© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0018300.1
GTCATTTTTTAAATAAGTTTTGGCGGCGGTTCATTTGTAAAATTAGTTTTTTCAAAGGGTCAAATTGTCAAAAATTGTGAAAATTTTGCCTTCCTGAATCCTGAAGAAGAAAGTAAAACAGACCTGTCCTTTTCTTGTTCTTTTTTTTTTAATAGAACAAGCAATAGGTGGTATTTATCTTATCTTCTTTCCCACCCTTTCTGCTGTCAATGTTCATAAATTAATCTCATTCCCACAAAATACATTTGAACCTAATTTTCATGGTTCGAAAGTAGGGATTTGAGCAGTAACTCCCCATGTTGCCTGATAAAACGTGCGCGCTGTGATGCTTCGGTAAGGATCTTGCTCTCTCTTCCTCTTCAGATAAGACATTATATTCTCCACCTCTGACTTGATGTCCAAATATAATTGGTTTGCACTCTCCCTATCCCTCTGTACACCGTCCATTCCTTTCATTTCAATTGGTTTTCCAAATAGATAGTATAGCCGACCTGGTAATTTAGGTAGAACAGCAGGCAAGTGTAAGACCTGATTTCCTTCCTCTCCTTTTACAGTACTCCTTACTCCTGGACAATCTTGGTTGAACGACTCTATTGTTTCTCTGATATAAGGGATGTTCTTTAGTTCATTGTAATCCAGAACTATCTCTAACATGTCATCTTCTCCTACACAACCGAATGGTATGACAGTAACTCCAAACTGTGCTGCCATTCTTACAAATTCTGGTTGATCTGGCCAAAACAACTGGTAGTCTTCATCCTTTCTATGTAGAGCTTCTCGAATACCACCAGGATAGAGGAGAACAAATTCATCTCTCTCAAATAACCTATATGTATTAATCGGACTGACTTGTACTCCCCCATACAATGGGACTACGTCAAAAAAAGATAGCTCCTGGCGCAAAATCTCATAATTCCCCACAAAAAACACTGGATGAGCCAAAGTTCGCAGAACTGCTTTCTTCTCCCTCAAGAACTCTTCAGCCATTGAAGTGATCTCCATTGCCAACAGCTGATGGTAACCCACCAACAGGACGGGGCCTTTGTCAGGAACACCGGCGAGGCCGCGGACGATTTTGCCGTTTCTCAGAGTAGATAGCATGACTGGGCTCAGCAAATGGTGAAGCAGCTTGAAATCTTCACCAAATGTTCTCTTGAATTCACTTATTGTAGGTGGGAGGAAATCAGTGATAGTGTCCCTTTGTTTGCCCTGGCGGTACATGCTGGCTCCTTTTATGACAGTTAGCAGATTAAAGCTGCTCTCCATGAGTAATCTATCGCTGGAAGTCCTGAAGTATCGAACTTTGCAACTTTTCAGTGCCTTAAACAGTCGATCTGCTTCTCCACTTGGAGGAAGATTGTCATTGCCACTGGCAAGAAGCAGAATTTCTGCTTGTACTGCATTAAGACGAGAGTTTGTATAGTCTACACCTGACATAAGAAGCTTGAGCTTCCACACAAGAGTATCCATTCGTACGATATGTCCAAATTCTGAAAGTAAAGGTAGCATTGAAGAAAGACTGTCTGAAAAACTTTCCAGAGTATCTTGAGGAGAGGTATTGTTCTGAATGCTAACCATTGCCATCTTAAGAGGATCACCAATCAAATATCTGAGAAGGTGAGGGAGAGTGACAGGAAGGTTGCTTGGCACCATTTCCAAAAGAGGCAATATTGCCTGCAACGGAGTTTTCGCAAATGATGTTGCTGGATTTACTAGTATAAGAACCAAATCAATTTCTGGATTTCGTGATGCCAAAGAAAGAGCCAAACATCCACCAAAGGAATCTCCAATGATATATATTGGTCTGTTTGGTGACAAATTGTGCTCATATTTGACAGATTCCTCCATAATTTGTAACAACCCTGTATGAATTTTACTTCAAAACATGTTAGTGAAGGGAACCTTGATTAGTGCTCGTATTTCCTTTCTTCATACCTGAATCAGAGAATACTAAATTTTACTGTGTTGATTTTAATCATTAATATGTTCCCTATTTAAAAAAAAAAGATGAACTGCAGATCTCTGACTTCAAGAAGAATGAGAACTTGCACCCACAAGACCATGACAATGACCACAAGCACCATGGAGTCCACACCATATATGGCATACCACTTGGCAACATTATGCTCTGCTCCCCTATTTAGGGTAAGTTATAGTTGTAGCAAGTACATATAGTCAAGTATACTTGTCAGGACATGGACATGTTAATCTGACGCTGATAACATATCTAAAACAAGACGTCTATTATTACCTTCATATGGTGTACGATCATTGACCGGTATATGCAAGCAGCGGACCTCAAATACCTTGCCCAAAGATTTGTGCTGCATGATAAGTTCCATTCCAACACCGTCGATTCCTGGCAAGAAGAGCAGCAGCGGCGGCGCGTGGACCGCCGGCGGGCCGCACTCGACGGGGCAGAACCACCGCGGGGGGCCGCCGCCGCCGCCGCCGTCGAGCGGCGTGGCCCTCAGCGCGTCGAAGTAGTCCCTGACGGTGGCCTCCCCGAAGCCGTCGTCGTAGAGGGCCTCCAGCCCCACCTCCTGCACCTTCTTCGCTCTCCTCCTCCTCCTCCTCATCCCCGTTCCACTCTTCCTGTCCGTGTCCTCTTGCCCCTTCTCCCCGCTCGCTGGCGCCTCCGTCGAGCTCGCTCGGAGGCGGGTGGGCCGCCGACGGGGAGTTGCGGCTGCGGGGGGGAGGACGGCGTGGAGCGCGATGGACATGGACATGGTTAGCAGCGTACTACGGGCATTTGGTGAGAGAAACAGGGTGAGTTGGAGAAGAACGAGAGGAAACAGGGGAGGAGGAACAGGGGAAGAGGAAGCAGAGCCACGTATATTGGGGGTGGATCGATGGAGAGGGGAGCGTGATTTGAATTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0018300.1 | 1 | 14733376 | T | C |
| Osa01LNT0018300.1 | 1 | 14733649 | T | C |
| Osa01LNT0018300.1 | 1 | 14734198 | A | G |
| Osa01LNT0018300.1 | 1 | 14735770 | C | T |
| Osa01LNT0018300.1 | 1 | 14736085 | C | T |
| Osa01LNT0018300.1 | 1 | 14736235 | A | G |
| Osa01LNT0018300.1 | 1 | 14736308 | A | C |
| Osa01LNT0018300.1 | 1 | 14736466 | G | A |
| Osa01LNT0018300.1 | 1 | 14736835 | A | G |
| Osa01LNT0018300.1 | 1 | 14732445 | T | C |
| Osa01LNT0018300.1 | 1 | 14736836 | T | C |
| Osa01LNT0018300.1 | 1 | 14736845 | A | G |
| Osa01LNT0018300.1 | 1 | 14736999 | T | C |
| Osa01LNT0018300.1 | 1 | 14737207 | A | G |
| Osa01LNT0018300.1 | 1 | 14737415 | T | A |
| Osa01LNT0018300.1 | 1 | 14737500 | T | G |
| Osa01LNT0018300.1 | 1 | 14737543 | G | A |
| Osa01LNT0018300.1 | 1 | 14737790 | A | G |
| Osa01LNT0018300.1 | 1 | 14737824 | A | G |
| Osa01LNT0018300.1 | 1 | 14731985 | C | G |
| Osa01LNT0018300.1 | 1 | 14732474 | T | C |
| Osa01LNT0018300.1 | 1 | 14732489 | C | T |
| Osa01LNT0018300.1 | 1 | 14732615 | A | C |
| Osa01LNT0018300.1 | 1 | 14732814 | A | G |
| Osa01LNT0018300.1 | 1 | 14732983 | T | C |
| Osa01LNT0018300.1 | 1 | 14732976 | T | C |
| Osa01LNT0018300.1 | 1 | 14732467 | T | C |
| Osa01LNT0018300.1 | 1 | 14733358 | T | G |
| Osa01LNT0018300.1 | 1 | 14732676 | T | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa01LNT0018300.1 | DTM_#DNAt_MULE_japo_Os0085 | Chr1 | - | 14731550 | 14731894 | 78 |
| Osa01LNT0018300.1 | DTM_#DNAt_MULE_japo_Os2714 | Chr1 | - | 14732440 | 14733369 | 929 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0018300.1 | osa-miR156b-3p | Translation | 4.0 | 11.484 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR156j-3p | Cleavage | 4.5 | 11.675 | 1 | 22 |
| Osa01LNT0018300.1 | osa-miR397a | Translation | 4.0 | 23.103 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR397b | Translation | 4.5 | 23.103 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR166i-3p | Translation | 5.0 | 11.675 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR528-5p | Translation | 4.5 | 2.961 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR815a | Translation | 4.5 | 10.69 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR815b | Translation | 4.5 | 10.69 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR815c | Translation | 4.5 | 10.69 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR818a | Cleavage | 3.5 | 16.112 | 1 | 22 |
| Osa01LNT0018300.1 | osa-miR818b | Cleavage | 3.5 | 16.112 | 1 | 22 |
| Osa01LNT0018300.1 | osa-miR818c | Cleavage | 3.5 | 16.112 | 1 | 22 |
| Osa01LNT0018300.1 | osa-miR818d | Cleavage | 3.5 | 16.112 | 1 | 22 |
| Osa01LNT0018300.1 | osa-miR818e | Cleavage | 3.5 | 16.112 | 1 | 22 |
| Osa01LNT0018300.1 | osa-miR1440a | Translation | 5.0 | 24.444 | 1 | 20 |
| Osa01LNT0018300.1 | osa-miR1858a | Translation | 4.0 | 13.229 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR1858b | Translation | 4.0 | 13.229 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR1861n | Translation | 4.0 | 7.966 | 1 | 22 |
| Osa01LNT0018300.1 | osa-miR5146 | Cleavage | 5.0 | 12.03 | 1 | 24 |
| Osa01LNT0018300.1 | osa-miR5517 | Cleavage | 3.5 | 15.361 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR2275d | Cleavage | 4.0 | 7.626 | 1 | 22 |
| Osa01LNT0018300.1 | osa-miR6251 | Translation | 5.0 | 12.124 | 1 | 21 |
| Osa01LNT0018300.1 | osa-miR2095-3p | Cleavage | 3.5 | 12.38 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0018300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0018300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0018300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0018300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0018300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0018300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0018300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)