© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0209700.1
ACCCAGCTTGCACCAAGCTAACAACGTTATTTCGAGAAGGGTCAAAAGAATAATATTCTTACATGTTTCCACTATCCTATTTCAAATCTCAATCTCAACGGGCCAAGAGGCCAAGAGAGAGAAGTTTCTATAGCCAACGAGCTCGCTTACATATGCATTTCAATTTTCAACGGCTATACAGGCATATATCTACTTCATTATATTCCCATTTGGGGTTTAATGCTACATGTTACACTCTCCCTGATCATTTTTTGTTCTGCATCCCGACTCCTTTTCACCATGTAACACTCATAAAAAACGAAGCTCAGGGTGAAACAATGGAAGTCTCCAAGCCGTGAAGGTAATCAAATCAGCTTTGCAGATGCCACATAAGGCCAACTATAGGACTTGCTAGTATCCTGCAACGCCAACTATAAGAAATGATAAAGAATATAGCGCCACTGAAATTGCAATTCCCGCCACAAAATTGTACGAGAGGCGCTTGTTGTCACGACTAGGCACAAATGCGATCTTCAAGGTGTTAGTCAACTCAAATAGCCTATGGGAGACTGCAACATATATAGCAGTTGTGAGCATGAAATTCAGCATTGGGTAATTTGGGATTATTGTCAATAGCCATTTAGGTTGCCCATTGGGCACTTTTGATCTGAGCCAAATATGGAACTGTGATATGTACGTTTCTAAGGTAATCTTTCCGAGCCAGGCAAATAGTGTGAGAGAGCAGCACCGGAATTCTTGAGTGAAGTTGCGTAAGCAGATGTACACAGTTATGGGGATCCAGGATGTATAGGGATGGTATTTGTTGTAGGTAATCTTGTCTAGCTTATAAATGTACTCGTACCACAAACAACCAGCCGTTAAAGCAATTGAAACTATCAAGGCCTTAATATAGAGTTTAGTTTTCGTTTCAGCTTCTTCAAGCTTCTCCATCCACTTCTCAACAGTTGGATGGTAATAAGCATAAATCATCCCCACAATCCATATGTAGCGATCCAGTCCAGATCGGAAATGCCACTCATGCAATCGAGGGAGATCAGGTTTAGATGGATCAGTATAGCCGAGAAGAAACGTGAATGGGCTCCAGACAATCTCGAAGACTCCTGGGATTTCCCATATCAGGATAACCACCAAAAAGCAGGCAACAAACTTTATAGCCATCACTGATCCAATCTCGTTATACTTATTTAGTATTCCAAGAGCACCATAAACCATAAGGGTAAAAAGTGTGTGCATAGGGCAAATATAATAGAGGGTGTAGTCATTATTTAGCACAATACAACAGAATGCCACGAAAAAATTGAGGCGCCACATCATCTGAGCAAATCGTGCAAGGCTGAAATCCTTCCGCACATAATAATAGGAGAAGTTACCAAATCCAGTCATCCAGACATATGCAGCAATGAACACACGAATTGCATTGTATATCTCTTTAGCATTGAAGTAGTGGTACATCAAAAACAGCACCTGCATCCAACCCTTCCATTCCTCAGTTTGGTGCCTATTCAGATACAGTATAGATTTCCCCGTGAATGACGACTTGTCTTGGTGGACCTTGAAAGAAGTCATAGCTGCTACGATAATAAGAAGAAAGTAAAGGAAAAGGAACATATCTCGGCTGTAATTCTTCGCAGACTCTCCCAGTAGATTTGTGCGATCACATATGTAAAAGTAAAGCAGATGACCTCCAAACTCAGATATTGCTCTCAACGTCAATCGATTCTCTAGAATAAGTGCCTGGTCCAACAAGAAAAGTCTGAACATTTGTGATGTGAGAGAAGCATAAACTGGCTTTTGCACTGGTGCTTGGACACCCTCCTCCAATAACATCACTTGATCCTCTCCTTTGTTTGAGCTAGAATCCATTACTGCTAAATTTACATCCGAGTGTCTAGCTTTAATAGAAGCAGCATTCTTCCTATAATAGAGAACCTCCGCATATGCCCAGGCGGTGAAAACCCAAAGAAATCCCAGAAGAGCAGAGACCTGGCCCGGCGTGAGGGAGGTCGAGGCGGCCATGGCGATCCCACCCGCGGACGCGATCGCCTCCGCCATTCTCTCTACAGCATCCGCCCCGCCTCCTTCCTGCGCCGCTCGGATCCAGCCGCGTACAGGAGCCGAGCAGAGAAGAGAAGAGAAGAAGAGAGGGAGAGGACGAAGAAAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0209700.1 | 3 | 11243370 | A | T |
| Osa03LNT0209700.1 | 3 | 11243371 | T | A |
| Osa03LNT0209700.1 | 3 | 11243974 | A | G |
| Osa03LNT0209700.1 | 3 | 11247123 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0209700.1 | osa-miR812q | Translation | 4.5 | 11.493 | 1 | 24 |
| Osa03LNT0209700.1 | osa-miR5791 | Translation | 4.5 | 13.611 | 1 | 21 |
| Osa03LNT0209700.1 | osa-miR160e-5p | Translation | 4.5 | 23.846 | 1 | 21 |
| Osa03LNT0209700.1 | osa-miR1861n | Cleavage | 4.5 | 18.106 | 1 | 22 |
| Osa03LNT0209700.1 | osa-miR1876 | Cleavage | 4.0 | 19.247 | 1 | 24 |
| Osa03LNT0209700.1 | osa-miR2867-5p | Translation | 5.0 | 16.47 | 1 | 22 |
| Osa03LNT0209700.1 | osa-miR2873b | Cleavage | 5.0 | 15.749 | 1 | 21 |
| Osa03LNT0209700.1 | osa-miR5152-3p | Cleavage | 4.5 | 16.665 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0209700.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0209700.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0209700.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0209700.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0209700.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0209700.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0209700.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0209700.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0209700.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0209700.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0209700.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0209700.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0209700.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)