© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0210500.1
AAGAAAAGGGAAAACTCATATAATGATATACCCAGGATAAATACACATATTGTATCCCCCACCATCAGTTTAATTTTACCTAAACCTCAGATTTACACTTCTGCGGCATGGCATTGGCCAGAAATCTACAAGTATTCCTCTCCCACCTAAACCTATCTTGCAAACTGAACCCAAAAAGAAAAGTAACAGTAATTTATACCTATTGTTTAAACAGGCTAATATACACATGGGTGATCCACTTATCCACTTCTAAATGGCTTTGAGTTATTGTAGCCCATTCTTCCTTCCAGAAATTAGTTCCTTTGGTCTGACTTTGTCGAACTTATTCACTTTCCCATGTTCTTTAACTTCACATTCTCATATTGTTCCTTTGCTTTGTTAATGTCAACCGCGAGTTCCATATACTTCTTCAGTGAAACATCTGAAAACTCTGCAAACCCCTCTAGGAATGTCTCCAAACTTGACTGTAAATCCGTAGTATGGGAATTTCTGTGGATCTCTGACATTTCACCATTTAACTCTCCATTCCGAGAAAATGAGGAAATCGTCTTGGTACTACTGGAACGGGATAATGAGGAAGTCAACTTTGAAGTACCACGCCGCTTTTCTTGGCGAGGCACAGAGTGGTTTATATCTGCCACGAGGCCTTTGATAGCATCTTCCAAGTCCTTGGTTGGTAAATCATCCAATAACTTTATCCAGCTTTCACAGGTTTTAAACATGGGTGCAACAGCAAATTTAGTTATGGGAGTATCTGCTTCCTTCTTCCTCCTGGAGCTCTTCTTGCCCCTCAGTGGTTTCACACACTTAAGTAGCCATGAATTTAGGCTATGCAAGTACGATCTGTGGTATGCTATCCATTTCAGGAAGGTTGAATATAAAGTGTTTAGCTCAACCTGGAGGAGTAGAGCTGCTTGAAATTGTGACTCCGACCGAATTAAGACCTTCGTGTTGCCACTGCTGGACTTAATAATCTCACGTTGATGTTTGTGACACTCAAGCATTGTAGACCACATGCGAGTTAAACTCCCAATTAATTCCTCCAACTGTGGTTGAAGCTCTTTGTCCCTTAGATCCTCAATGTTCTTAGAGATCATGTCAATTCTCTGAATGGCCACTATAATTCTGGAGTGCAAATCCTTCACAGTAGCACGGGTTCTATCGATACTCATTTGGCTTTCAGCTTTTGATTCCTGGTGTCTCAATTGCCTACATTTTTCGTCATATTGCCTACAAATTGCACCGCTAGCCTGAAGACAATATAAAGGTTAGCATTTCAAACAAATCATCAAATTTGCCATCATTATATGATTTAACTATGTTTACAACATAGAAATTCACAGATTAAGGCAAACATACACGGATATAGCTTATTTATTCAAGAACATTAGTACAAAGGAATTAAGTGAAGGGAATAGGAATAAAAAGTGCAAAATGAACATATAAGTGGGCATCGGTAGTGAATTTTTTTATGGCTGTATTACGTAGGTACATAAGAAAATAATGTAACTGGCTCACACTACTTACATAATTGTCCTAAATAGCCTGAGTGGTTGCTGTGGAATGATTACAGTAGCACTTTGTGCAATTGCCATGTTGTATATAGTGAGTCGCAATCCTTCTATCAAATACATTCAGGTTTTCGTATGTCCCATTTATTACATATTCTAGGTAGGTTCTGTTTTAATTAGTTCAAAATCGATCTTATTTCCCTTTTTGCAAAAAAAAAAAAAAGGCTAGTTCCTATTTATTACATGTTCTAGGTAGGTTCTGTTTTAATTAGTTCAAAATCGATCTTATTTCCCTTTTTGCAAAAAAAAAAAGAAAAAAAAAGAAGGCTAGTTTCAATCCTAAAACACTTCATTGCTACCTCTCTACTTTACAATATTTCAAAAACTGGCTAGAACAGATAAACTAAAGTAAATATTTTAGTAACAAGACCAGCCAAAATACAAGTACCTTAACTTCATCATAAAGCTTTCTCTCCCATGCATATAATCTATCTAGTGTTGAAGCGTGACTGCCAGAATTCATGTATACACCACTAAAGATATTTCCAGTGAGACCATCAGCATCATCTTTTGAAGTCACCCCAAGAGGAATTCTAGATGATGAAGAGAGTGAAGAAACTGATCTGTGCCAGGTAAGGTACTTCACTTCAGCCTCAGGAGGAGGCTGAGGAATAGGAATTTCCTCCCCACCGCAGCAAGCAAAGAATGTCGCAAAGAAGCCTGATGCTTTTGATCCATGTGCTTTTTCTTCAGGCAGTAAAGGCCGGAAATTGACTTTATCTGCTTCAAGCATCCTTGGTACTTCTTTTCCAGAATCTGATGCCCTAATAAACAAGATTTCAATCTCTTTCATGCATGAATGCAAATCCTTCGCACCATTTCTAACGTCATGAAAAGGTTCTTTTGATTTCCCATTCATAGGAAGAGCAGCAATGGAAGATCTCACTTCTTTTACAGGGCTTGCCACAGGGCTTTCATCATCACTTTCAAACATGCTAATGTCTAGCACCTCCTTGTCATTGTTTGGCCTGTCAATTTGAGAATCACTATTCTCCTGTTTTCGAGAAAATGAATCACTATTCTCCTGTTTTCGAGAAAAAGAATCACTATTCTCCTGTTTTCGAGAAAAAGAATCACTATTCTCCTGTTTTCGAGAAAAAGAAACGCTATTCTCTGAAGCTAACTTTTCTGAAGCCACATGTTCAGGTGTCTGATTCATCACAGTATTTTCAACAGGCATATCATTGCGGTTCTGGAACACCCTCACTAAAGGTTCAGATGATGGATTATCGAAATCATCTTCTGACTCTGCAAAATCATCCTCCCTTCCATTGATAGGAGATTTTTCTGCATCTTTGAGATCTGAAGTTTTCTCATCACGGAAGCGCCTAACATTGTCAGGATGCACAGGAGTCTTCTCCCCTTCCTCTTCGAGCTCTGGAATTCCCTCCTTTTCCCGAAGACGCCTGATATCATCAGCGTTTTCAAAGTCATGACCAGGCTCCTTCTCGTCATGAAATGAAAATTGGTTCTCAACAGGGTTAAAAAGGCCAAAGTAGTCCCACGGTGGTGTCCCTGGAGGTGCTTCAAATGTGGAACTATCATCCAGGTCATGTACAGCTTTAGGAACAAGGGATGATGTTTGTAGAGTTGCTGTTACAGGAACAGGCACCTTCTCCTCAATGGTCATGACAGGGTTCCCCCCAGATTTCATATGATTGATACGGAACCGTCCGGAAGATAAAGGGGATGGAACTGGGGAGAAAGAGTCACTGGCCTGATGTGAAATAGATGGAGATAAGTTCCTCGATTTCTGCCGAATAGTAGGAGGTTCTGGTGTTGCAGATGTCGATGTGTACAGCGAAGAATCTGTTGGCACTTCAGGCTCCAAAAATTTTCTCAGAGCAAATCCTGTGTGTCTCAGTGATTGAATATAAGCGAAGTGAGCAGCTGCGAATGCACATCTTCCATCAAGTGCTTCTCTAACATATCGTTTTCTTTCGTGGCATAAGACAATGGCCTTGTCATCTTCATTCTTTGATCGTGTAGACCCCATTTTAAGGTGTATTGCACTGTGGTTACTACGCCCCGGCCGCGAACTGGAACGCAGCAGCGGGATCCCGGCGCTTGGCGCGCCCGCGCGGGGGGAGGCAGTGGTCGTGTCGCCGGCGTGGCAGCGCGTGGGAGGTGGCGAGGGGGAGGAGGAGGAGGAGGAGTGGAGAGGAGATGAGAAGCTTCGGAGAGATGATGAGCAGCAGCAGCAGCAGCAGCGGAGCGGTGCGGTGCGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0210500.1 | 3 | 11631299 | T | C |
| Osa03LNT0210500.1 | 3 | 11632081 | A | G |
| Osa03LNT0210500.1 | 3 | 11632237 | A | G |
| Osa03LNT0210500.1 | 3 | 11635346 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0210500.1 | osa-miR5806 | Translation | 4.0 | 17.53 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR2873c | Cleavage | 5.0 | 11.384 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR2873c | Cleavage | 5.0 | 15.497 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR6253 | Cleavage | 4.0 | 11.046 | 1 | 22 |
| Osa03LNT0210500.1 | osa-miR6255 | Translation | 4.5 | 9.941 | 1 | 22 |
| Osa03LNT0210500.1 | osa-miR395a | Cleavage | 5.0 | 14.322 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR397b | Translation | 4.0 | 13.723 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR168a-5p | Cleavage | 5.0 | 23.895 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR171f-5p | Cleavage | 4.0 | 12.111 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR418 | Cleavage | 5.0 | 10.413 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR396e-5p | Translation | 5.0 | 17.713 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR443 | Translation | 4.5 | 18.638 | 1 | 22 |
| Osa03LNT0210500.1 | osa-miR530-5p | Translation | 4.5 | 16.913 | 1 | 20 |
| Osa03LNT0210500.1 | osa-miR1850.3 | Cleavage | 4.5 | 15.581 | 1 | 22 |
| Osa03LNT0210500.1 | osa-miR1861e | Cleavage | 4.5 | 13.663 | 1 | 22 |
| Osa03LNT0210500.1 | osa-miR1861g | Cleavage | 4.0 | 13.663 | 1 | 22 |
| Osa03LNT0210500.1 | osa-miR1861k | Cleavage | 4.5 | 13.663 | 1 | 22 |
| Osa03LNT0210500.1 | osa-miR1861m | Cleavage | 4.5 | 13.663 | 1 | 22 |
| Osa03LNT0210500.1 | osa-miR2120 | Cleavage | 4.5 | 12.802 | 1 | 24 |
| Osa03LNT0210500.1 | osa-miR5144-5p | Cleavage | 4.5 | 17.868 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR5488 | Translation | 4.0 | 24.762 | 1 | 21 |
| Osa03LNT0210500.1 | osa-miR5489 | Translation | 5.0 | 20.598 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0210500.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0210500.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0210500.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0210500.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0210500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0210500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0210500.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0210500.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210500.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0210500.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0210500.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0210500.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0210500.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)