGCAGTAGGCCTTCAACATGAGAATTCTCTGGGTTAGATCTTGCTGCTTCTGATATTCTTTTGGAGATCGCTGAAGAAACAGAGTTTATAGACCCAACTAGATTAGAGCCCTCAGTGCCATGATTTGGATCTGTTCTCTGTACAGAAGATGTAATTTTCTCTGTGAAATCCCCTTCCAATGCAGGTTCCAATTTTATGTCAACCAAAAGGGTCCTATCATCTGTCCCTTCCAACTGAATGTTTTTATCCCCAAAAGTTGGTGTTGAACTTGAAGAAGGGTCGCGACTATAAATAAGAGTCTTGCCGTTTACCAATAGATCATGAGAGCACACAACTTGACATTGTGGTGGAGCAGCAGAAGATGATGTACTCAAGAAACCTGATTCACATCCAGCCTCATGACTTTGCTGGTTGTTTGAAAGACCTTCAGTTAGCAACCTCCTGTTGTTATCATTGTCGATACTACCTATAATGGCCGGTGCAGAAGAAATTTCCTGCAACATGCTATACATACCATCCCTGAAGGCAGTCCCTTCATGAATTCTTTTAGGAATCATCCCATTAGTTCCAGGCTTGCATGAATTCTCCAAACCATCAATTGCACATTGTTCAGAAGATACTACAGCAGAGGAAGAATGATTTTCTGCCATAAGAATTCTGTAGCGCTCTTGCAGAGACATATGATCAAGCTCCTCGATTTCATCATGATCATTAATTTGGTTCCCAATATGCATGTTGCTTACCACATTGAAATAACTTAGTTTGTCCAGATTAGGACATGTCCCTGTTTGCGTCTGCTTTTGCTTGTTTTCATTGCCTTGAACAGAACTATTTTCAGTAATCATATTAAAAGAATGATTGTCCAACTGTAATTCCTCTTTGGAATCATCATCGATTGCAGAAGCACCCTGTGCTGACTGAGCGTGAGATTTCTCAGCCCATTTAAATTGATTTTTTTCTAACTCGTAGAATATCTTTGACACCACCAATTCTCCCTCATCTTTCTCTGTGCTTTCGATATGATATTGATGTAATCTCCAGTCAGTGATCTGAGGATTGTTACCATCTGTCTCGTAGGCATACAATACAAATACTTCCTTGCAACCTTGAAGATTCCCATCCAAAGTTATTGATATAGGATTTCCACTTTTTTGCCATCTGATACATTTACTGTTCTCATTGGCGCACTCCTTGAAGTTTTTGTGAAAGAAATATGATGCACATCCATCCTGCCTAATACCTGGTATATCTTGAGGGTGAGTATAACCAAATCCTATGGTTTCATCAACAGATTTAATAAACTCGTTGATAAAAGGATGACGACGAGCCTGACCATTTCCAACTTCTGCAGCCAGATGCCAGAGTAGATCGCTATCGGTAGGATTAAACTCTACACCTCTGGGAAGACCTGGCCAACCCTGCTGCGCCGCTCCGCCGGAATCCTCCGCCGCCGCCGCCGCGGCGCTAGCCTCCCGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0202200.1 | 3 | 6358963 | G | A |
| Osa03LNT0202200.1 | 3 | 6358787 | T | C |
| Osa03LNT0202200.1 | 3 | 6359390 | A | G |
| Osa03LNT0202200.1 | 3 | 6360410 | T | C |
| Osa03LNT0202200.1 | 3 | 6360525 | T | C |
| Osa03LNT0202200.1 | 3 | 6360541 | G | A |
| Osa03LNT0202200.1 | 3 | 6361679 | T | C |
| Osa03LNT0202200.1 | 3 | 6362245 | T | G |
| Osa03LNT0202200.1 | 3 | 6359145 | A | T |
| Osa03LNT0202200.1 | 3 | 6363359 | G | T |
| Osa03LNT0202200.1 | 3 | 6364153 | T | A |
| Osa03LNT0202200.1 | 3 | 6364673 | T | C |
| Osa03LNT0202200.1 | 3 | 6358210 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0202200.1 | osa-miR5541 | Cleavage | 4.5 | 18.079 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR5790 | Translation | 5.0 | 12.431 | 1 | 24 |
| Osa03LNT0202200.1 | osa-miR1319b | Cleavage | 4.5 | 14.127 | 1 | 24 |
| Osa03LNT0202200.1 | osa-miR5836 | Cleavage | 4.0 | 16.817 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR5512b | Cleavage | 4.0 | 16.194 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR530-3p | Translation | 5.0 | 20.415 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR530-3p | Cleavage | 5.0 | 8.44 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR535-5p | Translation | 5.0 | 13.514 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR395v | Cleavage | 4.5 | 5.718 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR1852 | Cleavage | 4.5 | 13.944 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR1878 | Cleavage | 4.5 | 16.063 | 1 | 24 |
| Osa03LNT0202200.1 | osa-miR5147 | Translation | 5.0 | 15.233 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR5339 | Cleavage | 5.0 | 13.342 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR5491 | Cleavage | 4.5 | 15.573 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR5492 | Translation | 4.5 | 13.443 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR5494 | Cleavage | 3.5 | 17.691 | 1 | 21 |
| Osa03LNT0202200.1 | osa-miR5512a | Cleavage | 4.0 | 16.194 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0202200.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0202200.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202200.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202200.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0202200.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0202200.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0202200.1 | 3 | Rhz2 | Others | Others | OSR13 | OSR16 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)