© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0206800.2
GGGCAAGTTACACTGGATTTTTCGCTACTTCTCCCTAATCGGAGCACGTTCTCAGACATGACATATCTTACACGCCCTCGTTTGGGCCAACGAATATATGTACAGGATGAAAGAATATTGTACAGGTGAGCGGTCAGTGCCGCTGGTATTGCAACGGGACGAGCCTAGCGTTAACGGCTTCAATGTATGTGCGCAGGCGGCGTCGATCATCTCTTGTTAGGGACAGAGCGGGGTTCAGGGCGAGTGACGGTGCCTCAGTCAGGAGAAAGCGCAGCATGGATACTGCCTTCGAGTACAGCACCATGGCAGATGCTGATTTCCCCATCATCTCATCAACACCACCATGTCTTCCCAGGTTAAGCGCGGTCTGAAATATGATTTCTATCGCATCTGGCATTTCTGTAGCATCAACTGTCTGTCCTATAGTGTTGGCAAGTTCTTCAGCATATTCCATTTGAACCAAAAACTGACTCTCTATCTCCATGCATGTATCATATAACAGTTGAGAGTTTGCAAGCAAATGGGGAGCATTTGAGCCAAAACCCTTCGCGGTGACATCATGGGAAGGATTCTCTCTTGTGGCAGAAGATGCATAAGAAGTGCAGATGTAAATTGCTTGCTTCCAGGTTGCAAGAACAACTAGCTGAATCGAGAATCCCTCTAAGTGCTTGGCATCTTTAATCTTTTCTTTCACCAATTCTGCTATGGTAGACGCATACTGCTCCAATAATCTAACCCTGGTCAGACAATCAGATGGTGGTTGATCCATAGCATCGTTGAGATCTGCAGATCCTTGTGAAGTACCAGATACTGGAGAGCAGTGACTGTCCAAGCTACCAGTTCCACCAGATTGCTGTCTGTTAATTGCCATGCCATGTATTGGCCTTGGTGCACTCACAGCAGTTAATAACTTCGGTGGTGAAAGAGAAGAACTGTCAAGTTTTGATGGCATGGTGCGCTGTCGGGAGTCATTCATCGAAGAGGAGGATCCCTCTGGGTGCACAAAGACATATTCCTGATCTTCTGGATAACCACCTTTAGGGTTGTGCCCTTCATCACCCTTGTTTTCCTTGATTCTCCTAGGATGGTCCAGGCGTTGACTACTAGATGCGTAATTATTTCCCCTAATATATTTAGAGACCAGACTTGAATGTTTCGTTGGACTCTGACCTGAAGTTTTATCAAGCCTTTTACTCGTGGCAAACCCATAGGATTTTATTGCACTCTTACTATCAGAAACAGGACCTTCATCCTGTCCAGTTGACTCATCATCCAAAGGAAAAGGCATACAATCTTCCTGAGAACTTTGGCTTGAAGGTCTCGTAGGACTGCTATTAATGAATGGAAAGCCATCTCTTATGTCCGATGGTGTCCGGCTCAAGGTTCTCTCCAAAGCATGTTCAGCGAGAAATGGATGGTTCACAAACTCTTCAACGGTAAGGCGTTCCACTGAATTGATTCGCAGTAACTTTCTGCATAAGTCAATGCAGCCATGGCTCAAGTCGCAATCAGATGGAAATCGTATTTCTCGTGTATTGAGTATATTTCTCAGCAACTGGATTTGACTATCCCCGGTAAAAGGAGGAGATCCGGTAACAAGTTGATATAGAATTATACCAACACTCCACAAATCTGCCTTTGCATCATACTTCTGAGCTTGCATGACTTCTGGAGCCATGTAAAGCGGTGAACCGCAAAGTGTTTCAGCCAGAGAAGAAGGTTCTAAAAACTTTGCAAATCCAAAGTCCGCAATCTTCAAGAGGGAATTTTCATTATTTGCAACTAGAAGAATGTTCTGTGGTTTTAGATCTCGATGAACCACGTTGTTTTCACGCAGCATCTGCAGACCAGATGCTGCATAAAGAAGAGAATGTGATTTTGGCTCTGGGGAGAGATAAAGCAATAAATAGTGCAAGACACTGAGGGTCTGAGAAAGTGCTTGCCTAGCTGCTGGATGAAATGCTTAGCAACTGTTTCAGAAACCCTTTTATGCTGCTGAAGGTATGAGTGTAAGTCACCACCTCGACAGTACTCTAATACAAGATATATTTTCCCACCATCCTAAAATCATCAAATAACAAAGAGATACGCAAATAATAGTTAGATATGAGAGTGAAGAAATAATTATGTCCAACAATCTCCCTAGAGGGAAGCTTCCCTTTCGTGGAACACCTAGAAATATTAATATCGGAGGCATAATTAAACATGTTAGGTATGCTTTTGAACTCTAAGGAGGGAACAACTAATGGTATAGTTTCCTAAATTCCACCAGAAAATATATCCAAAACAAACAAGTTACCAAATTTGGAATTTTAATGTTTTGCTTCCACAGCCAGCGAACAAACATCCAAAGTTAAACAACTTACGCTATGGTACTAGCATTAAGTTAAAACTTTGCATAGTATCACCACCCAAATGAACGTCAAGCCCAATGAGTTCTCCTTTGCTTGAGGCATCTGAATACCAAGAAAGCTCAGAAGAATTCAACTAAAAGAGAGACTATAAGAACTCCCGATTTTATTCATCCGAGGTTTATAAACAGTCGCCGTCCGCATGAAATCCTAACAAATCGAACGCAATTGCGCAAAATATAAACAGTAGAAGGGCGTTGATCCGAGGATCGGGGTACCCTGATGGACTCGTGGAGGGCGATGACGTTGGGATGACGGATGCGCCGGAGGATGTCGACCTCGGAGAGGAGGCTCTCGCGGAGCTTGCTGCTAAGCCGCTCCACGGCGATCTCCTTCAAGGCCACCTCCGTGCCCCGCGTGCGGTGCTTCCCGAGCCAGACCCGCGCGTACGCCCCCGACCCGATCTGCCGCACCAGCACGTAGTCCCCTACCCTCCGCACGCCGCTTCCTCCCCCTCCCCCGCCGCCGCTCCCCGCGGCGCGGTCCCCCATCCCCTCTGGTCCCGCTGCCTGGAGCGCAGTTCGCCGCGAAGGACGTGAGCTCCGCCGCCGCCGGGAGAGATGCCGCCGCGGCCGCGGGGAGAAGCAACCGAATTATCTCGCCGCGCGGAACA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0206800.2 | 3 | 8898317 | C | T |
| Osa03LNT0206800.2 | 3 | 8896685 | C | G |
| Osa03LNT0206800.2 | 3 | 8898210 | C | G |
| Osa03LNT0206800.2 | 3 | 8899028 | A | C |
| Osa03LNT0206800.2 | 3 | 8899272 | C | T |
| Osa03LNT0206800.2 | 3 | 8900561 | A | T |
| Osa03LNT0206800.2 | 3 | 8900887 | G | A |
| Osa03LNT0206800.2 | 3 | 8898674 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0206800.2 | osa-miR5541 | Translation | 5.0 | 12.851 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR6252 | Translation | 4.5 | 18.194 | 1 | 23 |
| Osa03LNT0206800.2 | osa-miR7694-3p | Cleavage | 5.0 | 20.298 | 1 | 22 |
| Osa03LNT0206800.2 | osa-miR395t | Cleavage | 5.0 | 12.971 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR395a | Cleavage | 5.0 | 12.971 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR399i | Translation | 5.0 | 19.466 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR171i-5p | Translation | 4.0 | 16.163 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR416 | Translation | 4.5 | 21.416 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR530-3p | Cleavage | 5.0 | 10.885 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR1849 | Translation | 4.5 | 15.755 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR1854-5p | Translation | 4.0 | 22.95 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR1868 | Cleavage | 4.0 | 21.27 | 1 | 24 |
| Osa03LNT0206800.2 | osa-miR812f | Translation | 4.0 | 10.386 | 1 | 24 |
| Osa03LNT0206800.2 | osa-miR1873 | Translation | 5.0 | 19.674 | 1 | 24 |
| Osa03LNT0206800.2 | osa-miR2873a | Translation | 5.0 | 12.095 | 1 | 24 |
| Osa03LNT0206800.2 | osa-miR2879 | Translation | 4.5 | 14.854 | 1 | 24 |
| Osa03LNT0206800.2 | osa-miR5144-3p | Cleavage | 5.0 | 20.471 | 1 | 21 |
| Osa03LNT0206800.2 | osa-miR2873a | Cleavage | 5.0 | 16.204 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0206800.2 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0206800.2 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0206800.2 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0206800.2 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0206800.2 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)