© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0207900.1
CAAATCTTGAGCGAACAAACTTGTTACAAATCTATATTAGGCAATGGTGCTCAAAATCCACAGACAGTGGAGTATTTCACTGTACTCGGTCAGCATGTTTTTCAGTTTCCATGGAATTGCGGGGATTGCAAGTTTCCAGCAATAACCTAATAACTTTAATTCTGATGTTTTACCGTATCTGGATGGCCGTCCACAAATTCCTTCTTGTGAAACCGTGTTGGGTTGATGTCACTGAGTAGCACCAGCCAACCTGTACATCTGTATACACTACCTTATCTTAGGATGACTCTGCAAAAGGTTGAGGAACTGTCACTGCACAGTCCTCACAGCTTTCCTCTTCAACCAATGATTCAGAGAGTTGATCGGGATCTTTATCATCCCCTGCGGTCTCCTGGAAAAATGTTTAGAAGCTAGATCTAAATGACTCCTAGAACGAGCTGGAACTGTGGGTTTGGACGAAGCCGGGCGACTTCCAGGTCCAATTAAAACCTCAAGACCCAACTCATCCGTCAGAACAGCAACTATTGCATGCTCGACCTCGACAACACTAGTCTCGGCCTTGGCGCTTGATGCCTTCCCATGACCAGTGATGATTACTACATCATCCTGAACTGCTCGTCCTAGTAGATACTTCTCTTTGATCTTCCGGAGAACTGAGAGAACTACAACGCGAGATTCAACCTTTGAAAGCCCACGAACATCGACAGTTTGGTTTTGATCAACATCTTTCTGCAAGAATGTTGTCACTTTCTCAAGAACGAGCTTGAATGATTCTTTCCTCTGATCCAATTGGTAATATTCTCGATTTCCATTACCGCTAGACAAAACTCCTTCACACCATTCCACTATCAAATTCTTGAGGTAATAGTCATTTGCTTGATACCCAGCCTTTCTCATTTCTTGATAGATTGCCAAACATTGCTGGACTTCCTGTAATGATCCATATTTATTGCGTGCTGTCAAAAGAGTCTTGTATGTGACCAAATTGGGTTTCAGTTGATGTGCTTTCATTTCTTCAAACAAGTGCAATGCCAACTTCAAGTCTTTGTTTTCAACGCATGCCTTAATAGCAACAGTATATGCAGTGACATTAAGTTTCATTCCAACACGTTGCATTCTTCTGAGTGCCTGAATAGCTCCATCCCTGTTTTGAGATGACCCATAAATATCCATCAGAATAGACCAGCTAATAAGGTCAGGGCAAAGGCCATTTCGCCTCATTTCATTCATTACAGATTTTGCGCGTTCTCCATTTGTGCCACAGGCCTTCATTAGAATATTATATGTTGTAACTGTTGGTCTAAATGGAACCACTAACAGAGTACTGCTGTTACTTGTATGTTCTTCACAGTATGAGAAGTTGTCACCAAAACATCCTTTCTGTTCAGGGGATAGAGATATCTTGACTCCATATTCTTTCCAGTCATAGAACAAGCGGAAAGCTCTATCATACTGGCATGACTTAACACAACCAGTAAGGATAATATTGAAGCATGGAGCAGTAGGTTGACAACCATCCCTTGTCATTTCTTCAAGTATCTCTATGGCACGGTCAACTAAACCAGAATTTGCATAGGCGTTGATTAATGATGACCATGTGACTAGGTTAAGACGAACACCAGCTGATTGCATATCCTGTTTGATGTCGGAAGCCAGCTTCCACATTTTTGCATCTTCATCATTGTACTGTATGTAAAAACATCTAACTTTAAAAGACCGTTCTGTTCCTTTTTCTTAATTTCCTCATAAATTTCTTGAGCCAACTTATACTCCTTAGCGTTGCAGCATGTCTTCAGAAGAATGTTATATGATGTCAAATCAGGAGGGACGCCAAGATTTTGCATGTGCTTGTAGACTGAAAAGTTGTAGCTGAAGCTATGGGCATTCACATTCATAAGGCTGTTGAAGACATAGACATTTGGAGTAATCTTATCAGCAAGAAGCCCCTCGAATATAATTCGAGCCTGCACAGAAGAACCACAATGACCACATATGTCGATGATACTTCGGCATGCAAACATATTGATACCTCCAAACTGATCCTTGAGTGCTCCAAAGACTGTTAGAGCATGCTTTAACTCCTTTCTTTTCCCAAAAGCTTCCATTGTATTGCACAGCAAAAGTTGGGATTGAGGAAATATACGTGCATACCTTATTGCCATATTTGGGTCACGCTTCTTGACAAATATTTTCAATACATCCATCGGATCCACAATGCCTTGAACAAAGAATCCACACTGAGCTAGCGCCTCCACGGCCTCGACGAACTCCGTCATGCTGCGCTCAGCCAGCAGTAGCCGGCAGGCGGCCGCGACGGTGTCGTAGGCGTCAGCGTCGAGCATCACGGCGGCGCGGATCCCGACGCGGCCGGCGTCGCGGAGGAACTCGAGCACGTGGGGAAGCCCCTGGTCGCGGAGCGCCGCGGCGACGCCGCGCGAGAGGAGGCGCCGGCTGATGCGCCCCTCGAATCCAGCGTCCCCGGAGGCCGCGCGGAGGCCCTCGGCGGCGAGGAGGAACTCCCGGAGCCGCCCCGCGCCCACGAGGTTGGATGCGACGCGGGAGTAGTACTTGATGGCGGTGGGATCGCGCCCCACGTCGGAGAGGAGCGGGAGGGCGGCCTTGGCTTTGGGGCTCGGGCTGGGTCTGCACCTGGAGGGCGGACTGGATACCCCCGGTCGCAGGAGCGGCCGCCGCCGCCACCGCCGGCGTGGGGAGGGAGGCGGTGGCTGCGGCGAGGTGGAGGTCATGGCCAACGCCATGGCCGCGCGAGTGGGATTGGAGATGGAGGAGACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0207900.1 | 3 | 9803198 | A | G |
| Osa03LNT0207900.1 | 3 | 9812525 | G | C |
| Osa03LNT0207900.1 | 3 | 9799375 | C | G |
| Osa03LNT0207900.1 | 3 | 9800688 | G | C |
| Osa03LNT0207900.1 | 3 | 9801181 | C | G |
| Osa03LNT0207900.1 | 3 | 9801266 | C | T |
| Osa03LNT0207900.1 | 3 | 9801309 | A | T |
| Osa03LNT0207900.1 | 3 | 9801803 | A | C |
| Osa03LNT0207900.1 | 3 | 9802253 | A | G |
| Osa03LNT0207900.1 | 3 | 9802444 | A | G |
| Osa03LNT0207900.1 | 3 | 9802911 | T | C |
| Osa03LNT0207900.1 | 3 | 9802994 | T | C |
| Osa03LNT0207900.1 | 3 | 9803730 | A | G |
| Osa03LNT0207900.1 | 3 | 9803935 | T | C |
| Osa03LNT0207900.1 | 3 | 9804523 | T | C |
| Osa03LNT0207900.1 | 3 | 9805142 | A | G |
| Osa03LNT0207900.1 | 3 | 9805289 | T | G |
| Osa03LNT0207900.1 | 3 | 9806477 | T | C |
| Osa03LNT0207900.1 | 3 | 9806574 | G | A |
| Osa03LNT0207900.1 | 3 | 9806575 | T | C |
| Osa03LNT0207900.1 | 3 | 9806777 | C | T |
| Osa03LNT0207900.1 | 3 | 9807214 | A | G |
| Osa03LNT0207900.1 | 3 | 9807422 | A | G |
| Osa03LNT0207900.1 | 3 | 9807423 | A | G |
| Osa03LNT0207900.1 | 3 | 9810033 | A | C |
| Osa03LNT0207900.1 | 3 | 9810060 | T | C |
| Osa03LNT0207900.1 | 3 | 9810281 | C | T |
| Osa03LNT0207900.1 | 3 | 9810432 | A | G |
| Osa03LNT0207900.1 | 3 | 9810547 | T | C |
| Osa03LNT0207900.1 | 3 | 9810810 | A | G |
| Osa03LNT0207900.1 | 3 | 9810982 | T | C |
| Osa03LNT0207900.1 | 3 | 9811931 | T | C |
| Osa03LNT0207900.1 | 3 | 9813186 | A | G |
| Osa03LNT0207900.1 | 3 | 9813940 | T | C |
| Osa03LNT0207900.1 | 3 | 9815514 | A | G |
| Osa03LNT0207900.1 | 3 | 9815598 | T | C |
| Osa03LNT0207900.1 | 3 | 9816662 | G | A |
| Osa03LNT0207900.1 | 3 | 9817584 | G | A |
| Osa03LNT0207900.1 | 3 | 9817585 | C | A |
| Osa03LNT0207900.1 | 3 | 9818064 | A | G |
| Osa03LNT0207900.1 | 3 | 9818620 | G | C |
| Osa03LNT0207900.1 | 3 | 9822020 | G | T |
| Osa03LNT0207900.1 | 3 | 9805381 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0207900.1 | osa-miR5544 | Translation | 4.5 | 12.798 | 1 | 22 |
| Osa03LNT0207900.1 | osa-miR172a | Cleavage | 5.0 | 13.656 | 1 | 21 |
| Osa03LNT0207900.1 | osa-miR172b | Cleavage | 5.0 | 13.656 | 1 | 21 |
| Osa03LNT0207900.1 | osa-miR172c | Cleavage | 4.0 | 13.656 | 1 | 21 |
| Osa03LNT0207900.1 | osa-miR166h-5p | Translation | 5.0 | 8.773 | 1 | 21 |
| Osa03LNT0207900.1 | osa-miR172d-3p | Cleavage | 5.0 | 13.656 | 1 | 21 |
| Osa03LNT0207900.1 | osa-miR1428a-3p | Translation | 5.0 | 12.868 | 1 | 21 |
| Osa03LNT0207900.1 | osa-miR1428a-3p | Translation | 5.0 | 15.598 | 1 | 21 |
| Osa03LNT0207900.1 | osa-miR1435 | Translation | 3.5 | 18.346 | 1 | 20 |
| Osa03LNT0207900.1 | osa-miR1864 | Translation | 5.0 | 14.966 | 1 | 24 |
| Osa03LNT0207900.1 | osa-miR1878 | Cleavage | 5.0 | 21.326 | 1 | 24 |
| Osa03LNT0207900.1 | osa-miR2097-5p | Translation | 3.5 | 11.792 | 1 | 22 |
| Osa03LNT0207900.1 | osa-miR2879 | Translation | 4.5 | 11.607 | 1 | 24 |
| Osa03LNT0207900.1 | osa-miR5076 | Cleavage | 5.0 | 8.643 | 1 | 22 |
| Osa03LNT0207900.1 | osa-miR5076 | Cleavage | 4.5 | 14.847 | 1 | 22 |
| Osa03LNT0207900.1 | osa-miR5338 | Translation | 5.0 | 18.033 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0207900.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0207900.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0207900.1 | 3 | OsORR73 | Physiological trait | Flowering | nan | nan |
| Osa03LNT0207900.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0207900.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0207900.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207900.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207900.1 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)