© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0204700.1
TTAGCCGGTCCCATTTTTATTTTTGCTTTTTGATTGCGAGTTTCAAATAATGCATAGTTTTGCAACATATTTATTCGTAAGTAATACATTCACTTTACCTTCTATTTTACAAGCATTGAGTTTATTATGTTCAACTGAACTAGATATTGGGAGCTAGCCCTCTACAAGGGTCCAGCCAATTTACTTACCCAGTACCCACAGAACTCTTCAGATATATATCTGAATTTGTACTCCTGTGTTACACAAGTACTGAACATATACACACACCTACGGCATTATTCATACACACACTTACTTTCCACAGCTAATAACAGTACATATGCTCGATCACATGGTGTCATATCAATTTTGGCAAATGTGCTTACTCTTGAATACTTCACTGAAGTGTTTCACTACATTTTCTTAGCCATGACTTTGAGGGGGTTTGCGAGACATAGCACCATTCCACATTTTTCTGTCATGTCTATACCAGTCTCCTTGAGCTCTTCAGGAAGGGTCCATTCAAACTGATGCACCAGTGTCCCCAGAACAAGGTACATCACTTTTTGTGCTAGTGGCAATCCAAGGCAAATGCGTCGTCCAACACCAAATGGAACAAACTGAAAATTTTGTCCCAGATAATTGATGTCATTGCCGATGAATCTCTCGGGCATGAATTTATCCGGGTCATTCCATGCCCTAGCATCTCGGTTGATAGCCCATAAGTTCAGAATTACGTTGGTGCCTTTAGGAATGGTGAAGCCCTGGACCTCTATCGTTGCCTCGGCTCTGCGAGGCACCAATGGCGCAACAGCACGAAGACGAAGGGTTTCTTTCACAACGGCCTGAAGATATGGGAGCCGGGCGATGTCAAATTCTTGGATCTGTGCATTCGTGCCAATGACATTTGTGATCTCCTCCTTTATCTTTCGCATTGACTCTGGATTTTGCAGTAGATCTGCTATTGCCCACTCGATTAATACCGAGGTCGTACTGGCTCCAGCACCGTATAAATCGGTAAATAATACTCTCATTGCGTCGTGGCTTAGTACGGAGCCCTTCTGTTGCCACTCGCGCTCCATGTCGAGCACCACGTTTAGCAAGTCGTTCTTGCCAGCCTCGCCGGCGTCCCGCTCGGGCCTGCGACGCGCAACCTGCTCGTCGTATTGGCGGTACGTGATGGTGAACAGTTCCGCTACCCTGCGGCGGACGCCCTGGAGGTCGAGGGCGGCGATCGCCGGGAAGAGGTCCGAAAGGTTCGCCGTGCCGATCAGCAGCATGGCCTCTTCCACCACCGACCTGAACACGGCCGTCGATTCGGGGTCCAGGTCGACGGAGTAGATGGCGCTCAGCATCAAGCTCAGCGCCATGTCGAGCGCGACGCGCCTGACGTGCACGGGCTCGCCGCGCGCCGCGAGCTCGGAGACGCCGCGGACGAGGCCCCGCACCTTGTCCCGGCACAGGGGCTGCAGCGCGGCGAGCCGCCTGGGCGCGAGCAGCTCCGCGGTGGAGAACCTCCGGATGGCGCGCCACCTGACGCCCGGGTGCTCCAGCCCGAGGAGGGAGTTGGCGCTGTGCCCCATGGCGTTGAAGGCGTCGGCGGTGGGGCGGCCCGCGAGGTTATCCTTGTTCTTGTGGAAGATCTCGCGCATGGCGTCCGGCGTCGAGACGACGACGGTGAGGACCGTGCCGAGGCGGAGCGACATGACGGGGCCGTAGCGGTCAGCGAGGCGCGCGAGGGAGCGGTGCTGCTGGTCGCCCTTCCCAAGGGCAAGGAGGTCGCCGATGAGAGGCTTCGGCGGCCATGGGCCGGGTGGAAGGCGGCGGCGCGCATCGGCGAACAACTGGAAGACGTACAGGGAGAGGAGGATGAAACAAACCCATGGCAGACATGCCACCAGGAAGAATGCCATTGTGGTGCAAATTAAAACGATACGTCGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0204700.1 | 3 | 7897276 | T | G |
| Osa03LNT0204700.1 | 3 | 7897685 | G | A |
| Osa03LNT0204700.1 | 3 | 7897701 | C | G |
| Osa03LNT0204700.1 | 3 | 7897979 | A | G |
| Osa03LNT0204700.1 | 3 | 7899198 | A | G |
| Osa03LNT0204700.1 | 3 | 7900167 | A | G |
| Osa03LNT0204700.1 | 3 | 7900638 | T | C |
| Osa03LNT0204700.1 | 3 | 7900664 | A | G |
| Osa03LNT0204700.1 | 3 | 7900882 | A | G |
| Osa03LNT0204700.1 | 3 | 7901087 | T | A |
| Osa03LNT0204700.1 | 3 | 7900706 | A | G |
| Osa03LNT0204700.1 | 3 | 7897689 | C | T |
| Osa03LNT0204700.1 | 3 | 7900625 | A | G |
| Osa03LNT0204700.1 | 3 | 7900689 | A | G |
| Osa03LNT0204700.1 | 3 | 7898988 | C | T |
| Osa03LNT0204700.1 | 3 | 7899041 | T | C |
| Osa03LNT0204700.1 | 3 | 7899119 | T | C |
| Osa03LNT0204700.1 | 3 | 7898636 | T | C |
| Osa03LNT0204700.1 | 3 | 7898615 | C | T |
| Osa03LNT0204700.1 | 3 | 7898909 | C | T |
| Osa03LNT0204700.1 | 3 | 7900451 | C | A |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa03LNT0204700.1 | DTM_#DNAt_MULE_japo_Os0120 | Chr3 | - | 7898605 | 7899158 | 553 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0204700.1 | osa-miR5807 | Translation | 5.0 | 13.28 | 1 | 24 |
| Osa03LNT0204700.1 | osa-miR160c-3p | Cleavage | 4.5 | 21.152 | 1 | 21 |
| Osa03LNT0204700.1 | osa-miR169a | Cleavage | 5.0 | 18.82 | 1 | 21 |
| Osa03LNT0204700.1 | osa-miR169b | Cleavage | 5.0 | 18.82 | 1 | 21 |
| Osa03LNT0204700.1 | osa-miR169c | Cleavage | 5.0 | 18.82 | 1 | 21 |
| Osa03LNT0204700.1 | osa-miR435 | Translation | 4.5 | 15.528 | 1 | 20 |
| Osa03LNT0204700.1 | osa-miR815a | Cleavage | 5.0 | 16.61 | 1 | 21 |
| Osa03LNT0204700.1 | osa-miR815b | Cleavage | 5.0 | 16.61 | 1 | 21 |
| Osa03LNT0204700.1 | osa-miR815c | Cleavage | 5.0 | 16.61 | 1 | 21 |
| Osa03LNT0204700.1 | osa-miR5151 | Translation | 5.0 | 17.676 | 1 | 22 |
| Osa03LNT0204700.1 | osa-miR5157a-3p | Cleavage | 4.5 | 20.651 | 1 | 24 |
| Osa03LNT0204700.1 | osa-miR5157b-3p | Cleavage | 4.5 | 20.651 | 1 | 24 |
| Osa03LNT0204700.1 | osa-miR5505 | Cleavage | 5.0 | 20.815 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0204700.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0204700.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0204700.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0204700.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0204700.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)