© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0203400.1
CTAAAATTTTCATCTAAAATAAATCACCAAATGAACTACAAAGCAAATTCATGAGAGCGTTTAGCTAAGGCATCTTAACTTACATGGTCTAGTCTGTACAATGCATTGGATTCGATGAATGTAAAATCTGTTATTACTAACACAAACTGACCTTACCATGAGTACAGTCATCATGCTTTCTTGTATCTGTATCTCATTGCACAACCAGTGAAAACCAGTAAATTCACAAAGTTGATCCCAGCAATCAATGAAAAGAACCGATCTAGGTGGCCTTCATTCAGGTTATCTGGGATCCATCCAGGATCCCCTCCTTGAGTTGTAAAATATGACACCAAGGTTAATATGATTGAGCTTAAATAGCTCCCCAGTGAGACTGTTACAAGCGCAAATGCACTACACAAACTCCTCATGGCATCAGGGGCTTCATTGTAGAAGAACTCAACCTGACCTATGGCAGCAAAGACCTCAGCAGCGCCAACCAAGAAATACTGCGGTATTTGCCAAAGAATGCTCATCGGAACAGCAACATCCTCATGAATAAGACCTTCAGATCTGGCGATCCCTAAACGCCTCAACTCAACAAGAGCTGCAGATAGCATTGCAAGGATGGAGAGGGCTAATCCGATTCCAATCCGCTGTAACTCAGAGAAACCCTTCTCCCTTCCAGTGAACTTTCTAGCTATTGGCACAAGCACACGGCCATAAAACGGAATCCAGATGATGACACTGATGACATCAAAAGTTGAGAGGGATGCAGGAGGGACAATGAAAGATCCAACTCGCTTGTCAAGAACCATTCCCTGGGTGACAGTGCATAGCCTCCACGGATTTGTAAAGGAGTCACTCTTGGCATCATCAGATGAGATGATGGCAGCCTTGTCAAAGAATTCAAGTTCACTTGTGTGCTCCAGCTTCCGGCTTCCCTCAATCGCTGAAGTCTGGCCATCAACCTCATATAAAAGAGATGTATCATGTGGCACTTCAGTGTGCCACTTACGGAATGCTGCAACAACAACCTGACACACTCTTGTAAGAGGGCTTCCACCAGGTTTCTGAAATCTGTACATATTTGAGGCAACAAAGAAACTTGCAATCGCTAATGCCATAAATATAGTAGGAATGGCAAATCCTATCCCCCAACCTGAGTTATCTTGTATCCAAACTATAACGGTGCCTGATACAAATGCACCGATATTTATACAGAAGTAAAACCAATTGAAGAAGGAGCCCTTCTTTACTCTGTCTGCTGGATCACTGTCATCAAATTGATCAGCTCCAAAGGATGATACACAAGGTTTGATGCCTCCAGTCCCGAGGGCTATCATATAGAGGCCAGAGAAAAATACACCATACTGGAGTAAGCTTGCTTCTGGACAAATAGATCCTGAACATTTAGGCGGCTGCAGAGCTGGAACTGATGCTGACAGCGTCAAAGCAACCAGACCAATAAAATAAATTGCTGAGAAAGCAGCAATAGTCCAGTACTTTCCCCAGTAAGAATCTGCTAGGAGGGCACCAATGAGGGGTGTTAGGTAGCATGTCCCCTGCCAAGTTGTAACATTTCTTGCAGCTTCAAGGTTGCCTTGATGAAGATTTGTTTTCAGATAAGTAACTAGGTTCTTTGCAATACCATAATAGGCCAGTCTCTCACAGCATTCATCCCCTAGGATGAAAAAACATGCACGCCAATTTCCAGTGGCATGCTTTAATGCAGGGCGCCCTTTGATATCAACAGATCCATCTCCGGTGTAAAGATTAGCATCACAGGGTAGTCGGCGTTGAAACGCAGGCTGATGTTGAGCTCACATCACACTTGTAGCAGAATCAATTGAGGAGGTAGGAGCAAAGGAGCTGACGAAATCAACTGAAATTGCTGGATTGTAGAGGAAATCGCAGACGGCATGTGTGCCGGCAGAATCAACCGAGGAATCGCTGAGTTGTAGAGGAAATCGACAGACGGCGTGTGCAACGGTGAAATGAACCGAGGAATCGCGCACGGAGGCGCGCGATTCCGAGGAGGATTCGCTAGGATGCGGAGGAAAAACTGGGGGCAACGCTCGCACCGGCGGAAGGAAGCGCGGAGGTGCGTGATTCCGAGGAGGATTCGCCGAGATGCAGAGGAGCCGGCGGACGATGCTCGCCTCGGTGGAAGGAAGCGAGAAATCGCGTGCGATTCTGAGGAGGTTTCGCTGGGATGCGTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0203400.1 | 3 | 7140081 | C | A |
| Osa03LNT0203400.1 | 3 | 7140817 | A | G |
| Osa03LNT0203400.1 | 3 | 7141100 | T | A |
| Osa03LNT0203400.1 | 3 | 7142176 | T | C |
| Osa03LNT0203400.1 | 3 | 7142210 | A | T |
| Osa03LNT0203400.1 | 3 | 7142288 | G | A |
| Osa03LNT0203400.1 | 3 | 7142292 | A | T |
| Osa03LNT0203400.1 | 3 | 7142712 | A | G |
| Osa03LNT0203400.1 | 3 | 7142790 | T | C |
| Osa03LNT0203400.1 | 3 | 7144765 | C | T |
| Osa03LNT0203400.1 | 3 | 7145267 | T | C |
| Osa03LNT0203400.1 | 3 | 7145625 | C | T |
| Osa03LNT0203400.1 | 3 | 7145675 | T | C |
| Osa03LNT0203400.1 | 3 | 7145703 | T | C |
| Osa03LNT0203400.1 | 3 | 7145730 | C | G |
| Osa03LNT0203400.1 | 3 | 7145852 | T | C |
| Osa03LNT0203400.1 | 3 | 7145866 | C | T |
| Osa03LNT0203400.1 | 3 | 7146449 | A | G |
| Osa03LNT0203400.1 | 3 | 7146516 | C | T |
| Osa03LNT0203400.1 | 3 | 7146759 | A | G |
| Osa03LNT0203400.1 | 3 | 7146835 | A | G |
| Osa03LNT0203400.1 | 3 | 7140199 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0203400.1 | osa-miR5833 | Cleavage | 5.0 | 22.606 | 1 | 21 |
| Osa03LNT0203400.1 | osa-miR171c-5p | Cleavage | 5.0 | 16.343 | 1 | 21 |
| Osa03LNT0203400.1 | osa-miR816 | Cleavage | 4.5 | 14.177 | 1 | 20 |
| Osa03LNT0203400.1 | osa-miR1854-3p | Translation | 5.0 | 10.552 | 1 | 22 |
| Osa03LNT0203400.1 | osa-miR2118h | Cleavage | 4.5 | 19.811 | 1 | 22 |
| Osa03LNT0203400.1 | osa-miR2118k | Cleavage | 4.5 | 19.811 | 1 | 22 |
| Osa03LNT0203400.1 | osa-miR2866 | Translation | 4.5 | 23.121 | 1 | 20 |
| Osa03LNT0203400.1 | osa-miR2918 | Cleavage | 4.5 | 19.73 | 1 | 21 |
| Osa03LNT0203400.1 | osa-miR1862f | Cleavage | 5.0 | 14.235 | 1 | 20 |
| Osa03LNT0203400.1 | osa-miR1862g | Cleavage | 5.0 | 14.235 | 1 | 20 |
| Osa03LNT0203400.1 | osa-miR5506 | Translation | 5.0 | 11.02 | 1 | 21 |
| Osa03LNT0203400.1 | osa-miR5519 | Cleavage | 4.5 | 20.357 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0203400.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0203400.1 | 3 | Rhz2 | Others | Others | OSR13 | OSR16 |
| Osa03LNT0203400.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0203400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0203400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0203400.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)