© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0204400.1
AAAATTTTTTGGGATCTAAACAAGGCCTTAGGCCGAGTTTAGTTCCAAAATTTTTCTTCAAACTTTCAACTTTTCCATAATATCAAAACTTTCCAACACACACAAACTTTTAACTTTTCCATCACATTATTTCAATTTCAACCAAACTTTCAATTTTGGTGTGAACTAAACACACCCTTAGTAGATCATCGTCTGACAACATCGTGTTGACTCATTCATCAATGGCCTGGTCAGGTGACTTGCATTATGGGCTATTTTGCTTTGAACCATGGCCTGGTCAGGTGACTTGCATTATGGGCTATTTTGCTTTGAACCTAAGGATGTGTTTAGATGGTGGAAAAGTTAAGAAGTTAGGAGAAAGTTGATAGTTTGAAGAAAAAGTTGGTAGTTTATGTGTGTAGGAAAGTTTTCGATGTGATGTGATGGAAAGTTAGAAATTTAGGAGGAACTAAACACGGCCTAAGTGTACAATCACTCTGAAACATCTACTTCTGCCGAGGTGCTAGCTATAGGCTCTTTCCAAAGAGCGTTTTTTTTCCCCTTTTTGCGGGGCTCCGACTCCCTACTTAATTTCTGCCGGCCATTCGTAGGAAGTTGGTGTCCCGGACTTCTAGCAATTCCTCGTCGTCGCCAGCGCAGGCGAGGCACGAATGAGGCGGTGGCCTCTTCTTGCTGTCAATAGTACAGCCTCGTCGCTGATGGCGTCGTTGAAGGAGCGATAGTGTCATATTGATGCAGGATGTGTCTTGTGCTGTGGCCGTGCCGCAGGAAGGCCTCCATGAACAAAGGAGCAGGGATCAGGCACGGGCACGAATGCACGATGCGCCTGATCGCCCATTAGCATTCTCGCATGCAAAGGCGTTCTTGTTACCAACGTCGGAGTTTAAAACTCCGACACCCTTTGGTGATCTGCATCCGTCCGATCAGACAGTGCGATGAGGTGGAGCGTTGCTTTCTGGTGCCAACTAGGAAAAATGCCGACGTGTCGCGCAGCACCGCGTCCCTGCGTAGTCCCTCGCTCCTTAGTTGGGAGACGAGTTCCTCAACCACCTCAAGGACGCGCGGCGGAGGAAAATCGACCCACGCCTGCGCTGTGAAGGTCGTGTCTCCGAGTTGCCATGCCCTAGCGCACGCGTGGGAGATGGAATCTGCGAAATCGCCGTCCCGCCGGAGAAGTCCCAGCAGCAGGCCGTGGACCGCGACGAGGAGTAACGGCACGGGGCAGCCGACGCGACGGCGAGGCCGGTGGTGGTGGCCAACCGCCGAATCTACTCCTCCTCCTCCTCCTCCTCGCCGCTGCGTGCAGTGGGTGCGGCGCCTTCTTGCTCCCTCCTCCCCGCGGCGTGGGAGGCGAGGAGGCGCGACGGACTGGGAGGAGGAGCGGCGGCGCGGGCAGTGGTGGCCGCCGCCGCCGCAGCAGCCGGGGACGTCTCCCGCCGGCGCGCCAGCCACAGCCGCCGGGGATGCATCCCGCCGCCGTGAGGGGCTGGAGAGAGGGAGAGCGGGCTCTGCGGCCGCCGAGGATGAGCCGCCGGCCGGATCTACTCCCCCACCTCCTCCTCCCGGCCGGCGCCTTGGCCAGGTCGACGCCGAGCTCGTCGACGTTGGGGACGCCGCCGCCACCACTTCTTCTTCGAGGACGACGCCACCGCTGCAATCGAGGCCGCCGCCACCGCCACCGCTTGGAGGCCTCCGCCACCAAGGCCACCATGCCGGCGGAGGGAGAAGAAGAGCCGGCGCCAGCGGGGAGGAGTGGATTTGGGGATTTGGGGGAGGATGAGCCGGTTGAGGGAGGTGGGAATCCGTGGGCCCCACTAGCAGATATTTGTGGGTCCCACTAGTGGTGCTTGCACTGTAAAGAGAGGGTCTTCAAAGCTCTTTATCCTACGTGTCATCTCGTGGTAACTCAGGATGGGTGCTTGCAGTGGGAGAGGCCTTAGGCCCTTCACATTGCACACAGTTGGACCGGTGCTATGGGGGCCACGTTGGATTCTGGCTTGCGTGGAGCGAGGACGCGCGCCTGTGGAGAGCGCCCCGCCCCCAACCTGAGACGCGCGTTTCCTTCTCTCGCGAGGCGAGGAAACGACTGCTTTTCTACACTGTGGAGCTCGTGTCCTCGCACCGCCCATGCTTGGCAACAAATCGACACAAATCGCGGCAGCAAACACGGCAGCAAATCGGCAACAAATCAACAAATCGAGTGGCACGGGCGGCACGGTCGACGGAGAGGCGAGGCGCACAGCGGCGGCGTCCCCGGCATGCCGCCGCGGCGTGGGAGGTGAGGCGCGGCGGCGTGGGAGAGAGGAGAAGGAGGCAGCCGGGGACGCATTCTGCCGCCAAGAACCGCCGGCCACCCGCCCGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0204400.1 | 3 | 7749836 | A | T |
| Osa03LNT0204400.1 | 3 | 7749749 | T | C |
| Osa03LNT0204400.1 | 3 | 7749703 | T | C |
| Osa03LNT0204400.1 | 3 | 7750067 | A | G |
| Osa03LNT0204400.1 | 3 | 7750093 | T | C |
| Osa03LNT0204400.1 | 3 | 7750219 | C | T |
| Osa03LNT0204400.1 | 3 | 7750635 | T | A |
| Osa03LNT0204400.1 | 3 | 7751318 | T | C |
| Osa03LNT0204400.1 | 3 | 7751479 | T | C |
| Osa03LNT0204400.1 | 3 | 7751749 | G | A |
| Osa03LNT0204400.1 | 3 | 7750385 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0204400.1 | osa-miR7695-3p | Translation | 5.0 | 18.207 | 1 | 21 |
| Osa03LNT0204400.1 | osa-miR1432-3p | Cleavage | 5.0 | 22.683 | 1 | 21 |
| Osa03LNT0204400.1 | osa-miR1850.1 | Cleavage | 4.0 | 11.523 | 1 | 21 |
| Osa03LNT0204400.1 | osa-miR1850.1 | Cleavage | 5.0 | 0.667 | 1 | 21 |
| Osa03LNT0204400.1 | osa-miR1850.1 | Translation | 4.5 | 0.192 | 1 | 21 |
| Osa03LNT0204400.1 | osa-miR1850.3 | Cleavage | 2.5 | 13.403 | 1 | 22 |
| Osa03LNT0204400.1 | osa-miR2100-5p | Cleavage | 4.5 | 21.02 | 1 | 22 |
| Osa03LNT0204400.1 | osa-miR2104 | Cleavage | 4.5 | 21.574 | 1 | 22 |
| Osa03LNT0204400.1 | osa-miR2873a | Translation | 4.0 | 20.075 | 1 | 24 |
| Osa03LNT0204400.1 | osa-miR2930 | Translation | 5.0 | 23.434 | 1 | 22 |
| Osa03LNT0204400.1 | osa-miR3982-5p | Cleavage | 4.0 | 23.321 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0204400.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0204400.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0204400.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0204400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0204400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)