© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0202300.1
TTGACAAAATTGCAGATCCACTCCTCCACACTCACTATAATTCTGTTATGTACAATTTTTAGATGGGAAAATTTTCTGATAACTACAAAGGGCATAAGAAGCATATATCTACACGGGCAACTAGTAACAACCTATACAGATTAAGAACTAAATACAACCCCAAAGAATGAACGAATATCACTATGTAACTACAAGAACCAACATATCAAGATGTACACTTTACAGGTAAAGATGAAGATGATGATACAGAGTAAAGAGCTTTAAGTAAAGAAATGAACTTCACAACTGTTTCTTCAGAGAACCACTTGAGTTTCCATGTATGCACTGTGTAAATTTCATCTGGTTGCTTGCTCTGTGAATTTGTAATGCTACCGTTACTGCAAAATCTTCCTTCATGTGCATGGTTGTCCAAAACTAATGTCAAACATCTCTTGTCACAGTGATCCACAACCACTTCTTGAATATCGTTGATAAAACAACAAGCATCCAGAGAAAAATATGGAGTATCCGGATCATCAGGGAGGGAACCAAACTGATGTATGTTCTCGATACACACAAATAATGACCCTTCAGTAACAGCGAGGGATCTAATAACAAAGGATCCTTCTGCAAAATAGAATGGACACTATTTCAGCAAGTTCCAGTTGACAGCAGACAAATAATGAATTAAGGTAACTGGAACAATCCTCATAGTTTTCATATGCCAAAATTGGAATATGACGTCAGTGGTAAAAATGCAGATAAAAAATCTGTGGTAAACTATTATAGTTTTCATAATGACCTCCCTCCCTACTTAGCTTATACAATAGTCATGCATACTCCTACCTCCTTTACCCACCTTTTTCCAAAGAATCCCACTCTATAAGGCTTCAAGGAAAATCTCAGACACACCCAAACATAATTTAGAACCATCAAACATAAGATAACGCAGGGACCGATCTGTTCTTAGTCCAGCCACAGAATAGTGTGCTGTTTCATCAACCAAATAATGCTTACCTTCAGTATCATTCTTCCAAAACATCAACAACGAGTAGAGAAATATTCCCATTTCCAAACTTGGATGGATACAATTCTCAAGCAATTTAAGTTGGACCTTCTCCCAGCTTTGCAAAGATATACTACTAGTTAATTGTGGAAAATTAGACGCGGTTAAGAGCCAAAGTATATCTTCTGCTTCCTTGGAAGTCCTTGTCAAGAATAGGTGAGTTGTATTATCTGCCATGTGTACCCTCAATGCTTGTAGACCCAGTCCGATCAAAATATTCTCCAGATCTTCCATCCAATAGCTGCCCAAAACTCTTAGCATAGTGTCTTGTCCATCTTGAGCCATATCAACTAGCACAACATGTAGTTTATTTTGAGAACATCGCAGCAAGGCTACCTCTCTTTGAACCAAATCACTTCCAGTGCCATTTTGAAATATGTATCCACAAAAGGCTGTCTTTTCACAAATTTCAGATGCGTCGCTTGCAATTTCTAAATTGAAGAAATCCTCAATAAGCTTGTACTTTTCAGTGTTACAAGAAACTGTATTGGCACTGGCACATAAGTTATCCTTGTGCAAGATACTTGAATTATGGTTTTCTAAGCTGTGTTCCCTGCAAAGAGTACAGTTGTTCAGGTTGCATCCCAGATGGCCGTTCCCTGCAACTGAAACCCCATTATCCATTTCATCTCCATTGACCTTCGGAAATACAAGTTTAGTGCCATTATGATTCTTAAAAAGAGGAGGTATCCTCATCTTAAACTTCTGGTTACTCTGTTGTCTGACCAAATGATCTGAACCTTCTCCTAAATGCCCATTGCTCTTGTACCTATCATGTAACTGCTTAATACCAAACTCAACGGAATCTGTAAAATTTGGGACATCCTCTGCTGAATAATCAGGCAAACCTTTCTTCCCAGAAAAATATTCCATTCCATCCTTTTCCTCATAATCACCTACAGAAGAAAACCTAGCTATTTGACCATTGGGGGACAACTCCATTTTTGTTCGAATTGCAACACAATCATCTTCGGAATTGCATGAACATAAATCACCTGAAGAGTCATCACTGCAACTGCTACCACTACCAAGCGAACCAGCACAATTAAAGTCTCCCGAAGTCTGCAAAACCTCTTCCTCCATACAAAGTCTTCGATGCAGAATGTCCTCCTTGTATTGTGGGGGTGACTGCGGACTAGAATTTGTGAAGGATAGACTCGGTTCTACCAGCTTGTTCATCAAATTTGATGAAACTCCATTTGTATGTAAGTTTCCAGTGCCATCTTCCATCTCACAAAAAGAATCAGCATGCGAAATGGCTACAAAATTTAGTGGAGGAAGTTGCTGGGAAGAATTCAAGTGCAACTTTAAAGGAGCCTGGTATATATTCCCTTCATGTGAGGATTCTGTGGTAACACCATTAGCACTGTAACATGCACCATCAGTGAAAGATAAGTCAGATTCCAAAATGTTTGAGCTGCTCCCACCTTCTGACGTCTGTACCAAGTCTGAGATGTCCTTTGAGTTCTTTTGAGCTTTCTGCATTTTCTTTTGTTCCTCATACCTTCCATTGCTACTGTTGAACTCTATGTAAAGGTTGTCAGGTTCTGTATTCTCCATGTTTTCATCCATCCACTCCTTAAATTCACGCAGCCAATCAGTTGATTTCTCTTTCTTCAATAATTCAGCTGTATTGATCAACGAAGTAATTTTTATGTCATTATCAGCACCTGCAACTTCATCCTTCTTAGAACTGTCACTTTCGTGGGGGGTGGTCTGCTGGTCCACACCTTCATCACAAAGACTTCTCTCTTCCTCCACAATTAAGGCAAGTCGAGAAATCTTTTTCATCTTTGAATTTGATGTGTCTTCATCCTCATGGTCATCTTTTGCAGGAAAATAAAATCCATAGCCAGCAGGTTGCTTTTGCCTGCTTGAAAACAGTACTTGTTTTTCCCAGTACTCCTGTGTGTTCATACCTTTATCATCTAACTTCAAACTTTCTGAGTTGTGGAGAAAACTGAAAACACGTGCTCGATACCAACGAGCACAGCAGATTGGGTTGCCTTCCAACCATAGGTTCTGTAGCAAAAAAAGGCTACCAAGTATTTCCAGCTCCGAGAAATTTGAGATGATGTTGTAAGACAGATCAAGGTCCATAAGCGACTTTAGATTTTTGATCCCATGTAGTGTAGTTAAAGCATTATTTCTCAGTACAAGTTGCACAATTCGACCGCAAGCCTCACTCAAGGATGATATAGAGCGCAAATGATTAAATCCAAGATCTAGATTTCGTAGCTTTGTGCATTTCCGCAGATTATCCACCTTTGCAAACTGGTTCCGACTAAGATCAAGGGTTTCAACTGCAGGTAACAACTGCAATGACTCATCCATGAGCACCAGACCATTTGAAGCACATGATACATACAACAGCCGACCCCATACGGGTGAGTCCTTGATATCCATGATCCTGCTCGTGAAGATATGCCTAAGAGCATCCGTGGAATTGTAACAGATGAGCTTCTCGAGGGTGTGGCGGAGGTCGAGCAGGCCCCTGGCGGCGGAGGAGGTGGAGAGGTCGCACCCACGCAGCTCGAGCACGCGCAGGCGCGCGAACGGCACGAGTGATAGCGGCGCCGGGTCCCGCCCCGGCCCGGGGGCCACGACCTTGAGCGACGTGAGCAGGCGCAGGATCCGGCGGAGCTGCTCGAGCGCGCGGTGGTCGCCGAGGTCGGCGACGTAGGCGCGGAGGTAGTCGACGGGCGCGCCGGCGCCGACCGCCTCCAGCTCCCGCAGCGCCTCGAGGCGGGAGGCGACGTAGTGGAGCCCCACGGGGTGGAGTCGCAGGGTGACGGAGCCGTCGAGCAGCGCCCCGGCGTTGCGGCCCACGAAGCGGACCAGCAAGTCGAGGTAGCGGTCGCCGGTGACCGGCGGCGCGCCCCCCGCACGGCCAGCCGCCATCGCCGCCGTCGGGATCGGGCTAGGGTTTGGGGACCCGCCGCATCGGCGAATGGGGGCGGAGCGGACGCCGGGGAGGGAAGAGGTGGTGGTGGTGGTGGTGGCGACGGAGGAGGAAACGGACACGGCCGCGCTAGTATGATTGGGGACACGCGGGCTCGTGGGGGAGGGAACGGAAGGCGACGGGGTGCGGCCGTGCAGCCAGGCCGCGCGGTTGCCAGTGGGTAACTGGCAAGTTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0202300.1 | 3 | 6380367 | G | A |
| Osa03LNT0202300.1 | 3 | 6381820 | A | G |
| Osa03LNT0202300.1 | 3 | 6382267 | T | C |
| Osa03LNT0202300.1 | 3 | 6385087 | G | A |
| Osa03LNT0202300.1 | 3 | 6385717 | A | C |
| Osa03LNT0202300.1 | 3 | 6385738 | T | G |
| Osa03LNT0202300.1 | 3 | 6386784 | A | C |
| Osa03LNT0202300.1 | 3 | 6387194 | T | C |
| Osa03LNT0202300.1 | 3 | 6387317 | G | A |
| Osa03LNT0202300.1 | 3 | 6382338 | A | G |
| Osa03LNT0202300.1 | 3 | 6382773 | A | G |
| Osa03LNT0202300.1 | 3 | 6383577 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0202300.1 | osa-miR812v | Cleavage | 5.0 | 18.36 | 1 | 24 |
| Osa03LNT0202300.1 | osa-miR5807 | Cleavage | 4.5 | 11.214 | 1 | 24 |
| Osa03LNT0202300.1 | osa-miR5817 | Translation | 4.5 | 15.158 | 1 | 24 |
| Osa03LNT0202300.1 | osa-miR5827 | Cleavage | 3.5 | 18.97 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR1440b | Cleavage | 5.0 | 5.934 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR5079b | Cleavage | 5.0 | 7.928 | 1 | 22 |
| Osa03LNT0202300.1 | osa-miR529b | Cleavage | 4.5 | 10.58 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR1428a-5p | Cleavage | 4.5 | 14.975 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR444b.2 | Cleavage | 4.0 | 18.468 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR444c.2 | Cleavage | 4.0 | 18.468 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR444f | Cleavage | 3.5 | 18.468 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR1860-3p | Cleavage | 5.0 | 13.407 | 1 | 22 |
| Osa03LNT0202300.1 | osa-miR1874-3p | Cleavage | 4.5 | 24.529 | 1 | 24 |
| Osa03LNT0202300.1 | osa-miR2931 | Cleavage | 4.5 | 16.013 | 1 | 20 |
| Osa03LNT0202300.1 | osa-miR5079a | Cleavage | 5.0 | 7.928 | 1 | 22 |
| Osa03LNT0202300.1 | osa-miR5144-5p | Translation | 3.0 | 14.019 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR5337a | Cleavage | 3.5 | 12.183 | 1 | 21 |
| Osa03LNT0202300.1 | osa-miR5522 | Translation | 4.0 | 7.591 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0202300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202300.1 | 3 | Rhz2 | Others | Others | OSR13 | OSR16 |
| Osa03LNT0202300.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0202300.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0202300.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0202300.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)