© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0208700.1
AACACCTCAATCCAATTGCAGATATTATGCATTCAGTCAACAAAACATCCATGAGATGGGGCCGCATTGCACACCTGCAAATAGTCGGCATGCAACAGCAAAGGGAGAACACCCACATAAAACGGCAAGGAGAATCGCCACGAGCAACCAACACACTGCGGCGATCACTGGCTACTAAATAATGCATAGAAAGAGCGAACTGACGAAGAGACTTACGAATGCTCAATCTATTTTCACCTCTTTTTTTTTACAGGAATGATCCTACCTACCGGAAGTAAATGGAGATGAGAGGGATGTCGACGTCATTCCCATCATCATCTTCACAGGCAACGACGACATCCAGGTGCCTCCTGTATGCCGGAACGTCCACCTTCGCCACCTCCTTGGCGACATCCACGAGCTTCTTGTTCACTCGATCCTTGTGTCTCGGAAACATGGTGTTGTAAAGCAATGAAGTGCCGCAGGAGACACTGTACGCGCTCAGGCCCTTGTCACTCAGCCACTTGAGGAGTTCTGCGACAGTGATGTTGCCCTCGATAGACCACCGATCCCATATGGTCCATCTCATGTCTTGATGCTTGATCACCTTGGGTGGAAGAGGTTCAGCCATGGAGAACATTGGTATTGCCAAGTTAGCAAACGAATTGCGGTAGTCTTCGACGGGGTGCCCACCAGCCAGAACCTTGTAAAGCTCAAGGCACACAAGTCCTGTTGCCATGGCTGTCGAAGTTGCGATCGCCGGAATGATTCTTCCTGCAATGAACTTCGCCTTCAGCTTGTCGACCTCTTGAATACCATAGTTCCTTGCACGCATATTTGCAAGCCCAGCAATTAAATCCATGTGGAAGTTTGTGTCATCATCCTTCTCAAACTGAATAGCCTTCATCTGGAATCCAGGAGGTAATTTTTTTGCAGATGCTTCCAGCTTGGTTAAAAGATCTTCAATAACAGAAGCATCATCAACAGAAGCACTAGAGATGTTAGAAGCTTTCTCATCTGTCTCAATCTTAACCCCACTCTTCGGTTCAAATTCAGGCACTACAACCTTACTAACAGCATCGACCAGATTACTTGTGTTCTTTGCCCAGTCGGGTATGGAGATCCCGAATGACACTGCTCTCAATATGGAAGCAGCCAGTATGAAGTGAATGTGAGATGAATTCACAGTAGAGAATTGCAGTGGGCGAGGAAACCGTTTGGGGGCAGACCAGAAAAAAGCACCCGTGCTAGTGACCGCATCTTCAGGAAATGTGAATGTTAGCTGCTTCACACGATTAGCGAAGTAGTCTTCAAATTTCAGTCTAGCCCAGGCAATGCAATCTTCAAATCCATCACATCGCTCCTTGTCAAGGCATTCACAAACACGCTCGAGCAATTCCCTTGCTTGAGCATCACCTGCCTTTCTCATAGCAGCAGCATATTGAGCTGGATTGGAAATAAAAGAGTTCACTTCATTTGGAGTTTTCTCTAGCAAACCCTCAAACTCTGAACGAGCCCATGTCAGACAGTGGTCAATATTGTGTGGGAAAGAGTGGACTGTGCACATTGGTGCCTGTTTCTCAGGAGGGTCTCGGGATGCTCCATAGTTTTCAGTAAGGTGAGGAATTACCATTTGTGTATTGCATTTTGGACCCAATGTTCCAGATTCCAAAAGTGGTTTCTGGAAGTACAAGCATCTCATATCCATGTACATCCTAGCATTAACATTATCAAGTGCATTGATGATGACATCAAGGCCCTCCCAGAATTTGTCATGGAACACATGCTCAGTCTCTGGACAGGCACGATTCTGAAGAGCATTAATATGCAGGCTGGAGTTGATAGCACTAGCCGCTGCAGCTGCTACAGTAGATTTAGCCTGCCCAATATTCCAATCACGAAACAGAAATTGGCGGCTCAAGTTGCTTTTCTCAATGATATCATCATCTGTTATAGTTAGCTTTCCTTTAAGGCCACAAGATACTCCCATTAAAGCAAGATTCTTCAAGAATTCACACCCAAGAGCACCAGATCCCACAACAAAAACATTGGCATCTCTCATCTTTTTCTGAAGCTTAGAACCAAAAACAGATATCTGAGCATCATAGCGGCTATTCAATGGTTTCAAGTCTTTTGAGTCCAATGGATAGGTTGGTAGAGATTCCGCTGAATCAAAATAAAAGAACTGGTATTGAGGATGAAATTTCCCAGAGCATGCCTTAACAACTTCTTGGCCGACAATGCCACCAAACATCGCAGCCATTGGGTTTAGAACAGCTCTAGAACCACTTGCAAAATTTCGTAACAACTTCCCATCAAGCTCATCCATCTTGTAATCAATTGTAGCTTCATTGACAGAAGCAACAAACTCAATAAACCTTTGAGCATCTTGGTCACAGCCAGCACCAGGAAAGCGCCCAAATTCTTTCCTGAACTTATCCAAAGCTAGAAATGCGAAGTGCAGAAGAGGAGGACGGTCAAACTTTGAGAAATCGCTCAAAAGGAAATTCCCTGGTTCTCTTATAGAATCTCTGAGACTCTTGAACTCTAAGTTGATCGGCTCTTTCACCTGAGTAACAATTCCACCTTTTGCATAAATACCAAATTTACTTGTATCCTCCTGGATGCAAAATGAATATGGCCTTGCATTTATTATCTTCCTTGGCTTGCCATCATTTAGTTCTGTCATCCCTTGGACCTCTGAGAAGACAACAAGATCACCATCTTGGAATTCAAGGCGCTCATCATCAACGCAGGATATCATTGCAGGATTGTCATTGCTGATGGATGCAATTATACCAGTATGTGGTTCTTCACCATCAACATCCAGAACGGTAAACTTAGGCCCAAAGTCACAAAATACACTACCAAAAAGACCACAAACTTCTGCTTTGATAAAAGAAATTGAAGGCTGGTGGTTACGACAATAATCATCAAATTCAAACGCCTTGTCTAGACTTATGTCAGTGAAAACAACAGCCTGAAACTTTGAGAGGTGTTCATTGGTCAGATCTTCTGTCAGAGTAGATATAAGAACAGCATTGTTGAGTTCTTGCAGCTTTGCAGTGCAAGCAACAGCCCTATTCTTTCCAATATCATCTTCAGATAGGAAGAAATTGCCTGATAAGTCCCACATTTCCACATTTCCCATATCATGTAGGGTGATAGACTTAACACCCGCTAAAGCAAGATTCTTCGCAATCTCAGCCCCAAGCCCGTTCAGTCCGGAGACGAGGACGTTGGACGCGAAGAGCCGCCGCATCGTCTCCCTCCCGTACACGGCGAGCTGCCTGCTGTGCAGGTCCTCGTCGATCTCCGCCACCTCGCTCCCATTGCCGCTCACCCCACCCCCACCGCCGCCCGCCTCCCCAGCCACCATCGCCTCCGCCTCCGACGCCGATGCCCCTACCCGCGCCTTCTTCGCCGGCGCGTCGCTGCTGCTCTCAGCCTCAGCGCCGTTCGCTCTCTTCGTCGGAAGCATATAGCGCGACGGACCACCTGCATCGATCGCCACCACCGAATCGAATCAAACATCCAAAAGAAAACTCAAAAAAAAAAACAAAACCCCCAGGAAGAACCAGGAAATGGCGATCGGAGCAGAGTACGGATCGAAGAACGGAGACCGATCCGGATGCGGGCGATCGGAAGGTGGCGGCTAGGGATTCGCTCCGCGCGGCGCCGCCACCCTGTGGATGGTTGTGCCTTGCCTCTTCCCTTCCCTTCCCTTCGGCTTGGATGCTATGCCGGCGGAGAAGAGTATATA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0208700.1 | 3 | 10299240 | G | A |
| Osa03LNT0208700.1 | 3 | 10300182 | C | A |
| Osa03LNT0208700.1 | 3 | 10301248 | A | G |
| Osa03LNT0208700.1 | 3 | 10301558 | G | C |
| Osa03LNT0208700.1 | 3 | 10301816 | T | C |
| Osa03LNT0208700.1 | 3 | 10302829 | T | C |
| Osa03LNT0208700.1 | 3 | 10303178 | T | C |
| Osa03LNT0208700.1 | 3 | 10304250 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0208700.1 | osa-miR5820 | Cleavage | 4.0 | 17.838 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR160a-3p | Cleavage | 4.5 | 12.856 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR160b-3p | Cleavage | 4.5 | 12.856 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR397b | Translation | 5.0 | 22.733 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR397b | Translation | 5.0 | 19.986 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR166i-3p | Translation | 5.0 | 24.264 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR1868 | Cleavage | 5.0 | 24.215 | 1 | 24 |
| Osa03LNT0208700.1 | osa-miR2091-5p | Cleavage | 5.0 | 23.192 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR2095-5p | Cleavage | 5.0 | 14.862 | 1 | 22 |
| Osa03LNT0208700.1 | osa-miR2097-3p | Translation | 3.5 | 11.154 | 1 | 22 |
| Osa03LNT0208700.1 | osa-miR2919 | Cleavage | 3.0 | 23.325 | 1 | 19 |
| Osa03LNT0208700.1 | osa-miR2929 | Cleavage | 4.0 | 20.343 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR5338 | Cleavage | 3.0 | 13.513 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR5338 | Cleavage | 5.0 | 15.035 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR5489 | Cleavage | 4.5 | 20.101 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR5499 | Cleavage | 3.5 | 23.59 | 1 | 21 |
| Osa03LNT0208700.1 | osa-miR5500 | Translation | 5.0 | 15.002 | 1 | 22 |
| Osa03LNT0208700.1 | osa-miR5501 | Translation | 4.5 | 8.901 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0208700.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0208700.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0208700.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0208700.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0208700.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0208700.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0208700.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0208700.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0208700.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0208700.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)