© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0209300.1
CGATAAACATTTTATCATTTTTATTGATGATTTACGGGGTCTATACACAACGAATAACACGGTAGTGCATTTTACACTACCAGCTTTATCTCTAACAAGGCCCTTGATGTTCCTTTTGTCGAATCGGTAATTGATTTTTCTTCACGAAGATCTAATGATCAGAAGCGTTAGTTAAGATCAACTTGTGCAAGCAAAACAATGCATTAAATAGTGTTAAGCTGTTGAGCATCTTGAAAACTACTTTAGTATTCCTCTAACAAAATTTTCCGCAGTAACACCTGTAGAATCATACTGTGGCTGCGAGGCAAATTCTGCTTGCACAAAAAGAAGCCTGTTAACTGGGCACTAACCATCAAGCACCACTCTACAATGATGAAAAGGTTTGTTCGATCCAATCAGATAGCCTCCGAATTTTTTTGGTCATATCAGTGCTCTTTGAGAAATAAGACTGGGCATTTGCAAGCATCACAGTCGCATCATGTCGAATAGCTTCCAGAGTTCTGTAGTAATTGTTCTCAAGCCTTATCCTAATCACCTCAATGGAAAACTGGACAGGAAACCTGTTAATGAAATCTGATTTCTCTGCAACACTGTTCAACTTCAGAACGCCATAGCGATCCTGTAAAACCTCAATAATTTATTGTTGGAGGTCAAAACAACAAAAATTGGGTAGCAAAAGAATGTAAAATTGATAAAGAATTCCACCTGATTTCTGTGAGACAATTCGAGTAAGTTGTCCAACTCTGATAGCAATTTGTCCTTTATACCAAGATCAATGTGTGGATGTTTCCATGGGACCCACAGATTACCAGTATCATGGAGTTCCCAGGGGCTATGTGGGTGATCAGAACCATCATTCTTATACTGGATAACATATTTCTCCCATGGACTCTCAGGAAAATCAAGTGATTTAGGTTTTACGGCTGATACCCTTCCTTCCCACCAACTTCCTCCTTCCTCTAACTCATTCCTCCACCAAACTTTGCACTTATCTCTGTTAGTCCAGTTCCGATCAATAGAAGCCTCAAACCGTGTTCTTTCCACAAGAAAATCTGGAAAATTAACTAGCTCTGGCAAGGTGATCATAAATGTTCTGCCAAATCCTCTTGAAGTATCATCAATAAATTCAATAGTTAATTTACAGCAGCTTTCACCAGACCCTCTGAATGTAGTGTAATCTAGACCTTGAATCTTGCAAAGTTCTACATCTTTAAGTCCTTTGATCCGATTCCATGGGCAATCATCCAATTGCCGAGATCCTTTAAGATATTCTTCATGGCCCTGCCTCAAGTACATAACCTCATCACCAAGTTGAGGAATATAACGGTAGCTATCTTCATGCTCTAGCAACATCAGCCATGAATACTTCATGGATACCTGCTTCCTTTTCTCCAATAGATGTGTACCAGGAAAGTTAGAACTCTCTCTTTTGTTCCTAGTAGACCTCAAACCAACAGTTTTCGAGTTTGATTTCCACATGACATCACGCACATCTGTAACAATACGCCTCCCACTAGTTGATGCTTCATGGGAACTATAAGAATTTTTAGCTTGAGTGGTATCATCAGTGTATGCATATGACCTCCTCGCGCTTCTTCGCAAAGTAGCACTATCAGGTTTAACAGGACTGTAATCTGTAGGTTGATAACCGTCATCATCATTGGATACGGAAGTGCTCTCCCCATTTCCATATGCATCTGAATCCAAATTTTTCTTGTGCTTATTTGTCTTTGATCTTTTGTAAACTGCACTATATGTCTTTGCAGGATCTAAGTGCCACTTTTTTGAATCATCCAGACTAGTGCTTTTATCTGTGCGTTCCGGCAAACTTTTCGACACAGTAAGGATGCCATCATTCGTATGTTGATTAAGGGCAGAACCCTCATCATGCAGCATATGACCTTTATCATGTTCAGAGTTCATGTCATTCCCTACTGCAGTAGTAATTCTTGATTTGTCTGATGAACCTGCTCCATCTGCAAAGCTTCTTGATCTGAATTTCAGCTTCAAGGATATAGTCTGGGGAGTACTATGGACTTGTTGGTCATGTTCCCCTTCATATCCTTCATCTACATGAGCATTATTATCACTGGCTATCCTTTCTTTGTCCAGCAAATTATCCTCACTACAATCATCAATTTTGTGGTTTTCCAGATTTACTGCATGTTGAATCTCTTGTGAATTCAGTTCAAACGTTTGCTGGATTTCATCACCATTGAGCATCTTCTTACTATCTGGTTGGTCAACATTCTGTGGAACAGAATTATTTGAAGTAGGCCATGTGTCTCCGGCTGAAGAGTCGCCAAACTTGAATCGCTTAGAAGACCGCACCTTTACCTCACCCCATTTGATTGTGCTGTTATTGTGAAGAGCAGAAACATCATGTGGATCAGAGATCTCAGTTTGCACTCCATCTGTTAGTTCAGCCTTTAATGCAGAGGAAGATCCCGGCTCAAAATTTGGTTTGGTCTCAACTGCTTCACGATTGGTTGGAGAAAGAGCCAACCCTTCTCTATCCTGAGTAGAGCACTCTGTTTTTCTGTTTCCCATAGTAAATTGAACTTTTAAATCACGGCGCGGTATCCTAAGGACCAGCTTCCTATTACTTCCAGAGTTTCCATGAGTTTCAGTGAACTGAGAAGGTTGTGTAACATCATCTAAGTCATACCTGGAATTACTCTCTCTACCAAGTCTTAGCTGGCCATTCCATGCTAAATGTTCAGCTTCTGTGCTTTCTGTGTTCAGCTCACTGTCTGAGAAACTGCTCTCAGAGTCATCTTCATCCTCTTCTGTTGAAGCTCCAATTTTTGAGAGAAAACTGAGGGCATTGCGAGCAGCACGTCTCTGAGGCCGCAATCCCTTAGATTTGGGGGATTTTTTCCTTTTGCTTGAACGATCATTCCTAGACTTCCTGCTTTTATGTGGCCTTGACACTTGAGGCACATCACGCTCGTCAAAATTTCTTTTCTTAACTCGACGACCAGATGAAGTAACCACACCCCCATCTGATTTTTTCTTTTTTCTTCTCGATCTGCGGAGAGCGCTATCAGTAAGGTTATCCCCATCAATTTCTCCACTTGAGTACGAAGCACCAGATGAATCACCATTCAAAGCCTCATGTTCCCCTTCACTAGAATGCTCATCCAGGCCATCGTACTCAGAATCAGTATCATCTGAAATAACCTCATTTTCTGGTTCAAGCTCAATGAAGTCTGTTATCTCTGGAAGTGGTTCCCACCTATCTGGATCAATAACTGGGATGATTTGATATTCACCAGTGGTTGCATTGTAAGTGGGACCGACAGCAAAATTCACGGAGGGAGGTCGCCACTCAATACCCAGGGTACCTAACCGTCGTTTCTGGTACATACTCTGGAAGGGCTCTGGATAGGGTATCATACCAGAGTCACACAGAAGGTCTTGCATATTTCTCCTATAAGGTGCAAGCTGTGTTTCCTGATCAATAACATTTCCATTCGTGTCTTGGATAAGAGGCCGGTAGTCTCCAAGGAAGAACTGATCATATTTCGCATCCTTCTGCGACTCTCCCTGCCCTGTACCAATAATGAATATTTGTCCAATTTCATCGGAGAGAATCAGTGATGTCCCATCCGGTGAGAACTTCCCATCAACTAACTTGAAATGCCCAGTTTCATATATCTGTACAGGCTTCCCTTCCCAAATATCCCATATGATTGTCTTTCCATCATACCCAGCACTCATAGCTATACGGGGGTTGAATGGATGCACATCAAGAACAAATGTTGATTCTTTATGCCCAATCAATGAATGTACCAAGCTCCCATCAGAAGCATTCCAAACACAAATTCTGCAATCCATGATAGCAGCAAGCACAAAGCGGTTATCCAAACTCCAAACAATCATATTAACACCACGAGGAGTAGGCTGGTATCTTTGACGTGGACCACCGCGAGGTGGTTGAGGAGCCATTGGAGGTGGAGGAACTTTAAGATGGTAAGCTCGTGTCCAACGTCCAACCTTTCCATGTGATCTCCGAGATCGTGGAACCCAGATAATTGCACTGCCATCACGGGAGCAGGTGACAATATTATGTGTGAACCAGGAGTTTCTTAGCTTAAGATTATTTTCTTCCTTAATGGTGTGAGTGGTGTCAACTGAAAAGGACCTAGAAGCCACCGCACACCCACTAAACTGCACATAGTTTACATCATTTTCATGGCCAGACAATAGATCCATCTCATGATTCGGCTGGTCATGTTCCTCAGAAGAACTCTTGCAAGCATTCCATACCCTTGCAAAGGTGTCTGAGCTACCAGTAACAAATACAGTTCCATTCGCATTGAACGCACAACATAAGATTTGGTGATTCGTTGGTTGAACTTGAACAGCACTAGAAGATGCATCACCACCCTTGCCAGGGGCAACATCTGGAGGTTTTGGTATATATATACGTGGAGATTGTTGAGATTGTCTGGCATCCCAAATCCTGCATGTCCCATCATCTGATGATGACAACAGCTGGAAAGCAGCACCGGGCCTTGGACTAAATGCAATGGCGGTTACAACCCCTGTATGCCCCTTCAGCACTGAGATAGGCAGGCCATCAGGTATACGCCAAACTCTAATAATGAAATCATTGGATGAAGATGCTACCACAGCATTATTGGAACTCACTGCGAGGTCAGTAATATCACCTTCATGACCTCGGCAGCTAGCCAGACAAAATGCTGTTTCCATTGCCCAAATTTTAACAAGGCGATCATCAGAACCAGTAATAACATAACGTCCCGTTCGATCAAAAGTAGCACAATACACAGCATTTTGATGTCCCCTTAATCTCTTTATAATCTGCATCTTTTCAACAAGGGTCGATGGCTTCGCAATGGCATAGCATGACGCGCGTACAGACGGAGCTCGGCGATGTTTAGTGAAACCGCCAATCTCTCTCAGACTTAAACCGCGAACTTGATCGGCTTGTATGTGTGGCCAACGGAGATAACGCAACAGCTTGGGATTTTCCTTTTCTTGCCTGCTTGTATCAGATGCAAGAAGGGAGAAGGAACTTGATCCAAGAAGCGTTGGGACATCAGCAGCATTTGGAGAAACCCCTCCAACCAAGCCATGTGGGTGGCAAGAACTAAAAATCAGCTGCTTTAAAAGCTTTACCAAGTGGTCTTTACCAATGTGGGGGTATCTCTCAACTAACTTTAGGTATCCCAAAGGGAGTGATATGCCATCATCATTTTCTTCACCGCTATGAAAACCACCTCGTGAATACCAAGCATGATATCTTCTAGGTAGCAGCTGATGTTCAAGGAGCTCATTGCAGAGTTCTCCAACAGTCCGCTTAAATGGACCATGTGATAAAAAATGCATGATGAGAAAGTAAACTTCCCTCATATCAACATCAACATCAGCCTCAGGTGGAACATCTGTTGCTACCACTGGATTGACAGAATTAACCTTCTCAAGTTCCTGACTTGGAAAATCCAGGGGCACCATACTAATGGAGGCCGCATTACCAGAAGGTTGGTGTTTTCTAAGAGCCATGTATACAGCACCAACAGCGCCAGAGGAGGAATCAGCCCGGATGCATCGCCCGTCCGTCCTCTCCCCCCCACACGCCGGCCCAGCGGAGACGAGGAGGGCGGGGTCCCCCGCCGCCTCCGAGGTCGCCGCGGCGTCGGTGCCCGCGCGCGCGCTTCCTCCTCGGGCGGTGGCGAAGGGAGGTGGGCTCGGCGGCGACGGGCTCGCGCGGGGGGTTGGGCCAAGGGGAGGAGAGGAGAGAGAGGGACGAGGGAGATGGGAGAGAAGGGGGGAGGGGGTGCGGTGCGGAAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0209300.1 | 3 | 10871057 | C | A |
| Osa03LNT0209300.1 | 3 | 10870022 | T | C |
| Osa03LNT0209300.1 | 3 | 10866577 | A | T |
| Osa03LNT0209300.1 | 3 | 10867266 | A | T |
| Osa03LNT0209300.1 | 3 | 10868324 | C | T |
| Osa03LNT0209300.1 | 3 | 10869272 | T | A |
| Osa03LNT0209300.1 | 3 | 10871580 | T | C |
| Osa03LNT0209300.1 | 3 | 10873708 | T | C |
| Osa03LNT0209300.1 | 3 | 10873875 | T | A |
| Osa03LNT0209300.1 | 3 | 10874239 | C | G |
| Osa03LNT0209300.1 | 3 | 10874646 | A | G |
| Osa03LNT0209300.1 | 3 | 10876708 | A | G |
| Osa03LNT0209300.1 | 3 | 10876758 | C | T |
| Osa03LNT0209300.1 | 3 | 10877033 | A | G |
| Osa03LNT0209300.1 | 3 | 10877986 | G | A |
| Osa03LNT0209300.1 | 3 | 10878793 | A | G |
| Osa03LNT0209300.1 | 3 | 10880270 | A | G |
| Osa03LNT0209300.1 | 3 | 10880339 | T | A |
| Osa03LNT0209300.1 | 3 | 10880420 | A | G |
| Osa03LNT0209300.1 | 3 | 10881523 | T | C |
| Osa03LNT0209300.1 | 3 | 10882421 | G | A |
| Osa03LNT0209300.1 | 3 | 10873276 | T | C |
| Osa03LNT0209300.1 | 3 | 10870654 | A | G |
| Osa03LNT0209300.1 | 3 | 10872029 | T | C |
| Osa03LNT0209300.1 | 3 | 10869244 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0209300.1 | osa-miR5791 | Translation | 4.5 | 10.432 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR812r | Cleavage | 5.0 | 18.501 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR5807 | Translation | 5.0 | 7.732 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR5807 | Cleavage | 5.0 | 13.134 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR5830 | Cleavage | 4.0 | 11.823 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR5836 | Cleavage | 3.5 | 20.832 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR1440b | Cleavage | 3.5 | 14.429 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR6252 | Translation | 5.0 | 7.697 | 1 | 23 |
| Osa03LNT0209300.1 | osa-miR6253 | Cleavage | 5.0 | 22.057 | 1 | 22 |
| Osa03LNT0209300.1 | osa-miR7692-5p | Cleavage | 3.5 | 14.043 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR7693-5p | Cleavage | 4.0 | 16.854 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR1861o | Translation | 4.0 | 12.686 | 1 | 22 |
| Osa03LNT0209300.1 | osa-miR1861o | Cleavage | 5.0 | 24.207 | 1 | 22 |
| Osa03LNT0209300.1 | osa-miR156a | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156b-5p | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156c-5p | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156d | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156e | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156f-5p | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156g-5p | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156h-5p | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156i | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156j-5p | Cleavage | 4.0 | 17.277 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR396a-3p | Translation | 4.5 | 9.427 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR396b-3p | Translation | 4.5 | 9.427 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR156l-5p | Cleavage | 3.5 | 17.277 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR166k-5p | Cleavage | 5.0 | 15.242 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR168a-5p | Cleavage | 5.0 | 15.605 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR166h-5p | Cleavage | 4.0 | 15.323 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR166j-5p | Translation | 4.0 | 14.145 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR435 | Cleavage | 4.5 | 20.206 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR528-5p | Cleavage | 4.0 | 18.442 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR529a | Cleavage | 3.0 | 3.818 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR810b.2 | Cleavage | 4.0 | 14.01 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR1850.3 | Translation | 4.5 | 20.294 | 1 | 22 |
| Osa03LNT0209300.1 | osa-miR1855 | Translation | 4.0 | 13.132 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR1857-5p | Cleavage | 4.0 | 13.551 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR1857-5p | Translation | 4.5 | 13.704 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR1861a | Translation | 4.0 | 12.686 | 1 | 22 |
| Osa03LNT0209300.1 | osa-miR1861a | Cleavage | 5.0 | 24.207 | 1 | 22 |
| Osa03LNT0209300.1 | osa-miR1861d | Translation | 5.0 | 12.686 | 1 | 22 |
| Osa03LNT0209300.1 | osa-miR1877 | Cleavage | 4.0 | 20.643 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR1879 | Translation | 5.0 | 5.865 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR1881 | Cleavage | 5.0 | 14.362 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR2098-5p | Translation | 4.5 | 17.022 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR2098-5p | Cleavage | 5.0 | 17.821 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR2099-3p | Translation | 4.0 | 21.484 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR2864.2 | Translation | 3.5 | 14.871 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR395x | Cleavage | 3.5 | 17.397 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR3979-5p | Translation | 4.5 | 13.99 | 1 | 20 |
| Osa03LNT0209300.1 | osa-miR5146 | Cleavage | 4.0 | 12.716 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR5152-5p | Translation | 3.5 | 13.28 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR5152-5p | Translation | 5.0 | 19.669 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR5156 | Cleavage | 4.5 | 12.363 | 1 | 24 |
| Osa03LNT0209300.1 | osa-miR5339 | Cleavage | 5.0 | 15.363 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR5490 | Cleavage | 5.0 | 15.14 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR5498 | Translation | 5.0 | 14.24 | 1 | 21 |
| Osa03LNT0209300.1 | osa-miR6255 | Cleavage | 5.0 | 18.444 | 1 | 22 |
| Osa03LNT0209300.1 | osa-miR5498 | Cleavage | 4.5 | 14.721 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0209300.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0209300.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0209300.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0209300.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0209300.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0209300.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0209300.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0209300.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0209300.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0209300.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0209300.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0209300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0209300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)