© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0204600.1
ACTTTGAACTTGGCCAACAGAACGGGCACAATTTTGAACTAAGCTACCGTACAGAATTCAGTCATCTTGTAACATACACTCCCCAAAGCTAAAAGAAATTAATGTAAAAAGAACTACAGTGCTCAGCTCTGCAAGAGACAACCTCCCCCAGTAACTAGAATGATAAACAGAACAAAATGGGGAATGGCAAAACATCAAGAAATGGCAATAAAGCAAATAATAACTTACATGTGGAGATATACTATATAACAGATATGGGGCTCAGCATCAGCAGGTTTGAAGAACAACCGGGCCAACCCAAGTGCTAAACATATCACTCAATGCCACCTGCACTTCGCTTGAACCATGTTCGCAACTTATCAGACCAGCAAGAAGGGGGAAGAACTGGCCAAGGTTCTTCTCGAAAGATGAGTCACCAAGGCCACTGATAGCTTGCAAGGTTGAGACAACAAGAGGTGCCCGGGCTGCAAGCTCTCTCCGCTTTGAAGAACCGACCGGAATAAGCCAATGACCAAGTGGCTGCGGAGCACCAGAAAGCTGAGATGGGTTTGCAGTGCTCAGGTACACCTCAAGGACCTCCTTACATAAGCCAACAAGGTGGCTTTCCACCTCTACACTCCTCTCATTGGGAGATCTGTCCAAGCAAATGTTCTGCAGGATAGTCAAGCACAACTGATACGACTCGTTCTCCAGGCGTAACAAAGGTGGGTCCTGCATTTGGGTCATCGAGCCCAACTCCTGCAACTTGGATCGCAGGTCATTATCACTGTTTATTTTATGAGCATGAGTAGCAACAGTGTGCAATGCCTCAAAGAGGATCACAGTGTTCTGTGATGATAACCGAGCTCTGTACATGTTATATATCTCCATCACAGCCTGAATCAATAGGAGTTGGACAGCAGCCCGGCACTTGGCATCACCAATTGCAAAATACAAGTTCCTTGATCTAGAAGCTTCTCCAGTGCCATCCTCCAATGGTCGAGACTCGTCTTCTGTCTTTTCTGAAGAGCCCCCATTTTCTATTGGTACATTCTCAAGGTAAGCTCCGGATGCAATATAAGAAAAATCAGGAAGGGTCTCAGTGGCAGCTTCTTTCAACGATAAAACCACCTCTAACCATTTTTCATCAACGAAGACAGATCCGGCACTGCTCATCAAACGAACAAATGCGGCAATACCTATACCGGCAAGGCTCTGGTGGGGACGCTTTATGAAACTTGTCAAGAGCAACAGAATTTTTCTAAGAAGAGGGTTTACTGTGTCATAGAACTTAACAAAGAGGTCCACAACTAGCTGCAGGGCCAAAGTGCATGTCTCGTACATCCATGCATCTTGATCAAGTTCTGAAGGATCACTTTCCACATTCTGTCCTTGTGGAGAACCACTTGATGGATCAATGGCATGCCGTACGTAATCAAATATTGGGAAAAGCACTGAATCAAACACCTTCTCCCACAAAGGCAAGGAGAAGAGATGACCATGGTTTCTTAATGTGTCAAATAACACCTGCAAGGCACTTTTCCTGATTTCAGGTCGTAGGTCGAAGGTAAGTTCAGATAATCCTGCTAATAAAGGAAACCAAAAGTGTATAGTATCATCCTTATCAACAAGAACTGCACTTTCCTGCTTTCCATCCTTGGTCAAGCGAGGAGAAGGAGGATTCTCCTTCAACCTTGAAGAGGATCCAATGTCACCTTCCGCTAGCTTTGCCGCACAGAATCGAAGAAAACCAATTGCATTGAGGCTTATATCCTTGTTAAACCTACTGTTAGTAAATGCAATAAGACAGTTCACACAATCAGTGAAAGTTGTCGACTCGGTCTCAGTAATGTAGGGAAAGTACTCCCGCAAAATCTTCTCGATAATTTCAAACGCCAGGAGTACAATATTTTTATGGTCATCATATGAAGCTGTTGCAAAGACCATAAACATACTCTTCCACCCTGATTTCACATGACTAACACGTGCCAAGACCATTTGAGAGACACATCTGATGATTAGTTCTCTTATCTCAACAGCTCGGCTCTTCCTCATTACAACAACAAAAGGCTTCATAAATTCATTCTGGAAATTGTAGTTAGCCAGCTCTTCTCGTTCCAGGAACTTCATTGCCAGCTGCCTCAATGAATCCATAGCAAATATTGCAATTGAGAGATTCTCTGAGCAGCCAATTGTAACAAAAAAATCAGACAAGACATGCCATATGCTTGACCAGACAAGCCTGATGCGATTCATATTGTAGTGCGCAATCTCAACAATCTTTGTCAGACTAAAAACCCGTGGATCAGAAGCAGATCGCAATTCCTCCATGGAAACTTTACAGAGAGCCTTTACAAAATCAATTATGCCCTCACTGTTGAGTTTTTGACTTCTTACAAATACACGATTCATTTCAGCCATGTCAACTTGTTCTAAGAGGCTTGTCACCACATTGTTCATTTGATCAACCCCAGAAGCTTTGCCACCCACACCAGCACTATCATAGGAACCTCGTTTAGAAGCTGGAACAGTATTTGGAGACTTCTTTTTCAAAACAGGAAGAATGGATGACTTAGCCTGTTTTGATTTATCGAGGTCCGGCTGTTGCAGTGCAAAGAAAGTAGCATCTGGAGGAGCACCTTCTCCTACGAGATGTAGATTTTCAAAACGAGAAACACAGGTCAATATATGCTCCCATGCTTCTTGCAAGTAATTTCCATCTTCATCTGCAATTAATAGAATTGCCTTAATGGCTTCAATATTTTTCTGCTTAATATCCGCAGCCGAGTGAAGTGATGTAAACTTAGCAAGTGAAGTGACAAATGCATCCCTTTGAGTCTTCATCGACATAGCTGCAGTAACATGGATTGCACTGCGAAATCCTTCAAGGCACTGGGATATGACAATCTCATCATCACTCTGGTCAAGTGGAACACTGAAGGCAGCAAGCATAGGAGCCCAGCAAACCTCGACCATGAATTTCAAAACTACTACATCTGTTGCTGGATAGAATACTGACTCGGACATACGAGCCTTTTCTTTGAATTGCTCCTGCATATGCTTAATGAGATCATCGCTTGTTTCCATACGTGAATCTCGTTTGCGTACGACAATATTAAGAATGTTATCCAATCCAAGAATTTTGTTCGAGCTTGTTGATTTTTGCTGCTGGGGAACAAATTCTTCTTCTTTCATCTTAATCTCTTTTTTCCAAATCCTTTCATATAAGGACCTCATAAATTCTTCAGGCAGGTCTTTCCCATCGTCAATACCTCGATTGTTTCTAATGAAATCTTCTGGTGACATCTTATTTTTTACCATTGGATTATGTGCATCGGTGTTGAGCATTATGACTGAATAAGCAAGGACATAAGCTGTATCTGCACTGGAAAAGGCCTTTGGGTTGCATTTGCAGTAACGCTCAGCAAATTTTTCCATAATCCGATCAATCTTTTGAGCTTCTCCAGGCAATCTGAAACCTTGAAGAAAGGCTCTAATGGCTTCATCAAACTCCATGCCTTGAAAATCAAATGAATCCACATATGAATGCATGACTTTGAGGGATAAATCTTCCCTCTCCCCTAAATAATCTCCAATCATAGTCTTGTTCAAACCAGAAGAACTTTTTAAGAAAGCAGCAATTTCCTCAGGTGATTCCCCCACCTTGTTGGCATTTATTAGGAACTCAATTCCCTTCCTGGGCTTTCGATTAAATAGAGAGATACCCTCCTGAAGTTCCATCTTGTAAGCTCGGCGCTGCTCCAAAGATGCAGCCTCTGAAACCCCATTTGACATTTCTGAATGAGAATCAGATGCTTCACTACATTCGTCTCCATTATCCTCTGTGTGGGAAATCTCGTGTCCTCCATCATTATCATTTTGCTCCGACTCTACTTTAGGAGAGTCAGGATCTGGAATGCGTAGCTGCTTATTCATCCAATCTCCCATGGATCTCAGAATAGCAACCAAGCATTTCATGGCTTCACTTTTCATTGTGGTGTCCTGAGGCGGAACCAATGTGGTAGACACGCCTGCTGGAGGCCCTTGTGCTGTTTTTAGTAGACCATTAACCATCCTCTCAAATATGTTTGATGAGTGTACATCACAATCATAATTGAGAAAAATGTCTACCAAGATTTGAGAATCAGCACAGAGTTTTTCCAGGAAACGAAGAACAATCAACTTTGCTTGATAATTTGGTTGAGCAATATTTTCCAAAACTCTCAGAATAATCATGGGAAAGAATACTCCAATTTCTGCCTTCAATCCTGGTCTGAATCTTGAAACCAAGCTAATAAAAATTGAACAAGATAGCTGAAAGACTATCATATGTGCCGAGGCACAGTTCTTCAAAAGCGAGAGGCATAGATACTGCTTGATAGCCCCTAGAAATCTCTCGCTGGTCCGGAAAACAGCCCCAGCATTTTCAAGCAATATCTTGAGAAGTTCAAGAGCAAGGATCTTCCCACGCATCACAATGGGATCAGCTGGAGCATCCTTGGGTGGTGTCTTCATGGAGAGCTTGCACAATGCCCGGAAAACCAAGAAAGCGTCTCTTCGCAGTTTATTCCCAATCCTCACATCAGCATCATCATCCAAAGCGCCCACCACTGCCCCCTCCACACCAATCTCATCCTTACGACCCTCAAGAGCAGATTTGTACATGTTGATCTCCCAGTACTTGGCGTCTAGCATGTCCTTGTCTGTTGAATCAAGCAAATCTGCTGGATGTGCCCCTTCCTCTGCTGCTCTTGTCTCAAATGCACCATCATGAGCCGCTGCTCCACCTGCGCCTGCAGCTGCTGAAGAAGTTGTCCGTGCCAGAGGTGTGATTGCACCATCAATGTCTCCAATGATCTTCGAGATGAATCCCTGTACAAAGTTGGCATCAGCGGCAGGCGAAGCACCAGAAGCAGCTTCAGGCAGCTCGATCACATCAGCCACAACGATGGGTTGCACGGGCACTGTGGAGGAGTCTGCCTCCATGCGGCGGAAAACGATCACCAACATTTGCACGAGTGACGCCTTGGCAGTGGCCTGGTTCACCACGCTGCGGCTTCCCAGGTACATATCATAGCAAGCGCGCACGGCGCGAAGCAGGCAATCTCCATGGAGGCGCACCGACGTGGAGGTGACCGCCGAGAGGAGCGTCTTGAGTAGGAGGAGCTCGATGTGCTCGTCGTCGAGGTGAAGCGCGTTGCAGGCGGCATCGAGGAGGGACGCGACGAGCTGGGCCGAGGGGTCGGCGGACGGGTCGGCCTCGCCATGGATGTAGGAGTGCGCGATCAGCCTGTGGAGCAGCTCGAGCCCGGCCTCGGCGAGCTTGGCGCTGCCGGAGCCGAGCGCGGAGTTGATCGGGCCGAGCAGCAGCTCCGAGTCCGCGAGCGAGAGGCTGCGGAGCGGGCCCGGCTGCGAGGACGACGAGGTGGGCGTCGTGGGGGAGGTGGGCGTGGACGGTGCCTGCGCCGCAGCCGCCGGCGGCGGCGGGTTCTGGAGGCGGTCGAGGATGGACTTGGCAGTGTGGGAGAGCTTGGAGTGCGCCTTGTTGCGCCACGAGGCGTTTTTGATGAGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0204600.1 | 3 | 7755731 | C | A |
| Osa03LNT0204600.1 | 3 | 7756416 | A | C |
| Osa03LNT0204600.1 | 3 | 7760060 | A | C |
| Osa03LNT0204600.1 | 3 | 7761319 | A | G |
| Osa03LNT0204600.1 | 3 | 7761425 | T | A |
| Osa03LNT0204600.1 | 3 | 7761552 | C | T |
| Osa03LNT0204600.1 | 3 | 7762603 | A | T |
| Osa03LNT0204600.1 | 3 | 7763215 | A | G |
| Osa03LNT0204600.1 | 3 | 7760269 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0204600.1 | osa-miR5542 | Translation | 4.0 | 14.694 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR5789 | Translation | 4.0 | 10.322 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR5821 | Cleavage | 4.0 | 7.136 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR5821 | Translation | 4.5 | 14.635 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR5179 | Cleavage | 5.0 | 17.968 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR160e-3p | Cleavage | 4.5 | 15.401 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR171f-5p | Cleavage | 5.0 | 15.833 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR419 | Cleavage | 3.5 | 17.143 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR1424 | Translation | 4.0 | 17.778 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR169r-3p | Cleavage | 5.0 | 11.598 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR444b.1 | Cleavage | 3.0 | 23.54 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR444c.1 | Cleavage | 3.0 | 23.54 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR810b.1 | Cleavage | 5.0 | 13.33 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR1854-5p | Cleavage | 5.0 | 13.178 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR1854-5p | Cleavage | 5.0 | 16.977 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR1859 | Cleavage | 4.5 | 22.871 | 1 | 22 |
| Osa03LNT0204600.1 | osa-miR2098-3p | Cleavage | 5.0 | 16.48 | 1 | 20 |
| Osa03LNT0204600.1 | osa-miR2100-5p | Translation | 5.0 | 22.484 | 1 | 22 |
| Osa03LNT0204600.1 | osa-miR1863b.2 | Translation | 4.0 | 12.462 | 1 | 23 |
| Osa03LNT0204600.1 | osa-miR1862f | Cleavage | 4.5 | 13.397 | 1 | 20 |
| Osa03LNT0204600.1 | osa-miR1862f | Translation | 5.0 | 15.505 | 1 | 20 |
| Osa03LNT0204600.1 | osa-miR1862g | Cleavage | 4.5 | 13.397 | 1 | 20 |
| Osa03LNT0204600.1 | osa-miR1862g | Translation | 5.0 | 15.505 | 1 | 20 |
| Osa03LNT0204600.1 | osa-miR5488 | Translation | 5.0 | 19.716 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR5490 | Cleavage | 5.0 | 12.408 | 1 | 21 |
| Osa03LNT0204600.1 | osa-miR5494 | Cleavage | 5.0 | 17.599 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0204600.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0204600.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0204600.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0204600.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0204600.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)