© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0206200.1
AGATCTGGACACCATAACGAACCACCAATAATATCTGCCTACGAAAGTAAGCATAAACATATAGAAGTATCCGATACAATACGACACAAATATTATGGTACACGGTTTCTAAGTTGGAAACAGGTGCAAAGTAAGCTTCACGAGATACAGACATACACTTAGGCATAGAGAGCTTTATTGATCTCTAGAACATCAAGCTTCAATTCATTCTGAGCGCTCCCTGGAGACAGACCTTGAGTAGGAACTGCGGCTGTGAGAGTAGCTCTCCCTAGAATGCCTCTTACCCGACGACCTGCTGCGCGACGGTTTCCTTTCACTGTATCTTTTCCTTGGAGAATAGCTCCCTGACCTCTGAGAATCCGGGGAACAGCTATGGGAGTAGCTCCTCTGAGGTGATACACTGCGAGAATAGCTCCGTCCTCTAGCACTTGGAGAATAGCACCTTCTATAGTATGGTGAAACAGAATGGTCATAGGAACATGACCTCTCTCTTCTGTAACGGTATGGAGATCTTGAACGGTAGCGGGAACCACGGTAAGATGAGTATGACCGACGCCGTGAACCACGTGTGTCATAGGGAGAGTATGATCGCCGTCTACCATAAGGAGAAGGGGATCTGCCATACGGAGAGTAGGACTGTCTCCTTTCATGTGGAGAGTAGGATCTACGCCTCTCATAGGGGGAGTATGATCTTCGCCTGTTGTATGGAGAATATGATCGCCTTCTACCATAAGGAGAATAAGACCGTTCTCGCTCAGGTGAGTAGCGTGAACTGTAGCGGTCTCTTTCAACAGGCGAGTAGCTTGGGGAATACCTCCGTGCTGGTGTCACACATGATGATTTTGTGCCTAGATACCTTCCGGGCGTTGGTGTTCGACCACGTCTTCTCTTGGCCTGTGGAAAGGATTCAAATAAGCCTTTTCGCCATATTAGCATTAAAGAGTGATGCAACAAATTGGGAATCTGAACGACATGATTAATATGGAGACTATATAATGTAGGGCATACAACCCTTTGGTTGAGGTAGCATGTTTGGCTGTTAGGTTGTAAATCTTTTGAATTTGACGTAGAGCAGCAACGGACATCTACCCTGCTGCTGTCAACAAAAGCTTCTCTACAGTTATCACACGACCTTCCAACACTGAGCGGTCTAGATATTTGATGCAAAGATCAGCCTCCTTAACAGTAGCCATGGTAACAAATCCAAATCCCCGGGATTCCCTTGTCCATGGATCAAGTACTATGCTAGCATCAATAACCTCTCCCTCAGCAGAAAAGTGTTTCTCCAGATCTCGATCTGTCACACGAGCAGATAAGCCAGTAACATACAGGTTGTTCCCAGGGTTTTCAACATCACTTGAGTCCACACTTCTAGAACGACTCCTATACCTTGAACGGCTGCTCCGTCTGGGCGATGTAGAATATGAGTCGGACTCATATCTTGATCCTCTGGAGTACGACATCTTCCTTCGTCGCGACGATCCGTGCCCTAGCCGAGAGCGTCTCTCTGTGCCGGCCTCTCTTGTTCTCAGTCACGGCGCTGCCTTTCTGCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0206200.1 | 3 | 8768107 | G | A |
| Osa03LNT0206200.1 | 3 | 8768196 | T | C |
| Osa03LNT0206200.1 | 3 | 8768248 | A | G |
| Osa03LNT0206200.1 | 3 | 8769488 | T | C |
| Osa03LNT0206200.1 | 3 | 8769541 | T | A |
| Osa03LNT0206200.1 | 3 | 8769558 | A | T |
| Osa03LNT0206200.1 | 3 | 8769595 | G | C |
| Osa03LNT0206200.1 | 3 | 8770365 | A | G |
| Osa03LNT0206200.1 | 3 | 8768330 | C | T |
| Osa03LNT0206200.1 | 3 | 8767790 | T | C |
| Osa03LNT0206200.1 | 3 | 8768175 | T | C |
| Osa03LNT0206200.1 | 3 | 8768259 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0206200.1 | osa-miR5793 | Cleavage | 3.5 | 23.342 | 1 | 21 |
| Osa03LNT0206200.1 | osa-miR5822 | Translation | 5.0 | 13.728 | 1 | 21 |
| Osa03LNT0206200.1 | osa-miR5079b | Cleavage | 3.0 | 15.983 | 1 | 22 |
| Osa03LNT0206200.1 | osa-miR156k | Cleavage | 3.5 | 19.017 | 1 | 21 |
| Osa03LNT0206200.1 | osa-miR1879 | Cleavage | 4.5 | 21.227 | 1 | 24 |
| Osa03LNT0206200.1 | osa-miR2864.2 | Cleavage | 4.5 | 15.847 | 1 | 21 |
| Osa03LNT0206200.1 | osa-miR2864.2 | Translation | 4.0 | 10.115 | 1 | 21 |
| Osa03LNT0206200.1 | osa-miR5079a | Cleavage | 3.0 | 15.983 | 1 | 22 |
| Osa03LNT0206200.1 | osa-miR5525 | Cleavage | 3.5 | 13.786 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0206200.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0206200.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0206200.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0206200.1 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Osa03LNT0206200.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)