© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0207600.1
GAGCAGGCAAACATGCTGTCTCTCCAGCACATTCACAAATAACAATCTTAGTTACAATGAATAAATGCGGTCTGTGTCGCTGCCTGATTATGAGTTCTATAGAGTACCTAAGTTCGCTGCATAGTCATGTTCGCAAACATTCTCTCAACAAAGAACGAGAGCCTTTGGAACTCGAGAAAAAATAATGTTTGTGCTACATCAGGTGTTGGTTCCTCGTGACATAACTAGAAATCTAAAACACTGATGACTAGCATCTAATCTTCCTTCTGCTTTCCTGATTGTTTTCTGGCACGGGCTGTCAAGCACCGCCCCACAAATTTAAGGACCTCGTCGATGAGAACCACTGGGAAAGCAACTGCTATCACCAAAAGCCATTCATTGAAGCTTAGGGGCACAATACCAAAGACTTGGGCAAGGAATGGCACGTAGAGGATCAAGAAATGCAGCCCGAATGAAACCGACATTGCCAGAAGAAGCCAAGGGTTAACCCACGGAGGCATGCTCAGAAGGCTACCATCCTCCGACAGCGCATTCAGCGAGTTGAACATCTCAATGGCCACCAAGACAGACAGGGAGAGGGTTGTCGCTTTAATTTTGCCGCCCTGGAAGTAATCACATGGGTTCACATCGAAGTTGAATGTACGGGCACCTGCTGTGAATGGTGACACCTTGAAACCCTCCCATGAGGAGCACTGGCCCCAGTTTGAGAGCTGGGAGTACGAGACAAGAGAGTGACCATCACCAGCCAGGTCAATTCCCAGGAAAGAGCCATGTGTGTACCAAATGATAAACACTCCCACTGTGGCAATCCCAACGTACATCCCAATGACCATATAACGGAATAGGATCCATGGAGTGATCAACGAGTCATCACTCCTTCGTGGAGGTTTCTTCATGATATCTTTATCAGGTGGGTTGAACCCCAAAGCCGTTGCAGGAGGACCATCTGTAACAAGATTGACCCACAGAAGTTGCACAGGGATGAGACCTTCAGGAATACCTAAAGCTGACGTTAGAAATATGGAAGCAACTTCCCCGATGTTTGAAGAGATCATATATCTTATAAATGCCTTCATATTGTCGTAGATTGACCTCCCTTCACCAACAGCTGCGACTATTGTACTGAAGTTATCATCTGCAAGAACCATATCTGAAGCTTCTTTTGCAACCTCAGTCCCTGTAATGCCCATAGCAACTCCAATGTCAGCCAACTTCAGAGCTGGTGCATCATTCACTCCATCACCAGTCATAGCAACCACTTCACCATCTTCTTTGAGCAATCTAACTATCTCCTGCTTATGTTTCGGCTCAGCCCTAGAGAAGAGAAGGCCACCTGTTTGCCTTAAGAGTTTCTTCTTATCTGAAAGAGACATGAATTCCTTCCCTGTGAAGCTCTTTGAACTAATATCTTCCGTGGAACCAAAAACTCCAATCTCACGGCATATCGCCTCTGCTGTTTCTTTGTTATCACCAGTAATCACCATAACACGTATTCCAGCAGCTCTACAGTCTTCAATTGCTTTGTGGACTTCTTCTCGGGGAGGATCCCTTAGACCAACAAAACCACAGAATATCAAATTACTCTCTATGGAAGAGTAGTATGAAGGATCAAGTAGATATTTGTGAGCTGCATGCTCTTCACCATCATATGTTGCAAATTCCGCCAAATCCTCCTTGTACGCAAAACCCAAACATCGCAATGCACTAGCAGACATTTCACGAAGTGTTGATAATATGAGCGCCTTGGCACCTTCATCCAGGAGCACAACAGATCCATCAAGCAACTGAATATAGCCACTCCTTTCTAGCAAATTTTCTACAGCTCCCTTGACAAGCAGCAAATTCTTTCCAGAGTCTGCTTTTTTTACAATAACTCCCATTGATTTTCTAGTCCGATCGAACTCCAGAGTAGCTACTCTCTTAGCAGCATTGTTCCACCATTGACAGCACCTTAGCAAATCAGATGAATCCAGGGATGGAGTATATCCACCAGGAAGGCCCATTTTCTCAACCAAAACCTTCAAAGCAGCCTCTGTGGGCATCCCAGTGGCAACATACTGATGCTCAGAGTGAGCAATACTTGCATCATTGCAAACTGCAGCAATCTTAGCAATCATCTGGAGATTTTCATCCATGCTCAAACTTGGCCACTCGTTTATCTTCCCGTCACTTGGATCATAAGTGGTTCCATCAACCTTAAAGCTCCTAAGTGTATCAGGCCACCTCCCAATTGCCACAAGCTTCACCGCTGACATCTGGTTGGTGGTCAATGTTCCTGTCTTATCGGAGCAAATCACTGTAGTGCAACCCAGTGTCTCAACACTTGGCAACTTCCTCACAAGTGCATTCTTTTGTGCCATCTTCCTGGTGCCGAGCGCCAAGCATGTGGTGATAACAGCAGGCAGGCCCTCTGGAATTGCTGCAACAGCCAGTGCCACTGCAATCTCAAAGTAATACGTGCACTTCTCAAATGAGAACTTAAAATTCCTGGGCCACCCATCCACATACTCCCAGGTGAGGAAATACTTAACGTTGATAAGCCAAACCAAGGCACAGATCACCCCAATTATGGCTGTCAGTGCCTCCCCAAACTCATTGAGCTTCTTTTTCAGTGGCGTGTCATCTTCCTCTTGTGAGGCTTCCTGGATCTGGGCATGGATCTTGCCTATTTCAGTGTCCATTCCAGTGCCCGTCACAACACAGACAGCGCTGCCGTTGACAATTGTAGTGCCAGCAAAAACCATACACTCCTTTCCCTGGATGTCTGTGTCCTCCAGCTCGATTTTATGGCTGGTCTTGTTAACCGAAGCAGTCTCACCAGTGAGGGAACCCTGCTCGACACGGAGGGTGGAGCTGATAAGCTGGAGCACACGCATGTCTGCCGGGACCTTGTCGCCAACACGGAGCTCCACGATGTCTCCGGGGACGAGGTCGCGCGCCGGAAGCCCATGGGACCACCGGCCGTCGCGCTTGACGGTTGCGTGCTCGGACTGGATCTCCTTCAGCGCCTCGAGCGCCTTCTCGGCGTTGCTCTCCTGCCAGACTCCGACGACGGCGTTCACTATCAGGATGAGGAAGATGACGAGGGGCTCCACGAAGGCGGTCGCCCCGACCTCGCCGCCCTCCGCACCGTCGTAGAGCGCGAGCACGAACGACACCACGGCGGCGGCGAGGAGGATGCGCACGAGCGTGTCGTCGAACTGCTCGAGCACCAGCTTCCACACCGACGGCGCCGCGTGCCGCTCCAGCTCGTTGGGCCCGTACCGCCGCAGCCGCGCCGCCGCCTCCTCGGAGGACAGCCCGCGGTCCGCCGCGACGCCCAGCTCCGCGAGGCACTCGCTCGGCGTGCGCGCCCACGCCGGGAAGGCCGCTGCGGCCGGCTCCGACCCGGATGCGTCGGATCCGTCCCGCCGCTTGCCCTCCTCCTGCCCGCCCTTGCCCATTGGTTCACGAACCTCAGATTCAAACTCAACAAGAGGAGAGCCTCCTACCTAGGGTTCCCTTCCGCCGCCGCGGCGAGATCGCATGGAACCGAAACCCTAGAGGCGGATGGTGGCGGCGAGGAGGCCGAGATGGGGAGAGGAGATTGGTGGCGCAACGCAATGCGGAAGAGAGGAGAAGCTTTTTCTCCCTTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0207600.1 | 3 | 9638635 | A | G |
| Osa03LNT0207600.1 | 3 | 9636581 | G | A |
| Osa03LNT0207600.1 | 3 | 9639175 | G | A |
| Osa03LNT0207600.1 | 3 | 9640528 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0207600.1 | osa-miR5543 | Translation | 4.5 | 23.566 | 1 | 21 |
| Osa03LNT0207600.1 | osa-miR396c-3p | Translation | 4.0 | 13.1 | 1 | 21 |
| Osa03LNT0207600.1 | osa-miR396c-3p | Cleavage | 5.0 | 24.182 | 1 | 21 |
| Osa03LNT0207600.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 18.943 | 1 | 20 |
| Osa03LNT0207600.1 | osa-miR319a-3p.2-3p | Translation | 5.0 | 15.776 | 1 | 20 |
| Osa03LNT0207600.1 | osa-miR319b | Translation | 4.5 | 18.943 | 1 | 20 |
| Osa03LNT0207600.1 | osa-miR319b | Translation | 5.0 | 15.776 | 1 | 20 |
| Osa03LNT0207600.1 | osa-miR169i-5p.2 | Translation | 4.5 | 14.264 | 1 | 22 |
| Osa03LNT0207600.1 | osa-miR169i-5p.2 | Cleavage | 4.5 | 12.204 | 1 | 22 |
| Osa03LNT0207600.1 | osa-miR444f | Cleavage | 5.0 | 23.802 | 1 | 21 |
| Osa03LNT0207600.1 | osa-miR1847.1 | Cleavage | 4.0 | 20.3 | 1 | 21 |
| Osa03LNT0207600.1 | osa-miR1877 | Cleavage | 4.5 | 18.459 | 1 | 24 |
| Osa03LNT0207600.1 | osa-miR2870 | Cleavage | 3.0 | 17.048 | 1 | 21 |
| Osa03LNT0207600.1 | osa-miR2905 | Translation | 4.5 | 17.655 | 1 | 21 |
| Osa03LNT0207600.1 | osa-miR1862f | Cleavage | 4.5 | 16.35 | 1 | 20 |
| Osa03LNT0207600.1 | osa-miR1862g | Cleavage | 4.5 | 16.35 | 1 | 20 |
| Osa03LNT0207600.1 | osa-miR5492 | Translation | 5.0 | 13.503 | 1 | 21 |
| Osa03LNT0207600.1 | osa-miR1855 | Cleavage | 3.5 | 22.171 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0207600.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0207600.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0207600.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207600.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207600.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0207600.1 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Osa03LNT0207600.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)