© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0206100.1
CCAAAAATCACAATTATCTCCCTTTCAGAACAAAAGAATTACACCTCTATGGAGAAATATGTTTATATACAATAGTAGCAATGGTAGTACACCCGAGCAAAGAATTGTAAACTCAACACAAGCAACCAAAATCGAAACCAGGATGATGACCAACAAAAGCTCACCGCTGGCCATTTCCTTCAACCAGAACCACCGCACAAGCCATCCCAACAAAAGATCACTATAACTCAAAAGGCAGAAATATATCGCATAATCACGACGCAAACAACTCTGCTGGCACATTTTCCAGCATTTGCATCCACTTTCATATCCCAATGAAGATGTCCAAACCGGTTTTTGGCAGATCTATAAATATCTGGCAAATCAAATGGTCTTCAGTGAGTAAAAACCACTGACAAAGCATCCCAGTAGGCCAAAGAACTGAATATAGATGTTCCTCTGCTGATCATCTCCTATTGGCAAATGATGCTAATGCATTAGCATGAGCGGGTGGCAGAGCACTCAATATAGGTTGCATTTGCTGACCATAAACAGATATCAAATGAGAAACGGCCTTGGCAACTACTGTTTTGACTTCATCACTCTCATTTGGGGAGACTACCACTTGGGCAAAGGCATTTATCACATCAGGGACTAGAGGAAGGATCTGAGGATGTGAAGATAATAATAAATTACAGACACAGCTATAGACAACCATGGATTCTTCATGATCTTCTTTTAGCGGCAAAGCTTTGATAAACACCGGAAGTACCTGGTTGAGTGGAATTGACTGAGGCTGCACCATTATCATCCTAGCAATGGCACCGGCAGCATTATCTCTAACTGCGTCATCAGGTTCAGAATCAGCAAACAAACGATGCAGACCATGGAGTATATCCCCGTAGTATTTCAGTGCTGCAGCACCCCCATTCTTGCACATCTCACCAACACAGAAAGCAGCATTTCTCCTGTTTGTCGCCTCAGATGATGCAAGTTCTTTCAACACCAAGGGCATTATCTTATCAACATAAGCAGAGATTGGAGCTCCCATTCCCTGAGCGACCTCAGCTAAAGTGGCAACAACCATAGTCTTATCTTGGGGAGGATGAGGAGATTTAGCAAATTTCATCAATGAATCAAACAATTTTGTAAAGATAGGATCAAAATAAGATCCCATCACTTTTGCAAAGGCGGGCAAAAGATCTGAAACTGCATCCATCAGCACTTCATCATGATCAATATCACCGTCGTCTTCACCATCCGACTCTACTTGCTGGCAACAAGATTCTTGACGCAAAAGAATGAGTGTTGCATCAGCAAGTCGTGTAATATAAGGTTCAATTATGGCAAATCCACAATCCCTCACGATGTCTGCTAAGCTCGTGCAAGCTTGAGCAACTACTTCTTTGTCATCATCCTCTCTCATGGTCTTGATATAAATGTTCATTACTGTATCAAGAATATCCTTCTGCTTCTCTAATACATCAGCATGTGCAGGAGGTATTGCTCTTATTGCAGTTAGGATATGTTTTAAAGAAATAATTGCCTGGAGCCTGACATCTTCATGAAAATATCCACTGTGCCTAATTAAGATCTTCAATGACTCCTCCAAGTACGGAGCATAGGCACTCTTTGTGTGGAGCGCAAAAAATCCAATGGCCTGAGTTGCAGCAGCTTTCTCATCTAATACTCCAGTCCTTACACTGATATTTCGAACCCTCGGCTCATCATTTACATCATCATCAGAAGAGACACCACTGAATCCATTGTCAACACTATCAGCATCATCTATGTCCACAGCAGAACCATCATCCAAGTTGCACGAGGAAAATGCAAGAGGTACAACATGAGGAAGATACTGTGCGAAACTATCATCCAAAATCTCAGCAACATTACTAAAAAAACCATGAGTATATTCTCTAAGCTCGCTATAATCCAATACAAAACCAGAAATAGCAGCTTCAATAAAAGGAGGCAGTATGGTTTCCATTCTTGCTCTGCCAACTGCCATTGCCACTATCCCAACAACCTCAGTAGCCCTAGCTCGTGCACACAAATCTTCATCATTAGTGAGTACCATAAAGCCTTTCATCATCTCTAGAACCTTTTCTGCATATGGCATAAAAGCCTGCTCTGCAGCAGCTGCTACAGAGCCAATTGCAGACATGCATGTCTCTTGTAGGTTCCGTGGACTACCCTGCAAAGACATAACTAATCTGCACATCAAGGGATCTAGATATGGTAGGATGTTTTCACCCATATCCTCACAGAATGCTGCCAGTGCATAATATGATTTCTCCTTTACTTCATCTGATGGGTCTTCAAGTGCATTTAAGATGCAAGGAAGGACACTCTCATAGTGAGATAAAATTTCTGGCTGCAAGTGTTCAGCAAATTGACCAAGTGCAAATGAGGCAGCACCTCTAACCATTTGCTCTTGGTCCTTTAAAGCTTCTAAAACAACTTTGAGACAGTCCTCTAGCTTATCTTTTAAATGCTCACAACATCCCTCTGAGACAACACCTAATGATGTTACAGCAGCCTCACGATACTTGGGATTAATATGACGAAAGCTCACAGAAGCAAACTCAAGAACTGGTGGGAAAACATGTCTCGGTAAATTGATAGCCATTGTATCAATGACTTCTGCAGCAGAACGATCTGCTGCTAGATCAGAATCTCCATCTTCATCAGCTGTTTCTGTAAGCAAGGGGCACATAACTTGTAGAATAGGTATTACCAGCTTATGTTTTTTCAAGAAAGATGCTTTAAATTTTACAAGCCATGAGATTATCTGTATAGCCTGTTGCCTAATATTTATTTCCAGTTCTTGGTTTGAGCAAACTTCAAGCGAAAATTGTACAATTGATCTCACAGAGTCCCCAAGAAGTGGGGCAGGGGATTCAATTAGTTCATCAAATATTTCAAAAGCGATGGAAGCAACATCTTCCTCTCCATTAGCAAGGCACTGCCTTGATACATTCAAGATACTAGGAACAAAATCCCGAAATATTTTTACAACATCACCCCCATCATTAACATACTCTATGAAAGATCCAACAGCCTTTAGGGCAGCAATTCTGACACGAGAGCTAGCCTCGTCTTGCAGGCATTTCAGTAAAATAGGTTGCAAATCATTCAGATGAGATTGAAAAGTAGTTCCGATAGTTTCAGTAAGGGAACTGAACAGTATCAAAGCTACTTCTCTATGATCTTCCTGTGGACTTTGGCTGCATTGGAAAATAAAAGGTAACAACTCAGGCCATTCTCCTGCAGGGACAGCGTACTTAGCTATAATACTCACAACATTTGCGCTAGCTCGTCTTACAAGATGGCTGTGGTCGATGGTGATGGAGTCGATGAGGGCTTGCTTGAGGGAGGCCTTGGCGTGCGGCGGAAGCTTCGGCCAGTGCGAGGTGATCTTCTTGCGGAGGAGCACCGCAGCGAGCTGCCGGACGTTGGGGGTCTTGGCGGTGCGGAGGTGGTGGACGAGCGCCGGCACCACCTGCGGGTCCCGCGCCAGCCGCCGGATCTGCTCCTCCGCCTGCCGCCGCGCGTCGTTGTCGGGCATCAGGAACTGGATCAACAGGAGCTCCAGCGACTGCGCCATCCCTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0206100.1 | 3 | 8547514 | A | G |
| Osa03LNT0206100.1 | 3 | 8547653 | C | T |
| Osa03LNT0206100.1 | 3 | 8547821 | G | A |
| Osa03LNT0206100.1 | 3 | 8547971 | A | G |
| Osa03LNT0206100.1 | 3 | 8548557 | C | T |
| Osa03LNT0206100.1 | 3 | 8548568 | G | A |
| Osa03LNT0206100.1 | 3 | 8548701 | A | G |
| Osa03LNT0206100.1 | 3 | 8549020 | A | G |
| Osa03LNT0206100.1 | 3 | 8550229 | G | A |
| Osa03LNT0206100.1 | 3 | 8551198 | G | A |
| Osa03LNT0206100.1 | 3 | 8551469 | C | T |
| Osa03LNT0206100.1 | 3 | 8551704 | A | T |
| Osa03LNT0206100.1 | 3 | 8552104 | T | A |
| Osa03LNT0206100.1 | 3 | 8552741 | A | G |
| Osa03LNT0206100.1 | 3 | 8554419 | C | T |
| Osa03LNT0206100.1 | 3 | 8554860 | A | G |
| Osa03LNT0206100.1 | 3 | 8555183 | T | A |
| Osa03LNT0206100.1 | 3 | 8555416 | G | A |
| Osa03LNT0206100.1 | 3 | 8555578 | G | A |
| Osa03LNT0206100.1 | 3 | 8548545 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0206100.1 | osa-miR5809 | Translation | 3.0 | 22.336 | 1 | 20 |
| Osa03LNT0206100.1 | osa-miR5830 | Cleavage | 4.0 | 12.626 | 1 | 24 |
| Osa03LNT0206100.1 | osa-miR159c | Translation | 3.5 | 10.409 | 1 | 21 |
| Osa03LNT0206100.1 | osa-miR159d | Translation | 3.5 | 10.409 | 1 | 21 |
| Osa03LNT0206100.1 | osa-miR159e | Translation | 3.5 | 10.409 | 1 | 21 |
| Osa03LNT0206100.1 | osa-miR167e-3p | Translation | 4.0 | 18.762 | 1 | 21 |
| Osa03LNT0206100.1 | osa-miR167i-3p | Translation | 4.0 | 18.762 | 1 | 21 |
| Osa03LNT0206100.1 | osa-miR169i-5p.2 | Translation | 3.5 | 16.713 | 1 | 22 |
| Osa03LNT0206100.1 | osa-miR169i-5p.2 | Cleavage | 4.0 | 11.801 | 1 | 22 |
| Osa03LNT0206100.1 | osa-miR816 | Cleavage | 4.5 | 17.351 | 1 | 20 |
| Osa03LNT0206100.1 | osa-miR816 | Cleavage | 5.0 | 13.071 | 1 | 20 |
| Osa03LNT0206100.1 | osa-miR1429-3p | Cleavage | 5.0 | 17.017 | 1 | 21 |
| Osa03LNT0206100.1 | osa-miR1866-5p | Cleavage | 3.5 | 11.99 | 1 | 24 |
| Osa03LNT0206100.1 | osa-miR1879 | Cleavage | 4.0 | 12.85 | 1 | 24 |
| Osa03LNT0206100.1 | osa-miR827 | Cleavage | 4.0 | 18.801 | 1 | 21 |
| Osa03LNT0206100.1 | osa-miR5148a | Translation | 4.5 | 8.02 | 1 | 24 |
| Osa03LNT0206100.1 | osa-miR5148b | Translation | 4.5 | 8.02 | 1 | 24 |
| Osa03LNT0206100.1 | osa-miR5148c | Translation | 4.5 | 8.02 | 1 | 24 |
| Osa03LNT0206100.1 | osa-miR5160 | Translation | 4.0 | 19.596 | 1 | 22 |
| Osa03LNT0206100.1 | osa-miR5338 | Cleavage | 5.0 | 19.641 | 1 | 21 |
| Osa03LNT0206100.1 | osa-miR5507 | Cleavage | 4.5 | 10.581 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0206100.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0206100.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0206100.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0206100.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0206100.1 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)