© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0018400.1
GTATTTAATGAGGGTACCATGTATTCTGTCACATCTCCTTGGTTTATATCAGATTTACAAGAACAACAAAGATAACAATGCCTAAAAGTACACCCAATAGCAAAATGACTCCCGATTCATACCATCACATATCCAAACTTAAAGATTATGTATGGCCTACTCAATGAATTTTGTGACACGAAACTAAAATAAATTGTTTGTTCCATGTTTGAATCTAGATCTTTTGAGGTGTGCATCCATCCATGCATGCACATTTCAGCTAGCTCTGCTCAAGGATCAAACGATGGGATTTCAGAGTCGTGGCCGCAACCAAGCTGGTACAGAATCCTGGGGAGGATGCTCCTGAACTTGTCCTCCTCCCTCTTCTCCAGCAGGTAGGCGATCATGGCCTTGACCTCCGACTTGACGTGCAGGTAGAGCTCGCCGGCGGCCTGCTTGTCCGTCATCACGGCCTGCATCCCCTTCGTCGGGATCGGCTTCCCGAACCGGTAGTAGAACCTGCCCGGGATCTTCAGATACACCCCCGGGAAGAACACCTCGTGGTCGATGTCCCTTAGCTTGAGATGGTTGCTGTATGCTTGCATGATCTCCTTGCCGAAGGGTGCGTTCCTAATGTCCTCGAAAGTGCAGAGCAGTTCCATTAGGTCGTCCTCTCCGACGACTCCGAAGGGCACAATGGTGGCGTTGAACTGCGCTGCCATCCTCACAAATTCAGTCTGGTCTGGCCAGAACAGTCTGTGCTCTTCACCCTTGCAGTGGAGTGCCTCGCGGTGGCCGCCGGGGTAGAGGAGGACGAACTCGCCGGCGGCGAGCAGCTGGTAGATGTACTTGTAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0018400.1 | 1 | 14744533 | T | C |
| Osa01LNT0018400.1 | 1 | 14743103 | A | C |
| Osa01LNT0018400.1 | 1 | 14743562 | A | G |
| Osa01LNT0018400.1 | 1 | 14743726 | G | T |
| Osa01LNT0018400.1 | 1 | 14743760 | T | A |
| Osa01LNT0018400.1 | 1 | 14744138 | T | C |
| Osa01LNT0018400.1 | 1 | 14744690 | A | G |
| Osa01LNT0018400.1 | 1 | 14744776 | C | T |
| Osa01LNT0018400.1 | 1 | 14744153 | A | G |
| Osa01LNT0018400.1 | 1 | 14744167 | C | T |
| Osa01LNT0018400.1 | 1 | 14744614 | T | C |
| Osa01LNT0018400.1 | 1 | 14744165 | C | T |
| Osa01LNT0018400.1 | 1 | 14744170 | G | A |
| Osa01LNT0018400.1 | 1 | 14744185 | A | T |
| Osa01LNT0018400.1 | 1 | 14744506 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa01LNT0018400.1 | DTM_#DNAt_MULE_japo_Os0218 | Chr1 | - | 14744152 | 14744543 | 391 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0018400.1 | osa-miR444a-3p.2 | Cleavage | 5.0 | 17.414 | 1 | 21 |
| Osa01LNT0018400.1 | osa-miR444b.2 | Cleavage | 4.5 | 17.414 | 1 | 21 |
| Osa01LNT0018400.1 | osa-miR444c.2 | Cleavage | 4.5 | 17.414 | 1 | 21 |
| Osa01LNT0018400.1 | osa-miR444d.2 | Cleavage | 5.0 | 17.414 | 1 | 21 |
| Osa01LNT0018400.1 | osa-miR444e | Cleavage | 5.0 | 17.414 | 1 | 21 |
| Osa01LNT0018400.1 | osa-miR1874-3p | Translation | 5.0 | 24.989 | 1 | 24 |
| Osa01LNT0018400.1 | osa-miR2868 | Cleavage | 3.5 | 14.481 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0018400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0018400.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0018400.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0018400.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0018400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0018400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0018400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)