© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0207300.1
GGCATCACAAAAAATGTGTAATTAGCTCTTGGACACTCGAGGCCTTATTTTATTGTTTCCTGTGGATTTGGATAGAGAAACACTGGTGAGAGTACGATTTTGCCCCTGCCCTCATATCCAGCAAGTGATTCTTGCACGGCTCGCCGGCGATGTGGCGCCACCGCCGCCGCCGTGATCTGCAGATCGCGTACACCCACCCGACGAGCTTCTCCATCCTGCGACGCACACCCAGGACGTCGGCGGGCCATGAGTCCATGCCGCCACGGCCGGCGACGTCGGCGTTGTGCCTTTGCAGGATCTCCCTCGTATGCAACCTGCAGCGGCAGAAGCGCATCTGCGTGCGTGTGATCCGGACAACATTCCATCCTGCAGAAGCCGTCGCGTAACCCCACCCCCCTCCACCGGCCATTGCTATTGTTTGCCTTCTACGTTCACTGACCCCGTACGCATGGTTCACCAACTGGAAAAGAAAAAAGAAAGAATACAAAGCTCTGCAGACAAGATGAGAGGAATGAGAGATTGCAATGGAGAAGAGGACGAGAATTGGTGCCTGTTTTTTTGGTTGATTTGAATCGAGATGAATCGATTTGAACCATACATATACAAAATTGGAAATTTGATTAAGAAGAGAAGGAGAAGAATCGAATCTCTTCCCGGACATGGCGCGCACCAGCGCACACACCGCCGCGGCGCCACCCCCGGCGTCCGCGATCACCGCGTCGTGCCCGCCCTCCGTCCGGCACAGCCGCTCCACCGCGGCCAGCGCGCTCCGGCTCCCCTACGCCGCCTCCCTCCGCGACGCGACGCGCGAACGCCGCCGCGGCTCCGGCGGCGACAGCGCGGGGGTGGTTCTCCTTAGCAAGGCAGAGCATGAAAATGCCACGGATCCCGATGCGGATGGCGCGGGCGTGGGCCTTCTCCTCGAGAAGCGTAACGAGGCCCTCCTGCCCCTCCATGACCCCCTCTGCCGCGCCCAGCACCGCCCTAGCATCTGCCCCGGACACCACCGCCGCGGCTTAACGCCAGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0207300.1 | 3 | 9347645 | T | C |
| Osa03LNT0207300.1 | 3 | 9347672 | T | C |
| Osa03LNT0207300.1 | 3 | 9346956 | T | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa03LNT0207300.1 | DTM_#DNAt_MULE_japo_Os0205 | Chr3 | . | 9346716 | 9348025 | 1027 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0207300.1 | osa-miR166a-5p | Cleavage | 2.5 | 23.832 | 1 | 21 |
| Osa03LNT0207300.1 | osa-miR166b-5p | Cleavage | 3.0 | 23.832 | 1 | 21 |
| Osa03LNT0207300.1 | osa-miR166d-5p | Cleavage | 3.0 | 23.832 | 1 | 21 |
| Osa03LNT0207300.1 | osa-miR166e-5p | Cleavage | 2.5 | 23.832 | 1 | 21 |
| Osa03LNT0207300.1 | osa-miR166l-5p | Cleavage | 4.0 | 23.832 | 1 | 21 |
| Osa03LNT0207300.1 | osa-miR166h-5p | Translation | 4.0 | 23.832 | 1 | 21 |
| Osa03LNT0207300.1 | osa-miR1846d-3p | Translation | 4.5 | 15.427 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0207300.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0207300.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0207300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207300.1 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Osa03LNT0207300.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0207300.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)