© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0203500.1
GCAGCAAGATTTTCTTACTTTTATATATGAAAACGGGTGCATGCTTTTGCAACACAATTGTCCTTTTCCACCACCATTATATTGCTAATGTTAACAAGGTTCAGGAAGCCTTCTTACATTTGTACCTCATGGCACAGAACACAAAGGCCAGCATATTCAAGAAACACAAGCCAGCCATCATCCAGAAGAACCGATCCAAATGCCCTTCGTTCAAGTTATCAGGTATCCATCCAGGACTGCCTTCTCTGGCTGTGAACACTGGCACAAGAGAAACGATAAACGAGCTGAGGTAACTTCCTGCCGAAACGTTAGCAAGTGAGAATGCGAGACATAAGCTTCTCATGGCGTCCGGTGATTCCTGGTAGAAAAATTCAGTTAACCCAATGTTTGAGAACACCTCTCCCACGCCTATCAGGAAGTACTGGGGTCCCTGCCACAGGATGCTCATTGGAACAGCCACCTTCCTGTGCACCAAACCTTCATCCTGCGCAATCCGCAACCGATTACTCTCCACCAATGCTGCTGATACCATGGAGAGCATGGAAAAGAACAGGCCGATCCCCATTCGCTGCAGTGGAGTAATGCCATTTGCTCTGCCAGTGAATTTTCTGAACACTGGAACAAGGACTCTTTCATAGACTGGAACTAGTATAAGGACAGCAATGACATCAATGGATTGGAAGGACGCCGCAGGTATTTCGAAAGAGCCGATGTGTTTCTCCATCACCATCCCCTGTTCTATGAATGTCGAAAACATGTTGTCCAGAACTGCAGCAAATAATATCATCGTTGCCCAAACGGGGAACATCCTGATCAAAATCTTCAGTTCCTCCACTTGAGTGACTGTGCAAATCTTCCATGTGTTTAGTAGGCCATCAGATTCAAAATCAGATGGTGTCACCATTGCAGCTCTATCAAAGAACTTAAGTCCAGTTGTATGCTCCAATTTTCGGCTGCCTTCGATTGCTGAACTCTGCCCCAGAAACTCATAAAGAACTGAGGAATCACATGGCAAATCTTTATCGCGTTTGTGAATAGCAGCAACAACAACCTGGCATATTCTCGCAAGAGGGCTTCCTCCAGGTTTCTGAAATCTATACATAGAGGAGCCAAAGATAAAAGTACCAAAACCTAAATACACAAATAGTGCAGAAATGGTAAAACCCCAGATCCAACCTTTGTGATCTTGCACCCACACAATAACAGTCCCCGAGATCAATGAGCCCGCATTGGCTACGAAATAGGTCCAATTGAAAAAAGAACTCTTTTTTGTTCTCTCATTTTCATCAGTGTCATCAAATTGATCAGCACCAAATGATGATATGCAGGGGCACTGTGCACCATACCCTAAAGCAACCATGTACAAACCGACAAAGAATATGATGTTCTGAGAAGAGACTGGATCTGTCCATATGATCCATGAGTGAGGACCAGTAGAGATTAATGGAACTGCTGCTGACAGAAGCAACATCATCAATCCGATAATGAAGATCGTGCAGAAGATCAGAATTGTACAGTACTTCCCCAGATATGAATCAGCTAAGAAGGCTCCAACCAGAGGTGCAAGATAACTTGTTCCTGACCAAGTTGCAACATCTCTTGCAGCGGCCACGTTTGTTTCATGTAGAACTTTTGTGAGATAACTGACTAGGTTTTTTACAATTGAAGTAAAGGCCAGATAAGAGCAGAATGAAAAAACGATGGCTAATGAGGAACCCTTCCAGTTCCCTGTATGTTTCCTTAAAGCAGGATGCCCACGGATGCAAACAGATCCATCACCTGTATATTCAAGGGTCACTTGCGAGGAGTTCTCTTCATCCAGCAGAGGCTTGTCATGCTGGTATGAGGAGTCCATGGCTTTACTTTCTTACAAGTAAACCAGGTTAATGTCCGAGAGAATGAAGCATGAACCGGCCGGATTGGCCGGACTCCGGCGAGCCCGACACTGAGCCCGCCACTCTCTGCTGCTCCGCGTGGGCCGTCCTCACTCTCCTCCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0203500.1 | 3 | 7165010 | T | C |
| Osa03LNT0203500.1 | 3 | 7164139 | A | G |
| Osa03LNT0203500.1 | 3 | 7164715 | T | A |
| Osa03LNT0203500.1 | 3 | 7164876 | G | A |
| Osa03LNT0203500.1 | 3 | 7164891 | T | A |
| Osa03LNT0203500.1 | 3 | 7165678 | G | C |
| Osa03LNT0203500.1 | 3 | 7165870 | T | C |
| Osa03LNT0203500.1 | 3 | 7166097 | A | C |
| Osa03LNT0203500.1 | 3 | 7166592 | T | C |
| Osa03LNT0203500.1 | 3 | 7167370 | C | T |
| Osa03LNT0203500.1 | 3 | 7167967 | G | A |
| Osa03LNT0203500.1 | 3 | 7168778 | T | C |
| Osa03LNT0203500.1 | 3 | 7165011 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0203500.1 | osa-miR5827 | Translation | 4.5 | 12.931 | 1 | 21 |
| Osa03LNT0203500.1 | osa-miR5079b | Translation | 2.5 | 10.419 | 1 | 22 |
| Osa03LNT0203500.1 | osa-miR1849 | Translation | 4.5 | 8.685 | 1 | 21 |
| Osa03LNT0203500.1 | osa-miR2878-5p | Cleavage | 5.0 | 14.59 | 1 | 24 |
| Osa03LNT0203500.1 | osa-miR5079a | Translation | 2.5 | 10.419 | 1 | 22 |
| Osa03LNT0203500.1 | osa-miR5150-5p | Translation | 3.0 | 14.828 | 1 | 24 |
| Osa03LNT0203500.1 | osa-miR5339 | Translation | 5.0 | 14.901 | 1 | 21 |
| Osa03LNT0203500.1 | osa-miR5487 | Translation | 5.0 | 10.499 | 1 | 21 |
| Osa03LNT0203500.1 | osa-miR5506 | Cleavage | 4.0 | 11.01 | 1 | 21 |
| Osa03LNT0203500.1 | osa-miR1850.2 | Cleavage | 4.5 | 21.463 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0203500.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0203500.1 | 3 | Rhz2 | Others | Others | OSR13 | OSR16 |
| Osa03LNT0203500.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0203500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0203500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0203500.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)