© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0202600.1
CTCTAATGAATGGTGGCTGCTGGCTGGAAGGTGGAAGAATGGCATGTAGGTACCTGAAAGCTTAATCATTCGATTATGTGCAACTTCGTAGAAATATTATCTAGTGACATGTCACTATTCATATGCACAATGATACCAAGTTGGTCACAAAAGTATGTGGAGTACGTGTCTTTTCCTCTTAGCAGGTGACGGGTACCTAGTACGTATACTCCCTTCGTCTCAGAAAAAAAGGCAAACCCTGAATTTTCGTGTCCAACTTTGACTGTCCGTCTCATATGAAATTTTTTTATAATTCGTATTTTCATTGTTGTTAGATGATAAAACATGATTAATATTTTATGCGTGACTTGTCTTTTTAATTTTTTTCATAATTTTTTCAAATAAGACGGACGGTCAAACGTTAGACACGGCAACCCGGGTTTGTCTTTTTTTTTGGACGGAGGGAGTGTACCTACGCAGCCATCTACTTGCGGACTAAAGTCACCAGGCAAAGCAACACTCCAAGCCAAACAAGCCGACGCACGGCGGCGTCAGCTCGCCGCGAAACCGCGCCTGCGGGGATGTAGCACGAGCTGGTCTGCGGCACCTGCTGCCCCTGCGTCGTCCCCGGCACGCCGGCCGCCGTCACACAGTACCCCGTCGGCGTCATCCCTCTGCTCGGCTGCGGCGTGTTCTGCACCGTAACTGGAGTAACGGTGGCCGGAGCCGCCGTGCCGGGAGCGGCGGCGAGCCCGATGTCGTAGTTCGCCGTGAGGTCAGTCCGGTAGAGGCCGAACGACCGCTCGGACTCCGGCCCACCCTTGAGGTCCTCGTCGTAGAGCGCGAAGAGGTACGTGTCCACCGATTTGCCTGGCGTCCGCGGCGTGCCGACCTGCGACTTGAGGTGCGCGACGAGGTTGCCGTTGTACGCCCTGGCGTTGTCCACCGTGGCGCCGCCCTCGTCGGCGTCGCCCTTGTACGGCCACCCGGTCTCGGCGATGACGATGTCCACGCCGCTGTACCCCTTGGCGTCCAGCGCCGCGCGGATGGCGTCCAGCTGCGCGTCGAACATGTTGGTGTAGGTGAGCCCTGACCCGGCGTCGACGCGCCCCGGGTTCGGCTGGAACAGGCAGAACGCCAGCGTCTCCGGCCGCGTGTCGGAGGCGTAGGCGAAGTACGGGTACGGGTTGATCATGAACGGCGCGCCGTTCTGCTTCAGGAAGTCCAGCACCGGGTCCAGGCTCCCGGCGAGGTCGGCGTGGAACGCGCCCGACGACGGCGGGTCCGACGACGAGAGCACCGCCATGGAATGCACGGTCGAGATCTTGGTGGTTGAGCCGGCGGGGAGCGCGGCGAGGAGGTTCTGCATGGCGGGGAGGAGCTGCGGCGCGAGGGTGGGATCGCCGGAGTTGAGCAGCTCGTTGCCGACGGAGATGGCGGAGACGGGCACCGTGGTCGGGATGTTCGCGGCAGCCCAGGCCGACGCTGCCGCCGGGGAGGACGCGAGGTTGGGGACGTCGCCGTTCGGGACGCCGAGGAGGATGGAGATGTTGGAGCCCGCGAGCGCGGCGACGAGGTCCGGCTGGGGCTCGTAGAGGCGGACCTTGCCGATGGACGTCGACTTCAGCAGGTTGGCCGTCGACGCCGGCGGCGGGAGGTTGTCGGCTATCGTCCCATAGTTCACTCCGATGAACGACTGCGACGTTGCCAAGTGGAAGAGGAGCGCTTGCAGCAGCCCAGAGGTGACAGCAGCATCCAGCCACCTCCTCGCCCCCATGCCACCACTGCCAGCCAAGCTACTAGCAACAAGAATCCTACTGCTTGATGCAATCTCGCCGCAGCTTCTCAGATGTTCGAGTCCAATTATGGCTACTACTTGGGATCAGTGAAATGGTCGAAGACTCAAAGGAGCTCGAGTGGCAAACTGGCAATGGGAGAGGCAAAGAAGAAGACAAGGAGGAAAGAGGCCAGGAAGGAGGAGGAGGAGGCGAGTCGTCGATGCAGTCTTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0202600.1 | 3 | 6706633 | A | G |
| Osa03LNT0202600.1 | 3 | 6706748 | G | A |
| Osa03LNT0202600.1 | 3 | 6706419 | T | G |
| Osa03LNT0202600.1 | 3 | 6706575 | A | G |
| Osa03LNT0202600.1 | 3 | 6706602 | T | C |
| Osa03LNT0202600.1 | 3 | 6709163 | A | G |
| Osa03LNT0202600.1 | 3 | 6709375 | T | C |
| Osa03LNT0202600.1 | 3 | 6709680 | T | A |
| Osa03LNT0202600.1 | 3 | 6710328 | C | G |
| Osa03LNT0202600.1 | 3 | 6706601 | T | C |
| Osa03LNT0202600.1 | 3 | 6707606 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0202600.1 | osa-miR812p | Translation | 2.0 | 9.49 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812q | Cleavage | 5.0 | 12.352 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812s | Translation | 4.0 | 10.231 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812a | Cleavage | 3.0 | 9.49 | 1 | 22 |
| Osa03LNT0202600.1 | osa-miR812b | Cleavage | 3.0 | 9.49 | 1 | 22 |
| Osa03LNT0202600.1 | osa-miR812c | Cleavage | 3.0 | 9.49 | 1 | 22 |
| Osa03LNT0202600.1 | osa-miR812d | Cleavage | 3.0 | 9.49 | 1 | 22 |
| Osa03LNT0202600.1 | osa-miR812e | Cleavage | 3.0 | 9.49 | 1 | 22 |
| Osa03LNT0202600.1 | osa-miR1439 | Cleavage | 4.0 | 17.427 | 1 | 21 |
| Osa03LNT0202600.1 | osa-miR812f | Cleavage | 2.5 | 9.24 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812g | Translation | 3.5 | 10.231 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812h | Translation | 3.5 | 10.231 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812i | Translation | 3.5 | 10.231 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812j | Translation | 3.5 | 10.231 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR2096-5p | Translation | 4.5 | 17.533 | 1 | 21 |
| Osa03LNT0202600.1 | osa-miR812k | Cleavage | 2.5 | 9.24 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812l | Cleavage | 2.5 | 9.24 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812m | Cleavage | 2.5 | 9.24 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR812o-5p | Cleavage | 2.5 | 16.575 | 1 | 21 |
| Osa03LNT0202600.1 | osa-miR812o-3p | Cleavage | 5.0 | 11.862 | 1 | 24 |
| Osa03LNT0202600.1 | osa-miR5151 | Translation | 4.0 | 10.762 | 1 | 22 |
| Osa03LNT0202600.1 | osa-miR5161 | Translation | 5.0 | 16.756 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0202600.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202600.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202600.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0202600.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0202600.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0202600.1 | 3 | Rhz2 | Others | Others | OSR13 | OSR16 |
| Osa03LNT0202600.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)