© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0209400.1
TTTCTAGCATCTTAACCACTACAACCCCAAAGCCGTTTCCTTGCAGGTCGCTGATTCTTGATGTCATCTACATCACAAGTCACGGCCAACGATTCTTTCCTGTCTTCATCTTCCTCCTTTTGGGTTGCAATAGACGCTTTGAACCTTTCACTTCTTTTCTGCATCTTTTTCATTACCTCAAGTATATGTTTATTATCACATTCCCCTGTAGCTCCGTTGCTGCAATCAGCGTCTTTTGATGTTGCATTAATCACCCCTCCCTGGCATGCTGAGCTTGCTTCTATCACTGATTTCAGTACTACTTTTCTTTGGTGGTTAGACTTGCTTCTGGAAGCAGTATCCTGATGGTCCTGTTCGATCAGTTCTCCCTCCTCAATCTCTTCATATTCTTGATTGTTGCTCACATGTTGCTGTTTTTGTTGTTCAGATTTCTCTGAGGCCTGATTGCGCGAGATACGGAAGGCTCTTGGTTTACGCACTTTCTGATGTATGTTCTTATGTTTGGAACCGTGCAAGTCACTGTCAGCAGGAAGACATCCCTCACTGTCACTTTCGACCACACGCCTTATCTCAATTCCTTGTCGCTTAAACTTTCTCTTCCTATGGATCAAGAGCATGTTATCTGTGTCCCTCGGCTGCAAATTCACGACTTCATGCCTTATCTTATCATAAATGTTTGGAATATTATTGCTATTTCTCATATCATTGGGACTACACATAGCTTCTACATCAATATCCTTTGGAGAATTGTGCATCTCAGCAACATAAAGATCTCTATCACTGATCATGGACCAACCATGCATCAATCTCCTTCCTTTTTGATATGATGAATTGAAACGATCTTTACGGTTCATGGAATGATCAGCATGAACCCTCCTCTTCACTGGTCGAATACATTGACCAGTCTCAGCAACAGAACCAGTGTACAAAGCAGGTTGCTGAATGTCGTCAACATCAAATACAGAATCATGCTGCCTTTTCTTTTCATAATATCCATCATGGTTGTATTTCATTTTACCATTTTGGATTCTTTCGTTATCAATGAATCTGTTTCTTGATCTCATAAAGGTCAAACTTGCAGCAGGCCCAGGCCAACCCTTCTCAGATTTCCTGTGGTTGTCATTTGCCTGATGAGACAACATAAGTTGGTCAGGATGTGTGAAATGATCAAACACAAGATGTTCAGAACGTCTGAAATGCTCATCACAGCTTTCTGCAGATTGACTTCTGCATCTGCGCCTATCCTCAGGATCCAGTACCTTGCCAAATCTGTAATCAGTGTAATGGAAAAATTCATCATCCCCATTGCGGTCATGTCTGATTTTTCTTGTTTCCTCGTATCGCCTTTCTCTGTACATATGTCCATCAATATCATCACAAACCTCAGCTTTTAGCATTGAATGGGATCCATGTAGATCATCATGGCGTTGCTGCCACCGCCTGGCGGAATAGCACCCCACAATATCTTCATCATCGTTGATTTCACGCCAAGATCGCCTATGTCTTTGATTATAATCAGCGCTGCATTGTTCATCATTTCTCAAAGCTGCTCTTCCCAGCGGTAAATACTCTTGCTTTTCGCACAATTGATTGTGAACTCGATAATTGGTGCCAAGGAAAGTTGAGCTAGATCTTTTATGCTTATGCTTTCGAGCATACCTACTAGAGTAGTTATCTGTTGTGTTTTCTTGTCTCTCAAAGAGGGCATGTTTTCCACCAGCTAAACTTTGCCTCTTCAGTTCTTTTTTTGCTCTATGTCCAGATTCATGGAGATGGTGATCACTTTGGCAGTTATTAAGAGATCGACTAGAAATGCATGCTCCAGCTTCATCCATCCTCTGACGTTTAGTTGCCTTGTGATATCTGTCATCAGCAGGAGAGGGGGTATATCTATGGCTCTCACCCTTGCTACTTTCTTGGTCTGATTTACTTGCATGACGGCAAAAATCTGATAAGACATGCTCATCCTTACGGTTGGTTTCCACATAAAAAGCATTGGAATTTGATTTTCCACGCTTCCTCTTAAAATGAAAATCTTCTGTTGATTCTTCAGAAAGCATGTCAGAATTATCAGGAGTAGAAGATTGAGCCCCTGCACAGGCAGAATCTCCTAGAACCGTTTTGCTCCTGGTACACTCTGAGGAACCTCTCTTGTGCACTTCTTTATCAACCACTCTGTCCACCACAGAGCTAGTTTCCTTCAGATATTCATCAACACCTGGATGGTTATTGGATGGCCCACATCTTTTGGTAGTGATGCATTTGTCATTTACTGTGGACCTGTCATCTGAACTGGAGCGGTTTGAGGGTGGGAACATCATGTTTACCTGTATCACATCAGAATCCCTTTGTCTTGGAGGCCACATATCTGCTGATGGAAGACGTTCATGCATACCACCTTCAACATGGATTGCTCTACCCTTTGGCTTAGCAATCCCATTTCCTTCTTTCAATACAGAATAAATCTCTGACTTTGGCACTGATTTACTCAATCCAAGATTGTAATGGAACTCCTGTTGCAATCCTGACAATTCATTTGCAAGTGTTCTGGTTCCATGCCTGAAGTGTTCCATGTCAAAACAATATTTTCTCCAGCTTTCTTCATCCAGACCGAAATTGAAGTAGTCCGTGAGATCCACACCATGCTGTCTCCAGGGCTTCTCTTGAAATGCTTCAATGTCTACGTCAAAAACTGTCCTGTTCCTTGGTAAGAAAAAATTGAATTCCTTTTGAAATGCATGCTGGTGGCTTCGATCACCTTGTCCTGTGATCGGTGCTGTTGTTTTCTCGAAAAGCCCCTTCCGGTGAAGCTCACCAAGCTTGCCCCGACCGCCATCAGTAGACAGGCCTTTCACACAGCTACCCGAAACCTCCCCTTCCTCGCTCCCCTCCTCGCATCGGCCAGCAGGAGGAGGAGGCGGCGGCGCGGCGCCATCCTCGTTGAGCACGATATGGAGGTCATCCTCGCTCTCCTCGTCGCTGCTGATGTAGCCCGCAGTCCCGTCGCCCAAGTCCACCGCCTCGTTCGCGTCGGCCTCCGTGTGGTGGGCTCCCGGCGCCTCGGCCTCGGCCTCGCCGTCGGTGGCCGGGTTGGAGCCTCCGCTCTCCCCGGCGGCGGCAAGCGCGGCCGCCACCTGGTCGTCGAGGTCCGCGTAGAGGTCCTCCACGTCGTCTTCATTCCCGGCGGCGGCGGCGGCGGCGGCGTCCTCTGGGTCGGCCATGGGGTAAAGCAGATGGATTACGAGCGACGCCGGAGTGGTGAGAGCTTGATTGCTGCTAAGCCATTGGTGATGCCGGCTGCCGCGAAAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0209400.1 | 3 | 10999864 | A | C |
| Osa03LNT0209400.1 | 3 | 11000549 | C | A |
| Osa03LNT0209400.1 | 3 | 11003071 | C | T |
| Osa03LNT0209400.1 | 3 | 11005026 | C | G |
| Osa03LNT0209400.1 | 3 | 11005612 | C | T |
| Osa03LNT0209400.1 | 3 | 11002588 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0209400.1 | osa-miR5528 | Cleavage | 4.5 | 15.635 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR5806 | Translation | 5.0 | 17.681 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR5813 | Translation | 5.0 | 21.724 | 1 | 22 |
| Osa03LNT0209400.1 | osa-miR5837.1 | Cleavage | 4.5 | 12.615 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR6252 | Cleavage | 4.0 | 15.448 | 1 | 23 |
| Osa03LNT0209400.1 | osa-miR6252 | Translation | 5.0 | 15.791 | 1 | 23 |
| Osa03LNT0209400.1 | osa-miR167a-5p | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR167b | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR167c-5p | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR396c-3p | Cleavage | 4.0 | 10.651 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR399d | Cleavage | 5.0 | 15.451 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR167d-5p | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR167e-5p | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR167f | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR167g | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR167h-5p | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR167i-5p | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR171c-5p | Translation | 4.0 | 18.163 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR172d-5p | Cleavage | 5.0 | 16.057 | 1 | 20 |
| Osa03LNT0209400.1 | osa-miR167j | Cleavage | 4.5 | 18.505 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR529a | Cleavage | 4.0 | 19.939 | 1 | 20 |
| Osa03LNT0209400.1 | osa-miR810a | Translation | 5.0 | 12.58 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR1423-5p | Translation | 3.5 | 15.864 | 1 | 24 |
| Osa03LNT0209400.1 | osa-miR1850.2 | Cleavage | 3.5 | 18.393 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR1428b | Translation | 4.0 | 12.821 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR1428c | Translation | 4.0 | 12.821 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR1428d | Translation | 4.0 | 12.821 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR1428e-3p | Translation | 4.0 | 12.821 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR2104 | Cleavage | 4.0 | 23.884 | 1 | 22 |
| Osa03LNT0209400.1 | osa-miR2104 | Cleavage | 5.0 | 19.291 | 1 | 22 |
| Osa03LNT0209400.1 | osa-miR2105 | Translation | 4.0 | 24.531 | 1 | 20 |
| Osa03LNT0209400.1 | osa-miR5498 | Cleavage | 5.0 | 17.856 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR160c-3p | Translation | 4.5 | 18.051 | 1 | 21 |
| Osa03LNT0209400.1 | osa-miR160e-3p | Cleavage | 5.0 | 18.051 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0209400.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0209400.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0209400.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0209400.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0209400.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0209400.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0209400.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0209400.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0209400.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0209400.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0209400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0209400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0209400.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)