© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0017800.1
ACCATGAAAAAAATATATATGTATATATAGGCATTACACAAAAAGTATTGTAGTATATATCTTGAGTAGAGAACTATTACAAACTACTTTAATGAAAATCAGTGTTGAGGAAATCCTTGGCTAACAGAATGTTAAGATGAAGTATATAGGCAATCGCTAATGAACTTGCAAGAGCAGGGTTGGCGATCCAGTATATTCGACTTTTCAGTCCCTTAACATTAATTTGCTATATCCATTTTGAGATTTTTATGGAGGACTTGACGATAATTTTAATGGAAAGAACATCATGCATGATAAGAATGAGAATGGGTTTAATTTCAATCTTGTTGGCATCTGGCAAAACTCAACCTCAAACCAAGAACAATCCTTCATGATGGGCGTCTAGATATTTCCGCTTGAGGCTGGGCAGCTGTTGCCGCAGGCATGTAGGGAGCACTTTTAGAGCAGGGCATTCATTAATGATAAGCTGTTGGAGGGATGAGTATGCTTGCGGTGAATCTTGTAGCGATGCCAGGCTTTTGCAGTGGTGGAGATTGAGTTGTACCAACGAAGGGAGCTCGCCCGAGTGAGACTCCAGTGATTCAGGAGGAGAGAAGCGGTCCCCAGCTGGTGATGATGGTTCCAACGCAACAGCAGACACAATGTTGTCGCTGCAAGGCCCTGCTGGCCCGTGTCTCTGCTGGCCGAATATCGACTCAAGCTTAGGGTTGTCGTCTATGTCCATTTCCTTGAGAGATGGTGGGGCGTTGAAGATCTCTACCAAACTTTCACATTCATGTATTGATAGTGACTCCAGACGTGGCAGGAGTATCTCCCTTCCTGATGTTGACTGCTCAAGAGCTTGTGGCGAGAATCCCTTCAGTTTGCTGCATCGCTGTATCACTAATGTCCTCAAGGCTACCAAGCTCTGAAATTCTCTCTCTGGCCAGTGGATGAGACCATCACAACTAATAATTACCAAATCTTTAAGCTGTGCAAAGCATGCCCATAGTGCTTGTGCACCTGAACGGAAGAACACGTTGAAGCCAACTAGCTTCATAACTGGCAAAGGGTACTCACGATTCTGATTGTCCTTGCCATCCACCCACTCAATCAAAAAGCGTTCAGTTAGAGGTGTTGTTTCTTCACCTTCATGCTGCAATCTCAGAGTGGACAATGAAGCCATGTATCTAGGTATGCAAAGGAGCATCTGTTCAGAGCCATTTCCTATGTCTAACACACTGAGCTTTGGTGCTTCTGGTAGACTTGTCAACTCTGGACATTTCACAATACTAATGTTCTCAAGGTTAGGGAAGGTCGGTGGTTTGTCTTGTGTTCCTTCCGCTGCCTGCCATCTCTCGAATTGATTTAAATCACAGAGTTCGAGTTCCTTTAAAGCTGGTAATGCAGGCTCTGACATATTACTGTCACTAGTAGGCAGTGATGTTAGCTCTCCACATCCCTTAATAACCAGCTTCTCAAGCTGAGGAAAATCAAGCTTTTCTTGTCTCTCATTTATTTCCCACCATCGGTTGAAACTCTTCAAGTTTGTTAGTTTAAGCTCTTTTAGTTTTGGGAATGTTGACGGTATCTCACTGTTTTGACCAATGCTGCACAAATACTGCAGTCCATGGAATCCATCCAGCCGAAGAACTTGAAGATCTTGTAGCTGCCAAAACTGAAGGAATATTTTGGCACATTGTACAATTATCTAGATCAATCTCTACAAGGCGTTTAAGCATACCCATCCATGATGGGAAAGATGAGCTCTTGCAGGATTTGACATTCAGAACGCGAAGCTCATCATGAGGTTTGAGAGCTTCGATCACCTTCTCATGACAATCTGATGCATTGGTGTAAGATCGATCTTCTTTGTCATTTTCATTCCATACTAAAGAAAGTGTTGAGAGCTTCTTGTTTTCAAGTTTCATCAGTCTTGCATCTTCCTCGTTAACATTTTCCATCTGACGTAGCTCTAGTTGACCGCTGATATCTAAATGTTGTAGCTCTCCGACATTACTGCAACCAGAGCCAGTACCAGCTACAAAACAAGTGAGTGTTTGTAAGGAAGTGAGTTTTCCCAAATCTGGAGGCATGTGCTTCAAACTTGTACATCCATGAGTGTGGAGGTGACAGAGGGCTGTCATGTACTTCATTTGTTTTGGAAGTCGATAGAGATCACTGCAGTCAGAAAGGTTCAAAGTTCGTAGACAGTATAGGATACTTATATCGTCAGGAAGTACTCTGATATCACTTTCTGAGAGATCTAGGTACCTCAAGTGATGTAGATGCTTTGGCTGAAGTAAGAACAAACTCCTACACTGATCGAGTTTCAATGCTCGTACAGCTCTGTATTTTGCTGAGTGTTGCAATGAACTTGATGTGAAAATAGGTTCAGCACAGAGCAGTGTTTGGATAGCTGGAGATTCTTTTTTCAGATAATCATTCATCACATTATCTGGATCATCACATGATAAAAGTAGATGGCGAGTAGCATTTGAATATGACCCTCTTTCAGTAGGATATTTAGTTATAGCGATACATTCCTTTCCCATAATTGAAGTGGCAACATCATGCATAAGATCGTGCATCTTACATATGATTCTGGAACAATGCCCATGGTTGCTTCTATATTTGTCAAATCGGACTCGCTTCAACTCCTGAAAGAAAGATCTAGAAGCTAATTCATTGAAAATACCTTCTCCAGTGGTTTCAAGGCGGATATCTTTTATTTCTGGGATTAATCCATTTGCGATCCTTATCAATCTCGTAATCCTTAGGAAAAATAGCACAGAAAGCAAAGCACTGCTTCATATGTGACGGCAAATTGTCATAGCTGAGCTTCAGTATTGGTAAAATTCCAGTCTCCTTAGTGCAGATACTGCTGCTTCTTAATACTGCCTCCCATTCTTCCAGGCTGGTCTTGGTATAAAGTACAGAACCTAGTGCTTTTGCTGCCAATGGCAACCCAGCACATCTCTCCACAAACTGATCAATCATTTCCTTCTTTTTAGATAATAATGACTTATCATCCATTTGAACTAGCTCAGCGGGCTTGATCTCCTTTTTCGGTCTAAAAGCTGCTGTGTCAATGATTTCCTTAATGACACTGTTATTTAGAGCAGTAAGATTATATGCATCAGTTGTGTGCATTAGTTCAGCAACTCCTCCTTCACGAGTTGTTGCTAACACTGCACTACCAGTGCTACCATGTTCGAGGCATTTCTTCAGTTTACGCCATTTTTCATCATCCCTATTCCAAACATCGTCCAATACAAGGAGATACCTCTGCCCGCTCACTAATTTCTGAAGCTCGTCAAGTGCCGAGGTTTGATTTTCATTGATGGTTACTTTATCACCTTTTTTAGGAACTGCATCAACTATACTTCTAGCAACAGACGCAACATCAAAGTTGTCAGACACACATACCCAGATCATCAACTGGAAATGGTTCTGAATTTCAGGCTCATTGTAAATGAGTTTGGCTAAGGTAGTTTTGCCTAGCCCTCCCATTCCAACAATAGGAAGGACGGCGAGTTTTACATTGCTTGCTTGGGAGAGCAATATGCTAACGAGCAGCTTCTTATCTTCATCTCTCGATCTGCTAGCAATGTTCATTGGGTCAAAGATGTCAGAATCGGTTAGCCTCCATTCCTTGGACTCTATAGACTGAGGTTCGAATTTAAACCCAAAGGCATTCATCTCTGCGACTAGCACTTCAATATTCTGCACGATCCGGCAGAGCTTCCTGCCCATCTTGTATCGGAACACGACACGGTTGTGAGTAGGAAAGAGTTTTACCGCATCGATGCCGAGCTTGGTGTAGTGCCCGTTCTTCTTGGCTTCACGCCGTAGCGCCTCGTACTTGAACTCGTCGAAGACTTCATTCGCCTCATAGGCCACTGCCTTGAGCTCCTCAAGCCAGGCCTTAGCTCCTTCCCTGTGTTCAGATGCCTGCTTCTCAGCGTCAGAGATGACGTCCAAGATGGCCGGCAGCTTGCGCTTGAGGATCTTGTGCTGCACTTCCATGCCTTCCATCACCTTGTACTGCTCCAGGAGGTAGCTGGAAGCCTTCTCCTTCACCATGTGGACCAGTGGCCCGATCACCATGCTGGTCACCAGTTCACCCATTGTAGAGCTTACACACAAATATCAATGAAATGGAGAGGGAACTGGTGGTTCAATGGGGTCTGTCCACAATTTATCTTGGACAGCGTCCCAATCAATCAGTACAAGATGGACCTCCACTGGTAGAAGAAAAGGTGCGCGTAATGTGCTGTCATTGTCCATCGCTGTGTGCAGCAAGTTGCAATTTGTCATGATCCTGAATATAATTATTAGCCACTTACTTTGAAAGGGAATGAACACCCGTTGTAAATTACGCTACATTCCCAACCTGACAAGCAATTGATGTCCAGAAGCTGCTAAACAAAGTAGGGACTGGTGCTTAGCCTTTATGAAAAATCTAGGTCATTAAATTATGAAAAAGACAGTAGGCCATCTCTACCCTTTTTCTCTGTTTTTCATCGATGGTAAGATTGTAGGAAGTTACAACGGTGCGATGCTGCTAACTGATTGCATGAGTTCCGCTCTCACAATTCAGTGTACCTATACTCCTTGAAAAAGAAGTTGAATTTTGTGGCTACGTAACACACTGATGAGATGGTTAGTAATAGCCTAAATGCAGATCTCAGCAGTAAAAAAAAAAAGAATTCAAACGTATACGCGCAGCAAAATAAGGGTGAAATCATCAAAAGCAATCAATTATGGCCATCCTGAAGATTTTAGTTTGGCAGTGCTTCAGAAGTCCTAACAGGAAGGAGGCCATGTGGATAGATGATATGTGTAAACAAAAATAATTCCAACATACATAAAAATGAAAGGGAGAAACTGCAGCACAATATACATACTAGTTTTTGGTCGTTTTTCCTGACCATTAAATAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0017800.1 | 1 | 14576849 | G | A |
| Osa01LNT0017800.1 | 1 | 14577043 | T | C |
| Osa01LNT0017800.1 | 1 | 14577200 | C | T |
| Osa01LNT0017800.1 | 1 | 14577258 | C | T |
| Osa01LNT0017800.1 | 1 | 14577456 | A | C |
| Osa01LNT0017800.1 | 1 | 14577591 | T | A |
| Osa01LNT0017800.1 | 1 | 14577690 | A | G |
| Osa01LNT0017800.1 | 1 | 14577788 | A | T |
| Osa01LNT0017800.1 | 1 | 14577818 | A | G |
| Osa01LNT0017800.1 | 1 | 14577929 | A | T |
| Osa01LNT0017800.1 | 1 | 14577956 | T | C |
| Osa01LNT0017800.1 | 1 | 14577981 | T | A |
| Osa01LNT0017800.1 | 1 | 14578058 | T | C |
| Osa01LNT0017800.1 | 1 | 14578201 | C | G |
| Osa01LNT0017800.1 | 1 | 14578798 | C | T |
| Osa01LNT0017800.1 | 1 | 14578945 | G | T |
| Osa01LNT0017800.1 | 1 | 14579097 | G | T |
| Osa01LNT0017800.1 | 1 | 14579415 | T | C |
| Osa01LNT0017800.1 | 1 | 14579417 | T | G |
| Osa01LNT0017800.1 | 1 | 14579704 | C | T |
| Osa01LNT0017800.1 | 1 | 14579995 | G | A |
| Osa01LNT0017800.1 | 1 | 14580058 | C | G |
| Osa01LNT0017800.1 | 1 | 14580120 | C | T |
| Osa01LNT0017800.1 | 1 | 14580660 | T | G |
| Osa01LNT0017800.1 | 1 | 14580768 | T | C |
| Osa01LNT0017800.1 | 1 | 14580945 | A | G |
| Osa01LNT0017800.1 | 1 | 14581198 | A | G |
| Osa01LNT0017800.1 | 1 | 14581202 | T | A |
| Osa01LNT0017800.1 | 1 | 14581350 | G | A |
| Osa01LNT0017800.1 | 1 | 14581388 | A | C |
| Osa01LNT0017800.1 | 1 | 14581725 | T | A |
| Osa01LNT0017800.1 | 1 | 14577916 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0017800.1 | osa-miR5536 | Translation | 3.5 | 20.987 | 1 | 22 |
| Osa01LNT0017800.1 | osa-miR5536 | Translation | 5.0 | 17.94 | 1 | 22 |
| Osa01LNT0017800.1 | osa-miR5820 | Cleavage | 4.5 | 15.357 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR5823 | Cleavage | 4.0 | 18.072 | 1 | 24 |
| Osa01LNT0017800.1 | osa-miR1440b | Cleavage | 5.0 | 20.918 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR1440b | Translation | 5.0 | 14.957 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR7693-3p | Translation | 4.5 | 13.792 | 1 | 22 |
| Osa01LNT0017800.1 | osa-miR171f-5p | Cleavage | 5.0 | 22.165 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR166g-5p | Cleavage | 5.0 | 18.322 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR437 | Translation | 5.0 | 14.049 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR395v | Translation | 5.0 | 20.751 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR395v | Translation | 5.0 | 15.7 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR1854-5p | Cleavage | 4.5 | 18.541 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR1879 | Translation | 2.5 | 5.253 | 1 | 24 |
| Osa01LNT0017800.1 | osa-miR1879 | Cleavage | 4.5 | 15.145 | 1 | 24 |
| Osa01LNT0017800.1 | osa-miR2870 | Cleavage | 3.5 | 13.473 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR2905 | Translation | 4.5 | 23.794 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR2875 | Cleavage | 5.0 | 20.573 | 1 | 24 |
| Osa01LNT0017800.1 | osa-miR2923 | Cleavage | 4.5 | 16.605 | 1 | 22 |
| Osa01LNT0017800.1 | osa-miR395x | Cleavage | 4.0 | 16.405 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR395x | Translation | 5.0 | 20.008 | 1 | 21 |
| Osa01LNT0017800.1 | osa-miR5157a-3p | Cleavage | 5.0 | 20.734 | 1 | 24 |
| Osa01LNT0017800.1 | osa-miR5157b-3p | Cleavage | 5.0 | 20.734 | 1 | 24 |
| Osa01LNT0017800.1 | osa-miR5498 | Translation | 4.5 | 10.378 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0017800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0017800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0017800.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0017800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0017800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0017800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0017800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)