© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0205500.1
CAACAGATGAAGGTGTGCTTTATATTTGATTGAAATACAAAGTATATCTCAAAAGAATTACAAAAGATTCATTGCCTTGTACAATTGTAGAGATTCACCATGTTAACAAGTACAACTCAATCTAAACGTACGATCTAACAGCTTGCAAGGCTCCAAAGCAATTTGGTATTATTTATTCCTTTTCCACCTGCATTTGGGAACATTTATTCCTTGTTGGTTGTTGCCTGCTTTCTACACAGAAGGTTTTCTTGCTTCACCCCCTCAAACTACTTTTGTTTCCTACTAACGAGCACTATCAAACCTGTCAGGAGCATGCAGCTTCCACCACTAGACTTTTTGTGACCCCACTGCATGGATCTCCAAAGTTATTCGATGACACTGGAACACTGCAATTGGTCATTCCAACACAGGCCTCTTGAACAACTGCAAGAGCCTGAGAGCTGCTGCATTCACCATGGTTGTAGTTCCCACAGGTGCCACTCGGTGTCCCAAAGCTTGCAAACTTGATGTTGCTGATGACCTGACCTTCTCTAGGGCACTCCAGGCGAAGTGCTGGTCCCTGCGTCTGAGACGTCTGTTGGGGAGAGATCCAGCTATCGATTTGGGCTGGATGCATCTCTGAAACATGTGCACATATACTACTTGTCTGCCTTGTTGTGAAGGATATCATGCTTGGATCACCACCAAACTGCTCAAAGAGGACTAGATCATTGCTACCAGGTTGGAGAAATGACCTGGGCACGTGGTACAGAGTTTGTGATGGCTGCCCACATTTCTTTAGGCACTTGTTCGAACTATAAGCTCCTCTGTAGTTGCATGAGTTTACACAGCCACTTTGTGGAGCCAAATTTGTTGGCCAGTAGCGACCAATGCTCTGGCCATTCACCCATGCCTCCCCTTTCCCCATTCCTGTGAAGTCTATGGCAACAGGGTCATCACCTGCAGGAGCCGTAAACTTGGTCTTGTACCATATCAATGGTTGGTTGGTCGGGTATGCGTTGTCTGAAACCCATTCTGGTGAGGCTTCTGAAGGATTATACAGATGCAAGTCTTCTCCTCTGAGTCCAATCTGGTATGTCCAATCTGTAGAAGATAGATTAAGGGCACCATTTGGTCCACTCAACTTTACTGGACCAGTGACTCCAGCGCCAACCAGGTCAAAGAATGCACCATAATTCGATAGCCCAACTGTTGTGCTCAGAAGATCTATTTTGTTCTTCCCAGGTACAAGTGTAACTGGTGTCTGCAATGAGATGAGCGAGCTGCTAGCACTGCCCTTAGCACTTCCTGCTAGTTTGCCATTGATGTAGATCTGAAGAACATGTCCAAGTGAGTTGACAAGCAGATTGGACTGGCTGCCGTTTAGATATGGTTCATCACCTTTGACAACGATGCTTGTTGAGTACCACAGGAAATCACTGGCATCGGCTGTGGTGTTTATCTGCTCCATCAGTCCAGGTTTCGTCAAGGCGTTCTCCTTTGTAATACCAACAGGCTCTATGGCATAACTCCAGCCAGCTGTAGCAAGTTCCGGTGTGATTAATGAATCATCAGTATCTTGGATACTTGATCCCAGGCTTCTCATTTCTGAAGTTGTTACCTGAGAATTGATCTGGGCTGTGTTCAATACCACATTTTTGCAGTCAGGAAGGATGCTTACAGACCAGGCAGGGAGCTTATACGTGTTTCCGTTGAATTTGACAGTTTTATCAGACTGAGCATCCACGTTGGCAAGGAATGCTGCGCATATTGAATTGTCAGCAGTCTGATATACGGTTGCCTCAGTATTTTGACCCAAAGAACTATATGATGGCTCAGCTGCTATGAGTGCTGGTTCGCACAGCTTTATTGCCTTGTGCACATCCCTTAAGTGGCCCCACTTTGGCTGCCTGACCATCCCATACTCATCAATAGGAGCATCGTAGTCGTAGCTCGTGGCGATGAATGGCCCTCCCGTGCTTCGTCCGAAGTTGGTCCCCCCGTGGTACATGTAATAGTTCTGGAACGTGCCGCCGCGCTGGTAGAATCGCGCGACGGCGAAGGCGAGGTCCTCGGCCGGCCGGTACGGCACGGCGCCGCCGAAGGAGAGGAACCACCCGCTCCAGTTCTCCGTCCACATCTTGGGCTTGCTCTTGGAGTTCGGCGTGAACTGGTCGCAGTAGAACCCGTTGCACGTGTTGATGAGGGGGTCGGGGGCGTCGGACTGCTGGCACATGACCCACGGCACGCCGGTGTCGAGGGAGACGGCCATCCCGGCGGCCCACCGCATGTAGGCCTTCCCGGCGGCGCCGTACGCCGAGTCGATGTTGCCGTACTCGTTCTCGATCTGCGACAGGATGATCGGCCCGCCCTGCGACGCGTACAGCCCCGCGCCCTTCATCGTGTCCACCACCTTCTCCGTGAACCGCTGCATCTCCGCCTTGAACGCCTCGTTGTCCGTCCGGAACTTGATCCCCGGCACGAAGTGCAGCCATACCGGAAACCCTCCGTAGTTCCACTCGGCGCAGACGTACGGCCCGATCCTGAGGTGCACGTAGAGGCCGGCGTCGGCGACGGCCTTCACGAACCTGACGAGGTCCTTCCTGCCCTCGAAGTCGTACTGTTCTTTTTTTTTCGTTGCAAATTCATTTGAGTCAGTCAGTTAGTTGATCGTTAAACGTCCGTGTAGCAGAAGCGGAGTAGTGTGATAATGCCGCTTTAGAATTTCCAGATAATGATATTACTAATACTAGTAGCAGTAGCAGTTCACGGGGAGAAAATGGGGAGAAAATTGTAATATTGGGATTGCAAACATAGAGGCTTCGCTGTTTTGACACTCTGAGTGAATGACAAATGGGTCCATCTGTATCTATAAAATGTGGATCCAATGTCATTATAGTAAAGGTTAATGTTTACACCGTTGTAATTGTAAATCACCAGTTCACGGGAGGCAGAAAGCCTAGAAGTGAGTGAGAGAATAAAGCATAGGGTGCAGAGGAAGCAAACACCGCCCTTTGACACATGACGGCCAGGAGGGAGAGGAGATGATGACGGAAAAAAAAAGGAGAGAAAAGATATACACAGGTCATTAATTTGATAATTTCATTGTGGTACACTATTAATGGAGAATACTACTACTACTAGTAGTGGTACTAAGTAGCAGTTGAGAGAGGAGTACGTGCCTGTCCCCGGACGGCCTCGTGAATGTCCCAGAAGACGTACGTCTCGATGACGTCCAGGCCGCCGTCCTTGGACTTCTGGATCAGCCCCGGCCACATGTCGGGGGTGCTCCGCGGGTAGTGGATGGACCCGGAGACGAGCACGCGTCGCACGCCGTCGATGACCACCGCGCGGTGGTCGTACGTCACGTTCGCCGCCCGCGACGCGCCGACGAGGAGGCTTACCACCACCACCACGGGGAGGAGCAGCAGCCGCAGCAGCACACCCACCGTGGCTGCCGCCATTACTGCCGCCGCCGCCCCGTTCGGTGTCGTTCTATTATCACCGGCGCTAGTGCGGACGATGACGAGGAGCAGCAGGAGGAAGGAAGAACAGAGTTGCTCGGTGGGAGAGGCAAAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGTTGCTGGTTGGAGTGGCGCGGCGGGACGGAAATAAATGGCACGCACTCAGCGGCAGCGACGAGGCTCGCTAGCGGAGCAGCGGGAGCGAAAGCGGCTGTGTCTCTTTCCCGCGGATGCGGGTGGTGGTGCATCTGCTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0205500.1 | 3 | 8197989 | T | C |
| Osa03LNT0205500.1 | 3 | 8196189 | T | A |
| Osa03LNT0205500.1 | 3 | 8196419 | T | C |
| Osa03LNT0205500.1 | 3 | 8196609 | T | A |
| Osa03LNT0205500.1 | 3 | 8196982 | A | C |
| Osa03LNT0205500.1 | 3 | 8197236 | T | C |
| Osa03LNT0205500.1 | 3 | 8198674 | C | A |
| Osa03LNT0205500.1 | 3 | 8198826 | C | T |
| Osa03LNT0205500.1 | 3 | 8200889 | A | G |
| Osa03LNT0205500.1 | 3 | 8200905 | T | G |
| Osa03LNT0205500.1 | 3 | 8200913 | A | G |
| Osa03LNT0205500.1 | 3 | 8200966 | A | G |
| Osa03LNT0205500.1 | 3 | 8200973 | G | A |
| Osa03LNT0205500.1 | 3 | 8200987 | T | A |
| Osa03LNT0205500.1 | 3 | 8201854 | G | A |
| Osa03LNT0205500.1 | 3 | 8200941 | A | G |
| Osa03LNT0205500.1 | 3 | 8200898 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0205500.1 | osa-miR5801 | Cleavage | 4.5 | 17.428 | 1 | 24 |
| Osa03LNT0205500.1 | osa-miR156f-3p | Translation | 5.0 | 18.183 | 1 | 22 |
| Osa03LNT0205500.1 | osa-miR156h-3p | Translation | 5.0 | 18.183 | 1 | 22 |
| Osa03LNT0205500.1 | osa-miR396a-3p | Cleavage | 5.0 | 20.581 | 1 | 20 |
| Osa03LNT0205500.1 | osa-miR396b-3p | Cleavage | 5.0 | 20.581 | 1 | 20 |
| Osa03LNT0205500.1 | osa-miR397b | Cleavage | 5.0 | 14.17 | 1 | 21 |
| Osa03LNT0205500.1 | osa-miR156l-3p | Translation | 5.0 | 18.183 | 1 | 22 |
| Osa03LNT0205500.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 21.026 | 1 | 20 |
| Osa03LNT0205500.1 | osa-miR319b | Translation | 4.5 | 21.026 | 1 | 20 |
| Osa03LNT0205500.1 | osa-miR444a-5p | Cleavage | 4.5 | 16.297 | 1 | 21 |
| Osa03LNT0205500.1 | osa-miR1846d-5p | Cleavage | 4.5 | 14.44 | 1 | 22 |
| Osa03LNT0205500.1 | osa-miR396f-3p | Translation | 4.0 | 17.941 | 1 | 24 |
| Osa03LNT0205500.1 | osa-miR2877 | Cleavage | 3.0 | 18.254 | 1 | 24 |
| Osa03LNT0205500.1 | osa-miR2922 | Translation | 4.0 | 17.132 | 1 | 20 |
| Osa03LNT0205500.1 | osa-miR2922 | Translation | 4.5 | 17.701 | 1 | 20 |
| Osa03LNT0205500.1 | osa-miR5071 | Translation | 4.5 | 12.077 | 1 | 21 |
| Osa03LNT0205500.1 | osa-miR5522 | Cleavage | 5.0 | 16.984 | 1 | 21 |
| Osa03LNT0205500.1 | osa-miR396c-3p | Cleavage | 4.5 | 20.581 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0205500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0205500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0205500.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0205500.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0205500.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0205500.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)