© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0207500.1
GCAAAGGCCACTGCGAAAACATGTTCACCAAAGGAAGAAGTCAAGCAGATGACAGCAATGCTTGAGGGCAAAAAACTGCAACGCAGAATAAACCTCAAGCCTCAATTACAACAGAAGGAGCAAATTGAAATTTCCACATCTATCACCTAGGAGCTTTCCACATTGCAAACCCAAAAAAAAAAAAAGTAAACCTATTTTGCTTTATGTAATTGAATCTGGGCAAAGAATCTAAACGATTATTTCAATTCCAGTTAACCTAATGCCATCTAAATGATGACTACACCGTACCATTTCCAAAATACTGAACTGATGCCATTGACATTGCCTGACAAACATGACCATCGAGCCAGCCATCAAAATTTGCCTCTTATAAGGTTATGAAATTTGTTATTCAACACCTCCAATCAAGTAGGCCAACACTTGGATGATACTCAAATAATCAATAAACTGAGAAATCCTTATTGATGAGCAACAAGATGGATGGATCCTTCTGTTGAAAACTGAGTGCAACAGTTGAAAACTGAACGGCAGGGCAGAAACATGAGCATAATAGATGGATCTTCCCAGCACAGTTACATGATCATGACATACCTAGTTGGGATACTAAAGGAGTTTGATGGCTATTTTTAATGAAAATGAAGATCCACTGCAATGCTAACATCACACAGAATAAGAAGGCAATGGATGGAGGGCCAAGAAATGAAGTCCAAAGCCTACATATGCTGTTAAGACTTGAATAACTATCAAATATCAATAGCAAATTTTAAATCAGAATTTGCACCTCGATGCTTCTTCAAACTGACGATCAGCTGGCTAGAAGATAGAATAATCATATGACGGTGCAGATTTTGCAAGGAGGAAATCAACTTTAAAATGAAAGTGACCCCTCCAGCCGCTGTCATATGAATCACTAACGGGTAGAAGAATATTGCTAAGCCCAAAATCAACAATAGCAGAATGATAAATAACAAAAAAAGCACCAGCCACCTCATTGAGGATGGCTGAGCCTTATAACCCTTGTACAGAGAGGAACAATGTCCAAATAACCATGCAACAATGCCGTTGAAGATGATGTATGTTAAAGGAGTCAGAAGATACGAGCACCTCATACATCTTCAGTAACTTCTGTATGTGGAGCAACTCGAGCAGGCCTTCACTCCGCAGAAAAAGGAACATAAGTGGCAACCAAGTAATATTCATAACAGTGTTCACCAGCATCCACTTAACTCTAGTTCTATGTAGACACATAAAACCGTACAATTCAGTAAACCAAGACCCGACAAACAAAGGTTTTGTTGTTGCCACTGAACATGGTAGCACAAATAGCAGGAACAAGCAGATAAACATCCTTCAGATTTCATGTTGAAATATCAACACCGTGAAGATCTAGTTGGTCTGCATCGCATCTGCATGGTATTTCTCCAAGTCAGCATCAAGTTCTTCAGCAGACTTTGGCTGGCTACGCTCTTTGCCACGGCGACCACCGGATCCACCAGGACCACCACTGCCTCCTCCGCCACCACGGCGCCTCCCACCCCCCCTTGGACGAGGTCTACCCTGCGGTAGTCCAGCTGGGCCACCCCTTGGTGCACTCTTAGCAACATTTCTAACGTAGCCTCCGTTATTTGCTGGAAGAGCAGCTGCAGCTGTAGGAGTATTGGTCCCAAGAATCTCTATTTTCATTGGCTTACCATCAAGTTGCACATTGTTATATTTCTTCACTGCTGCGACAGCATCGCCACGCCTTGCAAATACAACTTCAGCTGTTCCCTTAGACCTCCCACTTCTGTCATAGTGAATTACGTATTTCTTAAGATCACCTAATTCAGAGAAAAGCTCCTTGATATCCTCGGTCGAGACGCCGAAGTCCAAATTGGAGATGTAGAGCTTGGTGCCAGTCTCGATAGCCGAGACCCTCCCGCCTCCGCCGCTGCCGCCGCCGCCGCCTGCCGCGACATCCGAGTACATGTCGTGCTGCCACGCCGATTCAGGGGCCTGGATCGCGTCATACCACAGTGAGAAAACCACCCGACCATCCATCCACATCCTTCCCCGCCTCGCCGTCGAAAAGCGGAAGCCCAGCTCCTCCGCCGACGGCGCGCAGCAAACCCTAGCCCCACGTTCGATCCGTTGCTGTTCGTACCTTGGGCGGCTGGTAGGGCCCCGCCCTGTTCCCCGACCTCTTGAAGGGCCGCCTCGTCGGCCCCACGCCGCCGCCGCCGCCACCACCAACACCCCCACCCCCGCCGCCGCCGCCGCCAGCGGCAGATCCGCGGCGGCCGCGGCCGGACGAGGGGTTGGCCTTCTTGTTGTTCTTGATGATGTCGTCGAGCGTCATGTCGAGGGTCTCCGCCATGGCGGCTGCTCGGGGGCGGGTAGATCTGGCGCGCTAGGGTTGGGCGAGCGAGCGAGCTCGACGACGAACGAAGAGGCGGCGGATTCGGGATTTGGGGGGTGGAGGCGAGAGCGGCGTTAGGGTTGGGGAATTGGGAGATTTTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0207500.1 | 3 | 9450578 | T | C |
| Osa03LNT0207500.1 | 3 | 9450943 | C | G |
| Osa03LNT0207500.1 | 3 | 9451319 | A | C |
| Osa03LNT0207500.1 | 3 | 9452623 | T | C |
| Osa03LNT0207500.1 | 3 | 9452785 | A | G |
| Osa03LNT0207500.1 | 3 | 9451672 | G | T |
| Osa03LNT0207500.1 | 3 | 9449651 | A | C |
| Osa03LNT0207500.1 | 3 | 9449684 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0207500.1 | osa-miR5816 | Translation | 4.5 | 14.798 | 1 | 24 |
| Osa03LNT0207500.1 | osa-miR5143b | Cleavage | 5.0 | 10.654 | 1 | 24 |
| Osa03LNT0207500.1 | osa-miR166k-5p | Translation | 5.0 | 11.302 | 1 | 21 |
| Osa03LNT0207500.1 | osa-miR166k-5p | Cleavage | 4.5 | 23.19 | 1 | 21 |
| Osa03LNT0207500.1 | osa-miR1847.1 | Translation | 4.5 | 18.892 | 1 | 21 |
| Osa03LNT0207500.1 | osa-miR5143a | Cleavage | 5.0 | 10.654 | 1 | 24 |
| Osa03LNT0207500.1 | osa-miR5534a | Translation | 4.0 | 19.653 | 1 | 21 |
| Osa03LNT0207500.1 | osa-miR5534b | Translation | 4.0 | 19.653 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0207500.1 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Osa03LNT0207500.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0207500.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0207500.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0207500.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0207500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)