© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0204100.1
GGTGGTTTCAAACCTTCGACAGCAAAAACGAAGGCACGTCATTTTCTTGAGTGAAATCGTATATATACATCATATCCCATTACAAATACTACGAAGAGCATCATAAACACGCTCTGCTGTTTCTTCATCATCACAGTAAATAGTAGTCCTTTCAGATGTCACCTTCACCAGGGCTTCTCCTGGACTAGTGATCGAAATTACACGTTCACGATCTGAAGGTGCAGAGTAATCAGCGTCTGCAGAAAACGAGCATACAATTCCCTTTTCCTGCAAGGCTGACGGTATACAGCTCGCGTCCACAGTTCCCCAGTGTAGCAAGTGCCGCTCTGATCGATCTAATTCACTCTTTGCAGCAGCTAGCACATATTGTCCATTGCTTAGAAGGAGCTTTGCTTTCAACCTCGCAACAGCTGTGGTCTTGTCCAGCTGCCTAGGTTGCAACCCAAAGGCAACCTCAGTTGTCATGCGCACCTCGAATTCTTCCCGCATATTTGGGACCTCGATTGTTTTCCCCTTTGAGTAATACAGGAATGACCATGGTTGCTTATCTGTGGCTGGACACAACGACTTCTGACCTTCAGGAAACAGTATGAGCTTTGGTTTCAGCAATCCCAGTAATGGATCAATTTTCCCCACCTTTATTCCAGAAAGGAAAGAACACCCAAGGACCTGGATCGCCAGAGGCATGAAAGGTTTTAGAGTCAACTCAGCATCAACTCCTTGCTCCAAAACAAGAAGACATCGTTTGTCTGCACGCCATCGATGAAGCAAATGGACAGCTGGGCCATGCCTAAGACTCCAATGTGGACAAAATACAATGCAAGGTTCCTTCCAAGAGCAGGCCCTTTGAGTATAAATGAGAGAACAGTGATAGTTTGCCTTCCTTCAAAAGCTCTACATGGCCGAATAACGGCTCACAAGAGAAAAGCTTCTCTTGGCGTGACTTGCATAGCCATTCAGGCAAGGCATTGGTAAAAGTAATTATTTCTTCTGCTGTCTCAGAAATCATAAATATGGGAACCTGACTACGTAGTTAGCAGTAAATCAGGCACTCTCAACTTGACACATCCACATAAGCAAATCCAAATGGCATATCCTTCATGTTGGAAGAATGTAGTGTTTCTGACATATGTTCCAAAAGCAAAAGAATAATACCAATTCGTCCTATTGGTATTAATACAGAACCACCAGAATTTATTGCATCAATGATGCATGAGCATATGAAGCTGATTCTCTCTATCTCCTCTGCAATATCATCATTGCTGCACAGGAATTTGATGGTTTCATCTTCATCCATGCCATCATCCCTGAACACTGAATTACTAGCAAGGAGAATGTCAGTTTCATCCACTATATGCTCACCCATCTTCTTGTTATCATCATACATGCCATTTAAGGAAGAAAAATCCGAAAACAATATCACATCATTTCCCTTCAGAGAGCTATAATCAAAGTCTAATGCATGAGCTGACACAAATATGGAGCTCGGCAAGTAGGTCATACTTGCTCTTGGACCTTTTATTGTCCAAACACAATTGCCAAGTTCGAGACCAGAACTAGAGGCTTTCAGCATCAACATGCCATTGAAGCAAACCTCCTCTCCATATTTTACATACTGGGTTTTTTGCATGCATTCTTCTATATTATCCAGACTGTAAAGTGACACCAAAGCAGCTAAATTATTATTTTCCTCGTCTTCAGTCGTGATCTTCTGCAACACTGACATGAGTTTCTTGAGCTTCTCCCCTTCCATCCACACTGGTGACTGATCCCTATCTGGTCCATAACACCTTACAAACTCACGGTGCATCTCTACCAACTCTCTCATCATTAGACTTCCCATCCTAGCAGCTACCTCTGTCACATAGACCTTGGTGTTCGCAAATCCGGGGAATCGCGTGAGGAACGGGAGGCCAAGCAGCCCCGTAGCGGATGACACAAGCACGGCGTCTATGTGGCCTGCTTTGGCGGCCGCAACCGCGGTAGGCGACCGGTAGTAGGGCACACCGCGGATTAGGTCCTCCGCATCACCGGAGGAGGACGATGCGCCGAGGGGCACCGCGGAGAACGCCGTGAGAGCGGAGAGGTCGATGGGGCAGTCAAGGAGAATACGGAGCCCCTCCACCTCCAGGAGATGACTCGCCGGCGTGTAGTAGCCTCCATCGACTCCGGTGTCCAGGCAGGTCAGTTTCATCGAGAACTCGAGGAGACACGGGGGATGAGGTTGGGAGGTGGGGAGGGGGTGGCGGCGGCTCGGAGAGAGTGGCGGCGCCGCCCTGGGAGCGAGAGTGCGAGAGGGGAGGACACAGCGGTTCGTGGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0204100.1 | 3 | 7573366 | A | G |
| Osa03LNT0204100.1 | 3 | 7574185 | G | A |
| Osa03LNT0204100.1 | 3 | 7574285 | A | C |
| Osa03LNT0204100.1 | 3 | 7574287 | T | C |
| Osa03LNT0204100.1 | 3 | 7574427 | C | A |
| Osa03LNT0204100.1 | 3 | 7575051 | G | T |
| Osa03LNT0204100.1 | 3 | 7576372 | T | G |
| Osa03LNT0204100.1 | 3 | 7576744 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0204100.1 | osa-miR5532 | Cleavage | 4.5 | 19.531 | 1 | 22 |
| Osa03LNT0204100.1 | osa-miR160a-3p | Cleavage | 4.0 | 10.49 | 1 | 21 |
| Osa03LNT0204100.1 | osa-miR160b-3p | Cleavage | 4.0 | 10.49 | 1 | 21 |
| Osa03LNT0204100.1 | osa-miR160c-3p | Cleavage | 5.0 | 10.49 | 1 | 21 |
| Osa03LNT0204100.1 | osa-miR160d-3p | Cleavage | 4.5 | 10.49 | 1 | 21 |
| Osa03LNT0204100.1 | osa-miR418 | Cleavage | 4.0 | 13.336 | 1 | 21 |
| Osa03LNT0204100.1 | osa-miR528-5p | Cleavage | 5.0 | 12.986 | 1 | 21 |
| Osa03LNT0204100.1 | osa-miR1874-3p | Cleavage | 2.5 | 19.26 | 1 | 24 |
| Osa03LNT0204100.1 | osa-miR5144-5p | Translation | 4.5 | 13.045 | 1 | 21 |
| Osa03LNT0204100.1 | osa-miR5144-5p | Translation | 5.0 | 17.97 | 1 | 21 |
| Osa03LNT0204100.1 | osa-miR5340 | Cleavage | 4.0 | 15.86 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0204100.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0204100.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0204100.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0204100.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0204100.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)