© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0017900.1
GGTGAGATCAATATATACATATGCTAATTATGTCTGCAACAACATGCATGGTTCAGGGAATTATTTCACCCAAATGATGTTTTCTAGTTGCTTCAGCCATACGCTTTACAGAAATACCTTGCAATTTAGAAGATGGATTGCCCATGTTCACTACAAAGTCACCAACCCGTTATTTCAGTTTGGGAGCAATCCTGCAACCAAGACATGCACAGAACGAAACAAGCAGAGTTTGGGAGCAATCCTCTATAAAAAGGCCTCTTCATGACCTCAGCGGTGTTGCCTCACCGACATCTGGGGATGACATATTTCCAGGATTTTGGTTCTAGTAGTTTAGGCCCTTCCCATGGATCGCTGGAACGCATGTTTGACAAGTCTTTCTCCTCAAGGCTATCAAGACGTTGCTGGAGGCGTCCAGGAAGTGACTTCATAGCTGGGCAGTACTTGATTTCAAGTGTCTCTAGGGAGGAGTATGCTCCAGGGCCATCCGGCAAGGACACCAAGCTTTTGCATCTGTAAATGCTGAGACTTGTCAAGGACGGCAAGTTCCCCAGGCATGGTCCCAAGGACCTCAAGTTCTTACAGTCACTAATATATAAGGAGTCGAGTGCATCCAGCTTCCCCGATAGAAATCGGACGTTAGGGCAGTTATACATGTGCAATATTTGGAGCGATGGTGGGAGATCAGGAACCTTTGTGAAGCTATCACAGTGCCCTATGTTAAGGTGTTCTAGGCATGGTAGAAGATGCTCCGTTGCTGCAGCTGCTGCTGATGATGATGGGTCTGGCATCCTTTTGCTCAATAATGTGGTGAGCTGCTCTGCATGTGCACTTCCCGATTCACTATCCTCCTGTTTACCATATATCGATTTCAACCTAGGACAGCGATATATGTCAATAGTCTTGAGGGACCAGGGAAGATTAAATATCTCTGTTAACTCTTGGCAGTTGCGTATTCCTAGAAATTTCAGACGTGGTAGGAGCTGCCCAATTCCTTGAATGGGCTCTCCATCCACTGGCATAATGCCTTTTAGATTTTTGCAAGACTCAACTGTTAGTTCGTTCAATGACTCTAGGCTTTGGAATTCTCTCTGTGGCCAGTGGATGAGCACATCACAGGATTTGATTTCCAGTTTTTGAAGATATTTGCACCATTTCCAAAGCCCAACTGTTGGTTTCGATGGTGTTGTGGGGAAGAACATATTGCAACCATCTAACTTCATTTCTGTAACAGAAGCCTCGCTATTCCATATATCCTTGTCATCTAATGTTTCTACAGAGCTTTGATCTGGTATTAATGCTGCTTCAATGTCATCGATTGACAACTCCATTTTGGACAACAAAGACATGTATCTAGAACCAACAACTAACAGTGACAGGTGTGGTTTATTTTCTTCCAGCTTCAATGTTCCAATTTTTGGTGCTTCAGGGATAACTGTCAACTCTGGACAGTTCTTAATATGAATATCCTCAAGCACAGGAAATATTGCCTCATCCCCTAGTTTTCCCTCCATTGTGCCCCATCTCTTCAAGCTCTTCAAATGTTGCAACTTGAGTTTCTTGAGTTTTTGAAATGCAGAGCACATAATGACATCACTAGCACCACTGCATAGGCTTTGCAATTTATTCAATCCTGTTAAATGCAGAACTTCAAGGGCTGGTAGCTTCCAGAACTTCGGAATTTCCTTGCATAATGGGCAATCAACTAAATGGATCTCTGTCAAGTTCATGAATGTACATACATCTGTCATCCATGTCGGGAAATTGGTTCCTTTGAACGACTGTACCTTTAGCAATTGTAGCTTAGCATGAGGCCTTAGAGCGCCTAGAACATTCTGATAATGTTCTGGGTCCTTTTCTATGTCATTGCTCCATTTGAAACACAAATGTGTGAGATCCACCTTTTCTTTAATATTTGCTGCAATTGCTTGTTCTTCATTTGCATTTTCTAGTTTGCCAAGCTCCAGCTCACCTCCAAGATTTAAGTCATGTATCTCTCCAACATTACTACAATCCGAGCTATTGCCCACAACAAAATATGTAAGTGTCTGTAGTGCAGTTACTTTTCTCAGTTCTGGAGGCATGCACTCCAAGTCTGTACATCCTTGAGTGTATAGGTGCCGGAGGCTAGTCATATACTTCATATTTTTTGGAAGACAACGAAGAGAACAGCAATCAGAAAGATCCAACGTTTGTAAATTATATAATATGCTTATTTCCTCAGGAAGTCTTTCCATATTCCAGCTATGAGAAAGATTGAGATACCTTAGATGATGCAAATGCTTTGCTTGAATTAGACATGGTCGCCCACGAAAATTAGGTATGCATAATGCTCGTAGAGAATTGTATTTCAGTAAATGTTGTGGGAAGCCATCTAAGTGACCAAAGAACATCACTGTCCGGAGAGGTAGAATTCTTTTCTCAATAAAAGCATCCAAAAGGGTATTCATTCTATGATATGATGAAAACAGATGGCGAGAAGAATCTTTCAACAACTGGATGGAATTAGGCCTACCCATTACTGTAACACATTCTTCTCTCATGACATACAAAGCAATGTCATGCATGAGATCATGGATCTTGCACGTCTTCCTAAATTGGCAGAGCTTATCCCTCCTGTACATCTTGAACAGTGATGTTTCGTCCACATCCTGAAAGAAGGATCTTCGAGCCAGTTCGTTGAAAATCCGGTTGCCAACTTTTTCAAGGCCAACTCCATTCTCAGAAGGAATGAAGTCATTTGCCATCCATAACTTTACCAACATTTCCACGTCAATCTCATAATCTTTCGGAAATATAGCACAAAATGCAAAGCATAGCTTCATTTGTGAAGGCAAGTCATCGTAGCTAAGTTTGAGAATCGGTAAGATCCCACTATCATCATCAAAGATGACGCTTTTGCTTAATAAAGTATTCCATTCTTTGGGAGTGGTTTTATTGCTCAGTACAGAGCCTACAGCTCTTGCAGCTAAAGGAGAGCCAACGCATCGATCCACAAATTTGTCAACCATATCAACAAGTTCACTGGGTTTTTCCTTTTTCAAATAGAAAGCTCTTCTTTCAATTATTTCCCATAAAAATCTGTTGTCCAACGTAGTGAGGTTGTGTGCTTGAACGGTTCCCATAATTTGAGCAACTTCTGCAAGACGAGTTGTTGTTAATATCACACTGCCCGCTGCACCCTGTTGAAGGCAAGTCTTTAGTTTTGACCACTTATCAACATCACGATTCCACACATCATCCAACACTAGGAGAAACCTCTTTCCACTAACTTCTTGCTGGAGCTTCTGAAGCACATTGTCACAATCTTTCTCATTTGTGGTCATGCTAATCTTACTTGCAATTTTACTAAGATCAAACTCATCAGACACACAAACCCATCTATTCAACTGGAAATGCTCCTTGATTTGTGGTTCATTATAGATAAGCTTTGCAAAAGTTGTCTTTCCTAGACCACCCATGCCCACTATTGGAAGAACCATTATGTCATTGTTTTCAAGTAATGATCTCACAATCTTTTGCTTCTCTGTCTCTCTAGATCTTTCCACAATATCTTTCTCAGAGTAATCAATGATGGAATCTGTTTGCCTCCACTGCTTAGATGCCAATGATTGCCGCTGATATTTGAATCCAAAAGCATTCATTTCTGCCACAAGGACCTCAATGATCTGAACTATCCTACGAAGTTTTTTTCCCATCGTATAACGGAACATGATACGGTTATGGGTAGGAAAGAGTTTTACCGCATCCATGCCGAGTCCTCGATAGTGCCCATTCTTCTTTGCTTCACGACGGAGTGCCTCGTACTTGAACTCATCGAAGATGTCATTAGCCTCATAGGCCACCTTCTTGAGTGCCTCAAGCCAGGCTTTTACTCCTTGTCTGTGGGATGCCTGCTCCTCAGCATCGCTGATGACATCGAGGATAGCTGGCAGCTTGCGCTTGAGAATCTCATGCTGCTCCTCCATGCCCTCCATCACCTTGTACTGCTCCAGCAGGTAACTGGAGGCCTTCTCCTTCACCATTGACACTAAAGGCCCGATCACCATGCTGGTTACTAGATCAGCCATTGGAACCACTCAAAATCACAACGCACAGGAGGACACAAGGAAACACAGCAGCATTGCAACAGCTCAGTCGGCATTATTTTTGGAATAACGAAGTAGCAGCTGAACCTCTTATCATATCACGTTTGCAGTAGCACAGATTGAGCCATCTCGTTTCTATTTTCACAATAACATTTTTCAGGATGCAAAATGGCCACATGCTTCTCCCTGATTAGCCGTTTGAGAGCATGTACAGTGTGTGATTATAATAACATCCACTTGGAGGGACTTAAATGAATTCGTTTATTGTCCTGCAGAGCATAGAACTTGTAACTGGCCTCTTTTCTCATGGCTAAATTTCTTTGTTCTCAGTATGGTGGCCTCCTCTATACTTTACCTGTCAATAAACCACCAGTAATGTATGGAATTAGATGCATAATGTAGTACAATTTGTCTTGCTATATATGTGTGTTTCCTTCACACAGGCACAATGAAAGAATTGGGCATTTGCTGAGGCTGGTCTACCCCATTCGACCACTGGAAGTAACTTGCAGATATGTGCTACTCAACAAAACAGGCTGAATCAATTTATTTGTGGGCCTACAAGAGGTAATGCAACTCGGATGGATGGTGATCCATGGGCTCTTGAATAATAAACTAAAACAGCGATGATGTGGTCATTCAGTTCCTAGTTAGCACAAACACGGTTTGTGCAATTTCTATTAGCAATGCAATGCAATTAGATATTTCTTTCTACTTCATCACTTCCTTTATGATACCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0017900.1 | 1 | 14603426 | C | T |
| Osa01LNT0017900.1 | 1 | 14603004 | A | G |
| Osa01LNT0017900.1 | 1 | 14598424 | C | G |
| Osa01LNT0017900.1 | 1 | 14598481 | T | C |
| Osa01LNT0017900.1 | 1 | 14598712 | C | T |
| Osa01LNT0017900.1 | 1 | 14598743 | T | C |
| Osa01LNT0017900.1 | 1 | 14599109 | G | C |
| Osa01LNT0017900.1 | 1 | 14599253 | G | A |
| Osa01LNT0017900.1 | 1 | 14599609 | A | C |
| Osa01LNT0017900.1 | 1 | 14599979 | A | C |
| Osa01LNT0017900.1 | 1 | 14600044 | A | T |
| Osa01LNT0017900.1 | 1 | 14600317 | T | C |
| Osa01LNT0017900.1 | 1 | 14600497 | G | A |
| Osa01LNT0017900.1 | 1 | 14600867 | A | G |
| Osa01LNT0017900.1 | 1 | 14601014 | C | G |
| Osa01LNT0017900.1 | 1 | 14601076 | G | C |
| Osa01LNT0017900.1 | 1 | 14601171 | A | C |
| Osa01LNT0017900.1 | 1 | 14601185 | G | A |
| Osa01LNT0017900.1 | 1 | 14601478 | G | T |
| Osa01LNT0017900.1 | 1 | 14601643 | C | T |
| Osa01LNT0017900.1 | 1 | 14599920 | G | C |
| Osa01LNT0017900.1 | 1 | 14601947 | G | T |
| Osa01LNT0017900.1 | 1 | 14602780 | G | A |
| Osa01LNT0017900.1 | 1 | 14604257 | T | A |
| Osa01LNT0017900.1 | 1 | 14604407 | A | T |
| Osa01LNT0017900.1 | 1 | 14604670 | A | G |
| Osa01LNT0017900.1 | 1 | 14603231 | A | G |
| Osa01LNT0017900.1 | 1 | 14602080 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0017900.1 | osa-miR5543 | Translation | 5.0 | 20.04 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR5790 | Translation | 4.5 | 17.4 | 1 | 24 |
| Osa01LNT0017900.1 | osa-miR5798 | Translation | 5.0 | 18.49 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR5805 | Translation | 4.5 | 11.249 | 1 | 24 |
| Osa01LNT0017900.1 | osa-miR2873c | Cleavage | 3.5 | 17.265 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR397a | Translation | 4.5 | 14.419 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR397b | Translation | 5.0 | 14.419 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR159a.2 | Translation | 4.0 | 21.089 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR169n | Translation | 5.0 | 15.882 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR169o | Translation | 5.0 | 15.882 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR172d-5p | Cleavage | 4.5 | 16.677 | 1 | 20 |
| Osa01LNT0017900.1 | osa-miR417 | Cleavage | 4.5 | 12.635 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR815a | Cleavage | 5.0 | 9.724 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR815a | Cleavage | 4.0 | 17.737 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR815b | Cleavage | 5.0 | 9.724 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR815b | Cleavage | 4.0 | 17.737 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR815c | Cleavage | 5.0 | 9.724 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR815c | Cleavage | 4.0 | 17.737 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR1440a | Cleavage | 5.0 | 20.646 | 1 | 20 |
| Osa01LNT0017900.1 | osa-miR1849 | Translation | 5.0 | 17.559 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR1850.1 | Cleavage | 5.0 | 11.268 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR1850.1 | Translation | 5.0 | 8.198 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR1320-3p | Translation | 4.5 | 19.723 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR2101-5p | Translation | 5.0 | 14.4 | 1 | 22 |
| Osa01LNT0017900.1 | osa-miR2867-3p | Cleavage | 5.0 | 10.523 | 1 | 20 |
| Osa01LNT0017900.1 | osa-miR5149 | Translation | 5.0 | 11.256 | 1 | 22 |
| Osa01LNT0017900.1 | osa-miR5490 | Cleavage | 5.0 | 18.587 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR5498 | Cleavage | 4.0 | 11.054 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR5505 | Cleavage | 4.0 | 19.402 | 1 | 22 |
| Osa01LNT0017900.1 | osa-miR5508 | Cleavage | 5.0 | 17.53 | 1 | 21 |
| Osa01LNT0017900.1 | osa-miR2275c | Cleavage | 5.0 | 11.495 | 1 | 23 |
| Osa01LNT0017900.1 | osa-miR2275c | Cleavage | 5.0 | 17.799 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0017900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0017900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0017900.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0017900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0017900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0017900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0017900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)