© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0208400.1
GGGGGATGAAGCACATGAGCAGAATGTAAATGGTTGTTGCAAACAACAAATGTTTCGTTTTTGAAGTAAAAAAAAGCAAAGGATATCGATTCTATACATTTTCATATGTTCTCTTTTCAAATGGTTTCCTATAACATGTCAATATCTGATCTAGGAGTATTGGGACTTTGGGAGTATATCCTATCAAGAAAACGGCTATCCCTGAATATGCTACCCCATACTTGTTACATTCACTACGAAAGGAATATCCTTGAGACGTCAGATAGTCAGTGTTTTATGTATGCTAAATTTTGGACGTCAGTGTTTTTTTGAAGGTGCCATGGTGTCGTAACTATCGAACAGCACACTTCAATGTCAGTAAAAACGATGTAGTAGCCACATGTGTCCATGCAAATTGTATGGCTTGTGAGTTGTGATGAAGTGTTTGTTCGGAGAAGGGACAACGGCGAAGAGAATCGCCATGGTGCACATATTATCCAATCTCCAGGGCCTGCCACAACTGCGCAATTACTAAAGGATCGATCCTGCTGATAGCTGCATTGAAGACTGCATCACCATGCAGAGCTGCACATTCTTTCAAATTCTCTCTTAGCATGTCGACAAGCGATGCTTTTCTAATGGGATCCAGCTCCCTTATTTGCGCCTTCTTGAATTCCTTACTCGTATTGGAATACTCTGGATCATCACTAAGAGGCAATGAAGAGATTGTATCGTCACTAGAATCATCACTGGTAGTCCTCCCATGTCCTCCAATAATAACACTTGTACATAATCTCAGAATATCACCAAGTTTCTCGATAACTCCAGGTATATTTGCAGTCAAAATTACAGAAAGAGCCATTGCATATACCTTTTTCTCTATAGAGCTTGCGTTATCTACCTACAGAATGTAAATGCCACTATTTTGTTAATCATTAATGCAGAGAATCTTCCATATTAACAGCTTATATTTCCACAGCGAAAGGTCTAAAGTATTGAGAACTGCACAGTTCATAAGGTTTTCAGTGCCTGACCTTAATAACAATACCTGATCACAGAAACTGACAAACCAAGAAATAACTTCATGAACTCCAAGAATATATAATAGATTTTGCTAAAGCACAGGTCCAAGTCACAAGTTGGAAGGGTGCAAGAAACTGAAGTCCCCATTTTGAAGGACCCACTTTACATAGTATTTGGACTAACAATTTGTTAGGTTATGTAATACAGTATTGCTAGTGAATACTGATATTAGATAAAAACCATTCTGCTCAAAGCTGTAAATTAGTTAGGTACAGAATAGTAGATGTTCGGTAGAAACATGTATGGTTGGACTTTGAGACAAACCAGTAAAAGTTACTGGCATTCATATGCAGATTGATGCTCTGTCTGAGACTGAACCGTGATGATGCACATACCTTGTTAATCCACCAATCAACCAAAAGAAGAAGTAGATTCTGGTTTATCCCTGCTTGTTGGAACCTTGCTATAAGTGCTGGCTCTGATAATAGTTGAGCTAAAAAGTCTCTATTCAGCAGAAGAAGCCTAGCAAGAATTGCTGCAGAAGTGACACAAACAGCAGTCCTAGAAGGATAATGCTCATCACCACCACTCAATGATATGAAAACAAGTTTCTGAAGAGCACTTGATATCAGAGGTGGAACTTCCTGAGGAAACATCAGAACAAGAAGATCAATGATAGGAAGTGTTGTGAGAAGGCCCTTATCATCAGCATTGCCCACAATAGTATCAACGATGCTTTCTAAACTTGTGGCATGGCTTTGCAAGAGATCTGATCCAGCAAAAACTATGTAGTGCTCTATTATTTTGATCATGATCTCCAAATGATTGAAGCTCCCATTCATGATGCCCACAAGATAAGGGAAGCAGTCCAGCAGTTGAGGCACAATGGAAGGGGCATTAGAAAGAGTTGCTTCCAACAACAAAACAGTGTCCTCAAGAAGATTAAGAGCGTTAGGACTATCAACATCCATGCCATATTGGAGTATAGGAAGAACCATGCCATAACAAAGTGGAGAGTTATACCCAAGAGAAGAAATAAAAGTTCGAATTGCATCTAGAAGTTCTATCTGTAGTAAACATTCACCAGATGATTCCTCCCAGGTCTTTAGAAAAAATTGTGATAGCTCGCTCACAAATGGAATGATCCTGTCGTCCCCAACATAATTAAGGAGAACCAGAATAAAACTCAGGACTTGCACCTTTGAATCAAATTCTTGAACAGCTCCTATCAACTTGAAACACATTGCCCAACATGTAGGAATACACTCAAGCAAATCTACTTCCCAAATACCAAAAACTCGGAAAGCGTAACATAGGGAAGAGCATGCTGCCAGCCTAACGGCCATGTCCTGATCCCCAAGAAGTCCAACCAAAGCATCGCAGACCTCTTTCTGAATAACGCCCTTTATCTCAAAAGCACATTGTCCAAGTAACAATGCAATTCTTCGACGAATGATGCACATATTGGGGTTGCCATTTGAAAGATCAATAGATAGATATCCACAGAACCTGCATAATTGAGCAGGAGCAAAGGTAGCGATGCAACTTTCACATAACATGAAAGCCACAGAAACCGATGAATACCCATGGATCCTTAGGTTCATTAACATTTTGTATGTATTTGAATTAGGCTATATTGTTCATCTACTAGTCCAGTGCATATTATCTAGCATGAGTAAATACAGAAGGTATTACACACCAAGAAACTTACCATTCATCGAAACTAAGGTACTTTGAGAGTTCATCAAAAACATGGCCAGCAGCTGTATAAGCAGCCTCCTTTAAAAGCATTCCAGCAGTAATTTCTATTTCAAGTGGAGGCGAAACAGCTTTGACATCATGGATGATGGAGGCAACAAAAGGAGCAAGTTGCACTCCGTAGTTGTCAAACAAAATAATGAAAAGTGCTTCAGCACATGGTCGGCGTTTCTCTGTACATTGTAGCAGATTCTGCTCGTGATGAAAGGATTCAGGATTGGAATGCCATTCATTCATATCTGTTGCTGTATAAATGAAGTGCCTCCTTATTAATATATCGCATAGCAGCATAATACGGTCAGCAGGAAGAACAGACATCACCATGCTGCTGGCAGTAGCTGAAAGGTTGTTCTTCCTTTGATCAAAAATTGCATGTTCTGAACTTCCAACTGCTTCAAAGCCTATTTGACCTGGTTTGTATTCCTGACACTCCAATACTAATTTCACCAAAACCATGCACTGGACAAGAAATTCCTCAAAAGATGTATCTGCCTGTTCAGGATTTGTGATCATAGTCAAACAGAAGTCAACTGCTGCTGGAAGCACAGTTTCATGAGCAAATGAATAAGGATACTTGTCTTGTAATATAATAAGAACTTTCATCAGCTTAATGCATGCTCTTTTTGCATGGCTCCACGGCTTAGCTTGCCTTTCTTTGAAGAAGGGATAATATGGAAGAATAGATTGAATAGCACCCAGAAGTACCGGACAGACTTCCTTGATTTGACAGACTTCCTGCATGGTTGTTGAATCACTTGCATAACCTGAGCAAATCAATTCGCGAATGATCTTCAAACAGACTAACCATCTTTCATATATTAACAGTAGATCATTTGATTGGTCCAAACTGGAATTATGCTGAGAAAGCACTGAAAAATTTTGTAATACAATCTGTGCATTGCTCTTCCAGAGGTTCCAGATATAATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0208400.1 | 3 | 10193871 | T | A |
| Osa03LNT0208400.1 | 3 | 10193879 | A | T |
| Osa03LNT0208400.1 | 3 | 10191799 | T | A |
| Osa03LNT0208400.1 | 3 | 10191805 | A | G |
| Osa03LNT0208400.1 | 3 | 10192732 | T | C |
| Osa03LNT0208400.1 | 3 | 10194544 | T | G |
| Osa03LNT0208400.1 | 3 | 10195784 | C | A |
| Osa03LNT0208400.1 | 3 | 10196857 | T | C |
| Osa03LNT0208400.1 | 3 | 10197142 | A | G |
| Osa03LNT0208400.1 | 3 | 10199055 | A | G |
| Osa03LNT0208400.1 | 3 | 10199208 | T | G |
| Osa03LNT0208400.1 | 3 | 10193268 | T | G |
| Osa03LNT0208400.1 | 3 | 10197953 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0208400.1 | osa-miR5527 | Cleavage | 4.5 | 18.926 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR5536 | Cleavage | 5.0 | 16.122 | 1 | 22 |
| Osa03LNT0208400.1 | osa-miR5541 | Translation | 4.0 | 14.522 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR5543 | Cleavage | 4.0 | 8.066 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR5797 | Cleavage | 4.5 | 6.771 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167a-5p | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167a-5p | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167b | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167b | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167c-5p | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167c-5p | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR397b | Translation | 5.0 | 17.357 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR164c | Cleavage | 5.0 | 9.53 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR164c | Translation | 5.0 | 16.47 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167d-5p | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167d-5p | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167e-5p | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167e-5p | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167f | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167f | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167g | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167g | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167h-5p | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167h-5p | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167i-5p | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167i-5p | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167j | Translation | 4.0 | 17.617 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR167j | Translation | 5.0 | 22.201 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR1854-5p | Translation | 5.0 | 10.494 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR1854-5p | Cleavage | 4.5 | 7.73 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR1870-3p | Translation | 4.5 | 17.735 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1873 | Translation | 5.0 | 17.376 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1882a | Translation | 4.0 | 21.382 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1882b | Translation | 4.0 | 21.382 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1882c | Translation | 4.0 | 21.382 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1882d | Translation | 4.0 | 21.382 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1882e-5p | Translation | 4.0 | 21.382 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1882f | Translation | 4.0 | 21.382 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1882g | Translation | 4.0 | 21.382 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR1882h | Translation | 4.0 | 21.382 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR2122 | Translation | 5.0 | 13.912 | 1 | 22 |
| Osa03LNT0208400.1 | osa-miR2275a | Cleavage | 4.0 | 21.543 | 1 | 22 |
| Osa03LNT0208400.1 | osa-miR2275b | Cleavage | 4.0 | 21.543 | 1 | 22 |
| Osa03LNT0208400.1 | osa-miR2871a-3p | Cleavage | 5.0 | 9.354 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR2871a-3p | Cleavage | 4.5 | 8.815 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR2871b | Cleavage | 5.0 | 9.354 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR2871b | Cleavage | 4.5 | 8.815 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR2878-5p | Cleavage | 5.0 | 16.076 | 1 | 24 |
| Osa03LNT0208400.1 | osa-miR2922 | Cleavage | 4.5 | 12.435 | 1 | 20 |
| Osa03LNT0208400.1 | osa-miR2873b | Translation | 3.5 | 13.413 | 1 | 21 |
| Osa03LNT0208400.1 | osa-miR5081 | Translation | 5.0 | 10.634 | 1 | 22 |
| Osa03LNT0208400.1 | osa-miR5081 | Translation | 5.0 | 16.453 | 1 | 22 |
| Osa03LNT0208400.1 | osa-miR5160 | Translation | 4.0 | 14.172 | 1 | 22 |
| Osa03LNT0208400.1 | osa-miR5518 | Translation | 4.5 | 16.722 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0208400.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0208400.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0208400.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0208400.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0208400.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0208400.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0208400.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0208400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0208400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)