>Osa03LNT0202500.2

GGTTGGAGTAGGACCGAGAAACCATGGCTTCTATCTGGTTCAAAGTTTTGGATCAAAGATTTGGGCTCTCGGTTGGGGAAGAACAGTTGCTGCTGGGGAATCCAAGAATTGCGAAGAACTGAATCCAAACAGCGCCGCAATTGGGGTTTAATTAGCCAAGAACAGAGCCGGTGTGTTCGGCTCACTGTTTCTTGCAGGAAAGTTGCACACTCGCACTCGCAGCAGTGGTTTTTTTTGGCCTTTCGGGAGAGGTGGCACACGCACCTGGATTCAACAAGCCTCCAAATGCCAGTATCCTCACTGTGCCCTTCTCTTTAATCTCGAATCAATATAGTTGTGGTTATAATACAAGGGAGAGAACCTTCTCTTGCAAATTGGTGATGGTGGTGTTCCTTTCCAAGTTCTAGCTTGGTTGGTGCAAGAACATGGGAGGCACTGAGAAACACAGCTCAGATACTGTCTCTGCGGTAAAAATCCAATCCTTTTCAGCTAATAATGACCATCAAGATTTGATCTCCTCACACAACAGTTGCTCCAACCCCGGACGATCTAGGGCTGCTCATGTCGTGTGAGAGGGAGCGAGGAGGGAGCAAGAAAAACAGCTTTTAATAGGAGAGGAAGGATGACTCACCTCATCACCAGCATCATCTCGTTGAGTTGTCCTTGGATTGATCAAACGACCGGGACAAAATAATCGCATGGGACAGCAGGAGTGATGGAGACTGCAAAATTTTTCTCTTCCTCTCTTTTTTGTGGTTGATGGATCAATTCAAAGGCGAGCAAGCGAAGGGAAGTACAAGAAAAGGCGCAAAAGAGACGCGAGATTATTCGGAGATTGAGAGGGGCTTTGCTTGGTTTGGTTTTGGTGGTGGCGTTTGGATCTTTCGGTGGCTCACAGTCACAGCCACGCAGCTGCTAGATTAGTTGAACTGAGCAAGAAATTTACGGAGGGGAAAGAGAGACCAGTGGCCGTTCCAATCAATCAATTTAAT

Explanation	CPC Score
noncoding	-1.17223

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa03LNT0202500.2	osa-miR5790	Translation	5.0	19.252	1	24
Osa03LNT0202500.2	osa-miR1426	Cleavage	3.5	17.647	1	21
Osa03LNT0202500.2	osa-miR444d.3	Cleavage	4.0	22.215	1	21
Osa03LNT0202500.2	osa-miR1858a	Translation	4.0	17.048	1	21
Osa03LNT0202500.2	osa-miR1858b	Translation	4.0	17.048	1	21
Osa03LNT0202500.2	osa-miR2919	Cleavage	3.5	20.438	1	19
Osa03LNT0202500.2	osa-miR5074	Translation	5.0	19.163	1	21
Osa03LNT0202500.2	osa-miR5505	Cleavage	4.5	13.901	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0202500.2	3	qTAA3-1	Morphological trait	Shoot/Seedling	C316	C63
Osa03LNT0202500.2	3	Rhz2	Others	Others	OSR13	OSR16
Osa03LNT0202500.2	3	S34(t)	Physiological trait	Sterility	nan	nan
Osa03LNT0202500.2	3	qOE3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0202500.2	3	qTA3	Physiological trait	Eating quality	nan	nan
Osa03LNT0202500.2	3	Gy3a	Others	Others	RG266	C63
Osa03LNT0202500.2	3	qTNL-3	Morphological trait	Culm/leaf	C563	R518

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus