© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0208300.1
GACAGCGAAAAATGAGGAGATATATTAATTACGGTGTATCGTTTCAAGGATGAGTTCGGATGAGTGATCGATCACTCTCCACATACTTGGATCGGTCTCTCTCGCACACGTACAACGACAAGGGGAGACGGTACAACAGCAGCGGCAACAAACACGCACGTACACGGGTAGTACTACAGAACGCGCCAACGTCATGGGCGATTGGTGAGAAAACACGCACACCTACTAGTACTAGCTTTATCCTTTTTTAGTGTACACCACACGGCCGTCGACGATCTCATCGGCTAGCGCGATCAATGGCCGTCCGGCCGGCCAGCTTCGAGCGTTATGCTTCCATCTTCCCGTTGGCTGTCCCGTTGGCCACAACCAGGCCGACGCCGTTCGTCCCGTTGGCCGCCATCGCGCAGTTGCCGTTGGCCTTGCCGTTGCTGTTGCCGTTGGCGTTGGCGTTTGCGTGGTTGGTGTGGTTGGCGGAGGCGGAGGCGGAGTTGTGGGAGGCGATCAGCCGGCCGGATGGGTCGTGCGACGCCTTCCACTGCTCCACCCACTCGATCGCCGCCGGCGTGCTGCACGCGATGCTCGGGCCCCACGGCACCGTCTCCCTCGCCGATTCCTGCGGGAAGAGCCTCTCAAATATCATGCGGTAGTAGTACGCCTCCTTGTTGACGGGCGTGTTGTGCGGGTACACTTTGGCAGCGTTCTTCATCATTTCATCACTGACCTGCTGCTCGGTGAAAGCCTTCAGGCCATCGATCCAGTTGTAGCCGACGCCATCACTGAACTGCTCTTTCTGCCTGTACAGTATGTGCTTCGGCAGGTAAGGATGCTCCTCGTCGTCGAACGCCTTCCTCATAACCCACTTCTCGATGCGACCAAGATCAGCATTGTACATCTTCCACTCAGGGTCCATGCTCATGGCGACGTTGATGAACTCCTTGTCGAGGAACGGCACACGGACCTCCAGTCCCCAGGCAGACGTCGCCTTGTTAGCACGCAGACAGTCATACTGATGAAGTGCTTTCACCTTGCGGCAGGTCTCCTTGTGGAACTCTTCCTTGTTGGGGGCGAAGTGGAAGTAGAGGTAACCGCCGAGGAGCTCGTCGGAGCCTTCACCGGACAGCACCATCTTAACCCCGAGCGCCTTGATCTTGCGCGCCATCAGGAACATCGGCGTGCTGGCCCGTATCGTCGTCACGTCGTACGTCTCGTCGTGGTAGATGACCTCCTCGATCGCGTCGATGCCATCCTGGACAGTGAAGTGGAACTCGTGATGGATGGTTCCTAGGTGGTCAGCGACCTCTCGTGCAGCTATCAGGTCAGGGGAACCCTCAAGGCCAACGACGAAGGAATGGAGCTCAGCTCCGAACTTCTCGGCGGCTTCAGTCTTGATGAGGTGGCGCTTGGTCACCGCGGCGACGAGGGAGGAGTCGAGGCCGCCGGAGAGGAGGACGCCGAAGGGCACGTCGGTCATGAGCCTCTTGATGACGGCCTTCTCGAAGGCCTCTCTGAGGAGGAGTGGCTGGTACGGCGTCGCCGGGACGTTCTCGGCGAACCACTGCGGCTTGTACCACCGCCGGAGCCCGCCGGCGGCGCTGGAGTAGAGGTGGCCCGGAGGGAAGATCTCGAACTCCACGCAGTCCTCGTTCAGCGCCTTCATCTCGGACGATATCCAGACGGCGCCGTCGCTGCCCCTGCCGATGTAGAGGGGGTTGACGCCGATGGCGTCGCGGGCGGCCATGTACGTCTTGGTGCGGGTGTCGTAGAGGACGAAGGCGAACACGCCGTCCAGCATGTCGACGAAGTCCTCGCCGTACTCCTCATACAGCGGGATGATGACCTCGCAGTCGCTGCCGGTGCTGAACGTGTGCTTGGAGGCGAACTGCTTCCTGATCTTCTTGTGGTTGTAGATCTCTCCATTGGCCACGACGACGATGGTCCGGTCCGCGTTGTACAGCGGCTGGTCGCCGGAGAGCGGGGAGACGATGGCGAGACGCTGCTGAGCGAGGAAGTTTCCCTCGCACTGGTACAACCCGGACCAGTCGGGTCCCCTGTGCTTCAGCCTACAATATCACACCGGACCAAGTCTCCCGGTCAGAAAGAACCAATCCGTCCCCAAAAGAACCATGCAAGTATACGCATCACGGCAACAGCGAAAAATAACATCTAAACCCATGGGTCTTAATGCACAACGAAGATTCCCGTGTTCCTTTTTTCTGGGTCGGTCCTTTGTTATTACTGTCTCATATCCTTACGATTCCTATGCGAACCCCTCACAAAGAGACAAAAATACATAAACAAGGACAAAACCACAACAACCACCACACCCCCCATGATCCCTACGCCTCTTCACTATAGCAAGTTCAAGAGCGGTAAAGCCGGTGGGTGCATGACAAGTTGGTGACCGGAACAGTGAACACGTACGCACGCATGTGTCGCACCGGCACGTTCATCACCCATCACCCTCGTGATCGATGATCATCATGCATGCGTCCGGCTAAAATATGGATAAGAGAATTAAGATATTGTGCATGTACAGCGCGCGGGCGGGGGTGTGTGGCGTGCTTGCCTGCGGGAGCAGGAGAGGACGTGAGCCCTCTTCGCCTGCGACCAGTCGGCGGCGCCGAGCACGGCCAGGATCCCGCACATGGTGGCGCCCGGTGGTGGAACTAACGGCGAGGCCGCGAGGATTACTACCGAGATTGAGACGGTGGATGGATGCGTATGGGTGGGGAGTGTGATGCTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0208300.1 | 3 | 10120511 | A | C |
| Osa03LNT0208300.1 | 3 | 10120418 | A | G |
| Osa03LNT0208300.1 | 3 | 10120597 | G | C |
| Osa03LNT0208300.1 | 3 | 10120689 | A | C |
| Osa03LNT0208300.1 | 3 | 10122183 | C | T |
| Osa03LNT0208300.1 | 3 | 10123498 | T | C |
| Osa03LNT0208300.1 | 3 | 10123719 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0208300.1 | osa-miR5537 | Cleavage | 4.5 | 11.039 | 1 | 22 |
| Osa03LNT0208300.1 | osa-miR818f | Cleavage | 5.0 | 19.484 | 1 | 21 |
| Osa03LNT0208300.1 | osa-miR399h | Translation | 5.0 | 23.792 | 1 | 21 |
| Osa03LNT0208300.1 | osa-miR166g-5p | Cleavage | 5.0 | 23.821 | 1 | 21 |
| Osa03LNT0208300.1 | osa-miR390-3p | Cleavage | 5.0 | 20.499 | 1 | 20 |
| Osa03LNT0208300.1 | osa-miR535-3p | Cleavage | 4.5 | 18.218 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0208300.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0208300.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0208300.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0208300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0208300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0208300.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0208300.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0208300.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0208300.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)