© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0018900.1
CTGTATATCAATCACTATACATTGGTTAAAATATATAACAAAAAAAAAACTGTTCAGATATATCTGTTCTACTTTACTATACACTTGTATAATGGCCTATTTGGGGGTATGTTCCATCAAAATGTGTAACTGATTCAAGAGTTGCAGGCTTGCAGCCAGCCTACTGAAAATGCTATTTACTTCCAACAGATAATACCCCCTTTCCATGTTTGCTTCGGAACACAAGATTGCCGATGCTCATTCAATCACAGTACCACGAGATCACCCAACCTTCATGGTTCAAATGTTGGGACCTCTGCAGAAGCACCCCAAGATGCCTGGTACACTGCACGCTGCGCTATGCTTCTGTAAGGATCTTCCTCCCTCTTCCTCTTCAGATATGACATTAAGCTCTCTACTTCGGATTTGATATGCAAATACACTTCGTTTGCACTTTTCCTATCTCTGACGACATTATCCATACCTTTCATTTCGATTGGTTTGCCAAATAGGTAGTAGAACCGGCCTGGCACTTTGGGGAGCAAAGCAGGTATGTGAACGTCTTGATTTCCATCCTCTCCTTTGACGCTATCCCTTACTCTTTGGGCTTCTCGGTTAATCGACTCAATCCATTCCCGAAGGTAGGGAATGTTCTTTTGATCATTGTAGTCGGCGACCAACTCTAAAACATCATCTTCTCCTACAAAACCAAATGGTATGATAGTAACACCAAAACGTGCTGCCATTCTTACAAATTCTGGTTGGTCTGGCCAAAACAACTTGTATGCTTCACCCTTCCTGTGAAGAGCTTCCCGCACACCGCCTGGATAGAGCAAAACAAATTGATTTCTCTCAAACAACCTATACATATTGATCGCAGTGACTGGTAATCCACCGTACATAGAAATTGTATCGAACCGAGACAGCTCCTGTCGCGAACTCTCATGTTTTCCTCCAAATAAAATTGGGTGAGCCATACCACGGAAACTTGTTCTCTTCTCTCTCAAGAACTCCTCGTACAATGGACTCAACTCGATCCCCATCAGTGCATGATAACCCACAAACAAGACAGGACCTTGGTCAGGAACACCAGTAAGGCCACGAACAATCTTCCCATTCTTCAGGGTAGACAGCATGACTGGGCTCAATGCAAGGTGAAACAATTTGTGATCTTCATCGAATGTTTTCTTGAACTCACTCAATGTCGGGGGAATGTAATCCGTCACAGGATCCCGTTGTCTGCCACGGCGGTACATATTTACTCCTTTTATGACTGATAAAAGATTAACACCGTCCTCCAACAGTAGTGTATGGCCATTGTCTTTGAAGTACCGAACTCTGCAGTTTTTCAGTGATTTGAAGAGTCTATCTGCCTCTTCTCCACTTGGCAGAAGATTATCATTGCCACTAGCAAGAAGTAGAACTTCAGCTTGTACAGCATGAAGACGAGAGTTAGCGTAGGCTGCTCCTGACTTCAGCAGCTTGAGTTTCCAGAAAAGAGTATCCCTTGGTATGATATCTGCCAATTCTGAAAGCAAAGGCAGCATGGAAGTGAGACTATCTGACAACTTCTGCAGAGTTTTTGGAGGAGAAAGGTTGTTCTCAACGCTGACCATAGCCATTTTAAGAGGATCGCCCATGACAAAACTGAGAAGATATGGAACTGTGACATGAAGTTCACTTGGCATTGCTTCCAACACAGGTAATATCGGCTGCAACGGAGTCTTTGCAAAGGACGTTGCTGGATTAATCAGTATGAGAACCAGATCAATTTGTGGATTACGAGCTGCCACCGAAAGTGCTAGGCATCCTCCAAATGAGTCCCCGATGAGATATATGGGTCGGTTTGGTGACATAGCATGCTCATATTTGATAGAATTTTCCACAATCTGCAACAACCCTTCAAATGGCGTACGATCATTCACTGGTATATGCAAGCAGCGAACCTCGAATACCCTTCCCAAAGACTTGTGGTGCAAAATGAGCCCCATTCCAACACCATCAGTTCCTGTTGTGCAGTCAAATCTAATCAGAAATTGTTAACACGCAATACTCTAATTTAACCACTCAGGCGACAGCCTTTTTGGGAGATCTTCCTTTGTTTCTTCCATACCAGGATCCTATGTCTTCAAAATCACGGTGATTTTATCGCTGACATGTGGACCAAGTTAGAACTTACTGTATTTATTTTCCAAGAGTTTTGACAGTAGTATTCCTCTGTTTATCCGAGTTAGCATATCGAAATATATATATATTCATAGCTGAACACTACCCCAGGAAATGAAAAAAAATATATAATGGTATAATACTGATATGAAAAATGAATATGTGGATTATGATCCTGCAGGGACATGGCAATTGTCTCATCATGTGATTTGCTGCTAAGTCTGGTTTTTACTCTGTAATATAATTGTAGCCGCGAACAAACAGTAATTAGCTGTGAATATTTGGACGGAAGCAACGTAATTAACGTATACCTGGCAAGAAGAGCAGCAGCGGCGCGTTGTCCACCGCCGGCCGGCCGGCGTCGACGGGGCAGAACCACCGCGGCGGGCCGCCGTCGTCGCTGGAGACGGCCCTGGCCGCCGCGAAGTAGTCCTTCACCGTGACGCCGCCGAACCCGTCGTCGTAGAGAGCCTCCACCACCCTGCCCGTCCTCACCTCCGCCGCATCCTCCCTCCTCTTCTCCTCCTCCTCCACACCCACCTGCCGCTGCTGCTGCGTCTCCGCATTCACGGACACCGCCACCGACGCCGTCCCCACGGAGCTCGCCGCCCGTAGCGTCGCGGAGGGCCGCCGCCACCGACAGCCGAGGCCGCCAGCGGCGACGGCGGGGAGCGTGTGGAGCGCGGCGGACATGGCGGCGGAATGCGCGGCGCGGCTTTGGTCGGAGAAGCAGGGGGGAGGAGAGGAGAGGAGATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0018900.1 | 1 | 14763097 | G | A |
| Osa01LNT0018900.1 | 1 | 14755328 | T | C |
| Osa01LNT0018900.1 | 1 | 14755525 | C | A |
| Osa01LNT0018900.1 | 1 | 14755527 | G | A |
| Osa01LNT0018900.1 | 1 | 14755803 | T | C |
| Osa01LNT0018900.1 | 1 | 14756070 | A | G |
| Osa01LNT0018900.1 | 1 | 14756246 | G | A |
| Osa01LNT0018900.1 | 1 | 14757151 | A | G |
| Osa01LNT0018900.1 | 1 | 14757654 | T | A |
| Osa01LNT0018900.1 | 1 | 14757917 | G | A |
| Osa01LNT0018900.1 | 1 | 14758130 | G | A |
| Osa01LNT0018900.1 | 1 | 14758400 | C | T |
| Osa01LNT0018900.1 | 1 | 14758497 | A | T |
| Osa01LNT0018900.1 | 1 | 14759032 | C | T |
| Osa01LNT0018900.1 | 1 | 14759051 | T | C |
| Osa01LNT0018900.1 | 1 | 14759059 | A | G |
| Osa01LNT0018900.1 | 1 | 14759071 | A | G |
| Osa01LNT0018900.1 | 1 | 14759109 | A | G |
| Osa01LNT0018900.1 | 1 | 14759151 | A | G |
| Osa01LNT0018900.1 | 1 | 14759465 | A | G |
| Osa01LNT0018900.1 | 1 | 14759883 | G | A |
| Osa01LNT0018900.1 | 1 | 14760611 | C | T |
| Osa01LNT0018900.1 | 1 | 14760628 | T | C |
| Osa01LNT0018900.1 | 1 | 14760629 | T | C |
| Osa01LNT0018900.1 | 1 | 14760660 | A | G |
| Osa01LNT0018900.1 | 1 | 14760680 | C | T |
| Osa01LNT0018900.1 | 1 | 14760712 | C | T |
| Osa01LNT0018900.1 | 1 | 14761009 | T | C |
| Osa01LNT0018900.1 | 1 | 14761547 | T | C |
| Osa01LNT0018900.1 | 1 | 14761709 | G | A |
| Osa01LNT0018900.1 | 1 | 14761744 | G | A |
| Osa01LNT0018900.1 | 1 | 14761748 | T | C |
| Osa01LNT0018900.1 | 1 | 14761771 | C | T |
| Osa01LNT0018900.1 | 1 | 14761775 | T | C |
| Osa01LNT0018900.1 | 1 | 14761831 | T | C |
| Osa01LNT0018900.1 | 1 | 14761852 | A | G |
| Osa01LNT0018900.1 | 1 | 14761877 | T | C |
| Osa01LNT0018900.1 | 1 | 14761878 | T | C |
| Osa01LNT0018900.1 | 1 | 14762077 | T | C |
| Osa01LNT0018900.1 | 1 | 14762569 | T | C |
| Osa01LNT0018900.1 | 1 | 14763496 | G | T |
| Osa01LNT0018900.1 | 1 | 14762802 | A | C |
| Osa01LNT0018900.1 | 1 | 14757650 | A | T |
| Osa01LNT0018900.1 | 1 | 14759011 | T | C |
| Osa01LNT0018900.1 | 1 | 14761881 | A | T |
| Osa01LNT0018900.1 | 1 | 14762619 | A | G |
| Osa01LNT0018900.1 | 1 | 14760615 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0018900.1 | osa-miR7695-5p | Cleavage | 4.0 | 15.948 | 1 | 24 |
| Osa01LNT0018900.1 | osa-miR160c-3p | Translation | 4.5 | 20.727 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR160e-3p | Translation | 4.0 | 20.727 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR1847.2 | Cleavage | 4.5 | 18.422 | 1 | 24 |
| Osa01LNT0018900.1 | osa-miR827 | Translation | 5.0 | 13.458 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR2864.2 | Translation | 3.5 | 13.855 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR2864.2 | Translation | 4.0 | 19.594 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR2905 | Cleavage | 3.5 | 17.302 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR2918 | Cleavage | 4.5 | 16.421 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR5152-3p | Translation | 5.0 | 11.279 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR5492 | Cleavage | 5.0 | 9.303 | 1 | 21 |
| Osa01LNT0018900.1 | osa-miR2275c | Translation | 4.5 | 14.204 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0018900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0018900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0018900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0018900.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0018900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0018900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0018900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)