© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0205900.1
GCCGTCCATGAAATGAAATTGACACTTTATTAACTGAAACATCGAGTAATTGTACAAAGCTTTTTGTTGGTGATAAACGATTCACACCACGTTCAAGTACAACAAAAGGACAGTACCTTTCACGCCCTTATCTAATATACTCGTGCTTCAAAAATAGCTGACAGCACTAATATGTGTTGGGCATTGTACAATAGGCAGTAGCACTTAATAATAACAACGGCATCCACGTTACTGGAGGAGAAAAGGCTACTGGTTTGGCTCCATAAGCTGACATTAGCCTTGAGGAAAGCTTCAAATGTATCACCGCAATGATACAGCACAACAATAGGAGCACCCTCCTTGTCCAGCCGCCACAGAATTTCATTACCATTGAGAGAATTTTCTTGTCTGAGAGGTTCGCTAAAGACACTGAAGCACTTGGCAGTAGATATCCTGACTCAGGGTTTGAATTTGTTGGGTTGACCGTGTTTTCTGTTCTTCTGCTGTGCCGCAAACAAGCAACAGCCTTCTCTGCAAACAAACTATATATTACAACTACAACTGGGACAACCACCAGGTATAGGAAAGGCAGTGTAATAACCAGCACATCTGGGTTGCTCGATTTGTTCCAGGTCAAGTCTTCACCAAGAGATGGGATGCTCCATCCGGATAAGTACATTTGAGCAATTTCTCCTTTCTCAGATGTCGCATGACCCCAAAACCATGGCATTTCAATAAGCCAAATAACATATATGAGCAAAGAAAACCAGATGGGTCTACTCCTTGCACCCTCCATTAGAAACCAGACCAACCAAAAGTAAGCTTTCCTCGGCTGGATAGGGGATAGCATAACTGACACGGTCCATCTTTGGTATGTCAAACTTTTCTTCATAAAATGATACAGCAATTTGGGAGCAAACAATAGTACAATTATGAAGGCAAAATTACTCCACAGAAGAACTTGATACATGTCTTCCCATTGGACTTCAAAAATCAAGTAGTTCAGACATGGACGTGATTGAATTTGCACTTTACCCTCAACTGAAAATGGTCGTCGCTCGCTTGATGTCTTCCCACCCTGAGAATCCTGAGCAAAAACTTGCAGCCAGTAGCGAGTAGGGGATGGACTTTTGTAGTTTTCAGCATTCCATTCCGCATGGAACAAAGGTTTGTGAACAGATGGTGTGGCAACAAGCTGCAGTGGTATTTCTTCAACTATCTTAAACTCATTATGAGAGTCAAAAACTCTTGCACTCACATTGCGGATCACCTGATTAGAGAAAACAAGAACATTTATATCATTTCTCGTTGACCAATTCATTGATTCCAATGTATTCATACTTCTTGAATCTGTTGGGTATGTGATCAAGATGGAAGTTTGAAATGCCTGTTTTAGTGTGTGGTCTATGAAAGAGATTGCACCTCCATCAATTGCTAAAATCCTCATCAGTCTTGACTCTTTCCAGTCTCCAAGTTCCCATTCCCAATAGCTTGATTTCTGCTCTTGTGTTGTTGCACTCATTTCATGAAACCGCCAAAGCTGCTTACTAATTTTCGCGTGCAGATGGCCACATAGGTATGCTGAAATTGACTGCTTTGCAAATATACTTTCATAACGTTGTCCTTTTTGAGATGAAGTAGTGAATGACATAGGGTAATGTCCAAAAACTACTTTTGTTATTGGAACATTGGAATGATTGGACCAGTATTGAAGTTCTGAATTAACAGCGTCTATCCTCTTATCAGTAGGATGGCCAAATAAATTAGCTGGATATCGAATGCCAATACTCATTGTATCATCTATGCCAAGGAAGAGATAATTCCTGCGTCCCTACAGTACCTTTTAGGATAAAATTCAGGCCCAGCATTGTAAGCAGAATTAGCAGAGATGCGTGGCATATAAATGGTACAAGAATTTTGACAATGTATTATGCACAGATAATCCAACATAGACAATGTGTTATGCACAGATAGCCCAACATAAAAAAAAAAATCTCCTCTAGTACTGTTATGACACCATTAGAAATCTATATAAGTGCTAGAGACAAAGTGGGTTACGGAAATTATAAGGCACAGATAAGACATAATTTGATTCGTAATAGCTGCCAAAGATAAATAGAGTTATAGTTTAGTAAATTTAACTACCATTGTAGGTTGACACAGGCCAGTTATGGTTTAAGTGCTGAATGTATAGCCACCTTCATCTGTCCTGCTATTGAGTGTACATTAAGCGAGTCTGAAGGTGCATTGACATCAGTATAGCACACTACATCATTATTGTTACATATAAATGCAATTATTAGTAAATTATAATTGATGGTCAAGTCTAGTTAGCAAGAGCTGTTCTCCATTGAGTAAGATGGTTTAGTGCTATGTTCAAGCTTATCGTACATTTCTGCTTCAAGTATCATCAGTATGATATTGAAGCATGATGTATTTGTAGTACTACATGCCCAGTATCACACGAGAGTAATATTTATTATGGACCAATAGATATTGTTCTACCAGCTAACCAAAGAGGACGTTCAATAATCAAGGCAGAGGAGCATTAATTCTGTGCACAGTAATCAGCGGTATAAAGTGCAGGTCAATGTTCAACTGAAGCTCTGACAGCAAATATGTTATAGTATGCTTTACATCTTCAAAGAAGCAGAATATAGAACTGGATTAATTGAAAGATAACTGTACACTGGATTATGCGCATGACGAATAATAAGTCATGATAAACGACTATGAACAAAATTAATTGTGCCTAACAAGGAGATCAGACAAGAAGATAAGGAGTACCTGAAGCAAAATGCTACTGATGGTGCTTAATCGGTCAAGCTGTGAGTTCACACTGTAAGTTGAGAAGAAATCCAATTTTCCTCCCCTATAGGGAACTCCATATGTATCATGATTACCTCTAATATCAAATATCCTGCTCTTATCAATACCACCTATTCCAACAATTGCATCAATAGCTTTTTTGTATGTAATCCATTCCCTCTCATCTTGTCTTGACGTAGTTTTTCTCCTATTCTTTGCATCTTGTTAACATCCCACGAAAAAACTGGAAATTATTATACAGTCATAGGAATATATAAAACTACAAGAACAACATATACATTCAATTGCATCAACCATATATGTGCTTGTTTCATTTCCTTATTATTCTAGCAAGGGCTTTCTGTCTAACAAATTAACATGTACACTCAAGGTGAAAAAAGGAAATGCATTATAGCAAGGGACGAAAATTGAAGTTATCCAAATTTACTACCAAATCAACTTTCCAATATTTGACCTTCCACATACAAATAAATATTTTCCAAATATAAAAAATACAGTTAGTAATGTTTTCAAGTGATTTGGGATTTATCTCCATTTGTTGTAACAAAGCAGCTTTCATGTATGTCGCCATTAGATACGATATTGGAGAATTTAATGGTTTATACAACAAATTCAGAGTCATATTCTTCATGCAAATAGTTGAAATGAATGTTAGGCCAATAACTCCAGGATATTTCCAGAATATGTTTATGGATGTTACGCTAGCTGAGTTTATTAGAAAAATGATCTACTAACCTTATGGTAGTTTGTAAGTTGTATGCTTTACCTTGCATTAACTAATGAAGCTATTCTCAAGTTTCATGGCATGGAGCCATGGACTCTGAGTTACTGTATCATTTGATCTTTTTAGGCAATACTTGGCAACCACAAATACAAATTCAACCTGCCTACGCTACATGGAAATGAATCAGAATTTTCTGCAGATTCTCATTAACAGAACATGATATTCCTTCGTAGTCAGTGCCATCATGTACTAGATGGGATTAGTTCAGAAGTACATGCGCATTTAACAGCACAACTGTAACAAAAAGCTCATGCTGTGAGCATAATTTCCCACATAGCTAATCGAGTTCACAGCTTATACGGAAGTTGATTCTACGTTCACAGCATAGCTAATCGAGTTTATATACTGCTATTTCCCACATATAACAATACCACTCAACACCGATCACTTGCAATATGTCAAAACCAGAGTAGATACGGTCTATTTCTCGGCAGTTGCCATGCTCCTTACCAAACAACTGTACAAAATGGATGCATGAAGGAACAATTCGTGACTTTTTTTTAATCAAATTTGACGATACATGAGAAGGGGGCTCGCCGCTCACCTGTGATGTCGCCGGTGACGAGGAGCAGGTGGGGGCGGATGGCGCGCAGGGCGGGGCCGAGGATGCTCGCGAGGTCGTCGGCGCGGTCGGGGTGGTAGGCGCTGATGTGGAGGTCGCTTACCTGCACCACCCACGCCACGTCGCCGTCCATGGAGAAGGCCGACCTCGCCACCGAGGCGCCGTCGTCGGCGACCACCAGCCACGGGGCACACAGCCGGTGGAGGGCGAGCAGCAGCAGAAGCACCAGCGGGGAGCGGAGGTGCGAGGCCATCGCTGGGCGGTGAACGGGTTCGGGATCCGGCGCGGCGGGGAATCTCTACGCCGCCGCGTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0205900.1 | 3 | 8437637 | A | G |
| Osa03LNT0205900.1 | 3 | 8437872 | T | C |
| Osa03LNT0205900.1 | 3 | 8438951 | T | C |
| Osa03LNT0205900.1 | 3 | 8439476 | T | C |
| Osa03LNT0205900.1 | 3 | 8439490 | A | C |
| Osa03LNT0205900.1 | 3 | 8440664 | C | T |
| Osa03LNT0205900.1 | 3 | 8441546 | G | C |
| Osa03LNT0205900.1 | 3 | 8441570 | C | G |
| Osa03LNT0205900.1 | 3 | 8440214 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0205900.1 | osa-miR5536 | Cleavage | 3.5 | 13.524 | 1 | 22 |
| Osa03LNT0205900.1 | osa-miR5796 | Translation | 4.5 | 18.801 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR5817 | Translation | 5.0 | 11.986 | 1 | 24 |
| Osa03LNT0205900.1 | osa-miR6248 | Translation | 3.5 | 3.045 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR6248 | Translation | 5.0 | 15.854 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR397b | Cleavage | 5.0 | 15.483 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR166g-5p | Translation | 4.5 | 17.676 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR166j-5p | Cleavage | 5.0 | 17.309 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR390-5p | Cleavage | 5.0 | 14.701 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR1428a-3p | Translation | 4.0 | 12.239 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR1429-5p | Cleavage | 5.0 | 9.991 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR1857-5p | Cleavage | 5.0 | 14.483 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR1428b | Translation | 4.5 | 12.239 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR1428c | Translation | 4.5 | 12.239 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR1428d | Translation | 4.5 | 12.239 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR1874-3p | Cleavage | 4.0 | 15.803 | 1 | 24 |
| Osa03LNT0205900.1 | osa-miR2093-3p | Cleavage | 4.5 | 10.738 | 1 | 20 |
| Osa03LNT0205900.1 | osa-miR2099-3p | Cleavage | 4.5 | 12.24 | 1 | 20 |
| Osa03LNT0205900.1 | osa-miR2105 | Translation | 4.5 | 12.726 | 1 | 20 |
| Osa03LNT0205900.1 | osa-miR5487 | Cleavage | 4.5 | 16.352 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR5487 | Translation | 5.0 | 12.587 | 1 | 21 |
| Osa03LNT0205900.1 | osa-miR2275c | Cleavage | 4.0 | 9.577 | 1 | 23 |
| Osa03LNT0205900.1 | osa-miR5518 | Cleavage | 5.0 | 19.636 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0205900.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0205900.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0205900.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0205900.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0205900.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0205900.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)