© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0210300.1
AAAGTACAGAGCGAAAATATATAGTACAAAACAAAAGGAACCAATGTTTACATTCTTAAAAAGACAGGGCAACAAAAAGATTCCGTTGCCGGGACTCGAACCCGGGTCTCTCGGGTGAGAGCCGAGTATCCTAACCAGCTAGACTACAACGGATGCTTGAGCGTGATGTTACAGGTATATTAAAGTTGTTTCTCAGCAATTCACGCAATGAGACAATGCTCATAGGCCCGGAGACGGTGAATACATGATAACATACACAACAAATACCAGGACTTTCACTGCTTCTGCAGACAGGCGAGCAGTATCTGTAGTTTATACTTATTCACAAATTTGGATTTCCCACACGGGAATTCCCCTAATGTCTATGCCATTACATTTCGCGCTGTATTCACATGCTTGAATGAAAGCTCGACTCCAATAGTGGGTATTTGTCTGTGTTGGTGTCCAGGAGGAGATCAAACGAGGTGAGGGAGTATGGATCCACAATGACACCCATCTTCTCGCCCGCGTTGGTTATGGGGCTTGCCGCCGGCACCACCTTGTCAGGCTGTTGGAAAGAGTTCTCATCCCGCAGCCAACCAGATGTAAGCACCGTCTTTATGGACCCGAATTCCTGAATGCCATTCTCTAGTCCAGCTACAGCTATATTAAGATTCACAGCTTTGTTACCAAAATTGACAACCTTTATTTTCAAGTAAGTGTTTCCATCGTTAGAATTCTGCCAAGTGAGAGCAGATGCGGCCAATTGATCATAGTTTGACACCTGAATTGTCAAGGGATGAAGTGTTGCACCACTTGAGTCCTTGAAGAAGTGTAGCATCCAGTAGTTTGGACATCCATAGTGCTGCCATGAGTTGAAGACTATGGCATCTGGACTAAACCCGCGATCGTTGTCATTTATGAAGAGTGGAGCACAACTTGCCATCTCGACCACATCACTGTTTCTTTCTAATCCAATGAGAAATGCAGCTTCTGCTAGAGCAGCTACTAATGTTCCTCGGCCAGCATCATTTCCAGTCACCGCATATTCACTAACAAATGCCTTGGGTCCACTGCGGGGTGTGCTATCAAACATTCTTGTTTTGGAAAACATATCACCAGATGATGTATAAACATGGACATCATATAGATCAGCAGGGTTGACTGCTGAAATGGAAGATATGTCACAGCTTGATATAATTTTGATGTCCGGGTAAGACGCTTTTATTGCAGAATAGAACTTCACGTATTTCTCTTTGTAGTACGGCTTTGAGCATTCTTGATTCCCTACTGAAATATAATAAAGCGGAAAGGGCTCTGGATGTCCCATTGCTGCACGAACTGAACCCCATGTAGTCTTAGGGTCTCCCCTAGCAAACTCAATGCCATCAACAACGTCCTTTACAAAAGCAGCTATTGTTGCAGATGGAATTTGTTCGTTAAGGCTGGCCCCATCATTGATCACCCAAACTGGGCAGGCATCAAGGTCTTCTGCCAATTGAAGGAACTCAAAAAAGCCTAGTCCATCATCAGTCCAATAATTCCAAACATCATTAAAGTGACCAGGTCTCTCTTCCCAAGGTCCAATGGTTTCACTCCACCGGAATGCGTTCAGTAAATAATTTCCCATGACATAGTTTCCACCTGGAAATTTTAAAAACCGAGGCTTCAGATTTGCCAGCATAGTGGCAAGATCTTTACGAAAACCATGCCCCATATAAGTGTCTGATGGCATAACTGATACTTGGTCAAACCAAATTATGCCATTTTTGGTGGTTGTAAGTTGCAGCCTTGAACTAGTATTTCTTTCACTTGACTGCAAATCAAACTCAACCTTTGTCCATCCTGCAAAATCTCCCTTCTCAGCCGTGATGGTATGAGTGGCTAGATTTTGAAGACCATCTGAACTTGTCAAAGAAACTGCCAAATCCACTGAATCTGATGACCTAATGTACATGCTAACTTTGTAGACCTTTGTTTTTTCAATGTTCATGCCCCAGTAACCAGGATTATAGATACCAACACCTCCTGAAGGGCAAGCATTAGTTCCGGTAGCTCCACAGAGTACTTCCATGCGAAGTGCAATTGGGTTACTGGCAAAACATGATGACCTATCTGTTTCCACAATTATATTTGACTCATCTCCAATTATCAACCATGGGTCAATATTTGAAGGAGTATTAATGCCACCAGCTTCGAAACCTCTGTTGCTTACAAGCTCTGCCCACAGTCCACCAGCCCCGGCATGGTTGAGCTCCTCAAAAAAGATGCCGAACATTTTGTCAGGGATCGTCCGACCATTCTGGGATGAAGCATCCACACTCAACTGTGCAGTTTGACCGGTAACCAGCCCAACAAAGAGCACCTGAGACAGGGCGCAAACGAGAACCAGCATGTGGAACAATGAGGAATCCAAACGACCTCTCCGAACGCCCATCCTGACCTGTCACAGCTTTTCGAGGGCCGCGGCGCCACCTCGTCAATGCCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0210300.1 | 3 | 11551310 | A | G |
| Osa03LNT0210300.1 | 3 | 11549799 | T | G |
| Osa03LNT0210300.1 | 3 | 11550159 | T | C |
| Osa03LNT0210300.1 | 3 | 11550323 | G | A |
| Osa03LNT0210300.1 | 3 | 11550898 | C | G |
| Osa03LNT0210300.1 | 3 | 11551528 | T | C |
| Osa03LNT0210300.1 | 3 | 11551617 | C | G |
| Osa03LNT0210300.1 | 3 | 11554152 | T | C |
| Osa03LNT0210300.1 | 3 | 11554341 | G | A |
| Osa03LNT0210300.1 | 3 | 11554618 | A | G |
| Osa03LNT0210300.1 | 3 | 11556809 | C | G |
| Osa03LNT0210300.1 | 3 | 11557565 | A | G |
| Osa03LNT0210300.1 | 3 | 11557616 | A | G |
| Osa03LNT0210300.1 | 3 | 11557807 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0210300.1 | osa-miR5536 | Translation | 3.5 | 17.198 | 1 | 22 |
| Osa03LNT0210300.1 | osa-miR6248 | Cleavage | 3.5 | 8.338 | 1 | 21 |
| Osa03LNT0210300.1 | osa-miR7693-5p | Cleavage | 5.0 | 12.921 | 1 | 24 |
| Osa03LNT0210300.1 | osa-miR396a-3p | Translation | 5.0 | 12.575 | 1 | 20 |
| Osa03LNT0210300.1 | osa-miR396b-3p | Translation | 5.0 | 12.575 | 1 | 20 |
| Osa03LNT0210300.1 | osa-miR172c | Cleavage | 4.0 | 10.605 | 1 | 21 |
| Osa03LNT0210300.1 | osa-miR435 | Cleavage | 3.5 | 21.114 | 1 | 20 |
| Osa03LNT0210300.1 | osa-miR2101-3p | Translation | 5.0 | 22.125 | 1 | 22 |
| Osa03LNT0210300.1 | osa-miR2864.2 | Translation | 4.0 | 4.053 | 1 | 21 |
| Osa03LNT0210300.1 | osa-miR2876-5p | Cleavage | 5.0 | 21.024 | 1 | 21 |
| Osa03LNT0210300.1 | osa-miR5149 | Cleavage | 4.5 | 19.698 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0210300.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0210300.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0210300.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0210300.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0210300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0210300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0210300.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0210300.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210300.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0210300.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0210300.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0210300.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0210300.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)