© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0210600.1
GGTGTTTGTATTCCCAAAAAAGAAAGGTGGCAATTAACATAATAGAGGACTAGATTTGACATAGCTATGATCGGAGGTGCCTCTGAGCATGTCATCCGTCGAGTACTCGTGTCTCTTACTAGATAATGCAACACATATTGCATTGGTATACAAGAAATCTAGAAAGCAGCAAACGCCCTATTCGGTATTCCATATTCACAAGTAAATGATCTCCTGTGTAAAATGGGGGGAAAGTAAAGCTGTTTGAAAAATGCAAGATTCTACAGCTACTTCTATGCAAATTTACTCCGATTCGAACAGCTTCGATGGCCGAGGGCTGCAGATGATGTCAGATGGCCTGCCGATACTGTCACGTAGTATCGAAATCTCACCCTCTTTAAGCAGTATTTCACCCTCCTTAAGCAGTATGTCTTCATCAAGAGATTTCATCTTCTGCTTTAATGAAGCAACATCATTTTGCAAGGCGCTGATAGTTTTTCGCAGCTGCTTCGTTTCCTGCCACAAGACATCCCTTTCATCACTTACTGTTTTGAGTGTGCACCGAAGAGCAGTCAATTCCTTCGAAGATTCCTGAAAATCCTGTTGGATCTGATTAATGTTCTCCTCTTTCTTCAAAACCTGCATTTCCAAATGTTTGGACTTGTGAGTGAGGCAACATAGTTCATCCTGAACCCTTTGGATTTCATTTTGCATGACATCTTGGATGCGAACTGAAGATGCTAGATCTGACTGCAATTGTTCAATGTCTCGTTCTCTTGACAATAACTTCTCCTTTAGTACTCTACAGAGCATAGACTCTTCTTTCAACTTAAATTCAATGTCATCCTTGGATAAGTGGTCCTGTTTCAAGATACAGCTTTCAGTTCTCTCTCCAATCTTTTCTTCTTCATTATGCTTTTCAGTCAACATAGATCTGATTGCCCGAAGACATTGTTTTAAATTCTTGATTCTTTCTTGTATGCTCTGGTAACTCAAAGTGTATTCAATGGATGCTAATGCATCAACACTTCCGAAACTCTCACTCCTCTTAGATTTCATTGAGTCCAACAACTTGGCACAAAGCTGACTAGTATCATCAAGCAACGATAAGCCCTGTAGTTGCAAGTTGTCCACTCTGGTGTTGAGCTCCTGTTCAAGACGAACTGAAGAAATACTTAATTTGTTATCACTGCTTTGTAGACGATTTAAAACAGCTATATTCTCTTCCCTTAGAGACTCAACTTCACGGTTACAGGACTGAATTTCTCTTCTCAGCTTTTGTTCCACTCCAGTAAGTCTGATAAGTTCCATTTGCATCCTGCTGATGCTTTCACTAGTACCAAGGGATTTGTTTTCCAGTTCAGCATTGAATCCCTGTCTCAGGCCAGTTATTGTTTTCTCCTGTTCATTAGATATCCTCTGCAACCTTGCAATCACTTTGTGTAATGCTTTATTGTCACCTCCCTTCTCTTTTAAGCATTCCAGGATTTGGTTCCTTTCCTCTGCAGTTTTCGTTAAATTATCATTCAACTCAACCGATGACTTCAAAAGAGTATCATGCTCTTTCTTTACTTTCTGTAGCTCGTCATTGAGCTGTTTGTTTTGCAGTTCTAAACTTGTTATCTTATTAGAAACATCAATTCTGTTCGATTCAAGTAAAGTAACTTCTCTTTGAAAAGATACATTCTGCTCTGCAAGCTCTCTTACTCTTTCCCGTAATCGCTGTTCTTCTGATTGGAATTCTGCCAGTTTGACTGACCAATCATTTGACCTTCTATCAAGCTCCATTTCCAAGGTACTTTGCACATCACTCTTCTCCTTCTCCAGCCTTCTAGTTCTGGTGTTCAATTCTACCTTGGACCGCTTATGTTGCTCTTTGGCTGCAAATCTCTCTGTAAGACGTGCCTTAATTTGTGAAGACAATTGGAGTGCCAATTGCCTTCTATCTTCAATCAAAGTCTGTATCAGCTGCAACATGTCAGTTGAGCTTAAACTATTATCCCTCAGCATGTTAAGCTCATTATTTTCTTCAAGAGGAACCATGAAGCACTCATCAAGTTCTTTAGCTCTTCTAAGCAACTTCTCATCAGTGTCTTGTTCAAGGTTATTACCATGAAAACCATGAGAGTCATCACGACAACAGACATCTGCATCAAAGCATCTTGAGGTAGTGCCTGAAATATAATCCATTGAAGTGTCACAAAAGCATGGAGGTTGTGCATCTTCCAAACGATCATAAATATCTTCCAATGTAGCAATACTTTGTGATTTGCACTCCTCTATATGTGAAAATTTTTCAGAAGATGCTTCAAGCATTTGTGCATCATCTCCAGGCTCTGCACACACAGATGCAACCTTCCATATGCCCTTTGTTTCCTCCTGAGCTAATTGGCAGGCATCAATCATGTCGATGTTTGAGTAGCTATAGCTCTCAACGATTTCTTTGCAAGACTTTGGTGAAGATGGAGCTGTAGAATGGGGTCTAGGTGGCCGTCCCCGTCCCAAATAAGATGATGAGGATCTGACAGGTAATTTTAGCTTATGTTTCTCATTTAGACTGTTTGACTCTTGCTCTCCATCAATATATAGATCTAGAACTTCATTCTTGCTTGAAAGATTGGTCAATTTAGAAGGCCTGCATTTTAACACAACAGGAGAACTAACAGGAGAGTGTCCTGCTGAGCATGAGTAGCATCTTGACTGAGGTGAATCACTTTCCTGTACCCCATGTGTTTTTGGAACCTCTATCGTGTATTCTCCCATATTGGTGTGTCTTTCTTGTGACCAGGGATAGTACTCCGCATCCCCAATGTGTCGAGGCACATCAGAACTATTGGAGAAAGAGCATGGAATATCGCCTGAAAAGTTCATTGTCCGTTCATTCAAGGAACGATCAATTGCTGACGACGTCAATGACATGCACCTCCTGAGCTGAGGAGTGGATGATTCCTCACTGCTTGGTTTTCCATGCCGGCTTCTTGACCTGAATGCCCGTGTGTCAGGAGAATGGGAGGCACAGCTAGTCCCTCCATCCAGTTTGTTCTCATTCTTCTTATCATGTCCCGCTGATGCTTTGCCATTCCCAGCATTACTTGTGAATGAGCGGAACGGAAAGAACCTTCTCATCTTCAGGAGCGTCTAATAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0210600.1 | 3 | 11660860 | G | A |
| Osa03LNT0210600.1 | 3 | 11661206 | A | G |
| Osa03LNT0210600.1 | 3 | 11661594 | T | C |
| Osa03LNT0210600.1 | 3 | 11662055 | C | T |
| Osa03LNT0210600.1 | 3 | 11662859 | A | T |
| Osa03LNT0210600.1 | 3 | 11663138 | T | C |
| Osa03LNT0210600.1 | 3 | 11663408 | A | G |
| Osa03LNT0210600.1 | 3 | 11663739 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0210600.1 | osa-miR5535 | Cleavage | 4.0 | 20.618 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR5804 | Translation | 4.5 | 8.812 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR5806 | Cleavage | 5.0 | 7.635 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR1437b-5p | Cleavage | 4.0 | 9.502 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR1861o | Translation | 4.5 | 14.756 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR319a-5p | Cleavage | 5.0 | 14.495 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR160f-3p | Translation | 4.0 | 18.172 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR171b | Translation | 4.0 | 15.241 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR171c-3p | Translation | 4.0 | 15.241 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR171d-3p | Translation | 4.0 | 15.241 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR171e-3p | Translation | 4.0 | 15.241 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR171f-3p | Translation | 4.0 | 15.241 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR166i-5p | Cleavage | 5.0 | 18.524 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR1428a-5p | Translation | 4.0 | 16.678 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR1861a | Translation | 4.5 | 14.756 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR1861d | Translation | 5.0 | 15.123 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR1861d | Translation | 5.0 | 17.103 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR1861e | Cleavage | 5.0 | 15.123 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR1861g | Cleavage | 5.0 | 15.123 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR1861h | Translation | 5.0 | 15.123 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR1861j | Translation | 5.0 | 15.123 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR1861k | Cleavage | 5.0 | 15.123 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR1861m | Cleavage | 5.0 | 15.123 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR2095-5p | Translation | 4.5 | 9.695 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR2865 | Translation | 5.0 | 14.124 | 1 | 22 |
| Osa03LNT0210600.1 | osa-miR5338 | Cleavage | 4.5 | 20.034 | 1 | 21 |
| Osa03LNT0210600.1 | osa-miR5522 | Translation | 4.5 | 12.93 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0210600.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0210600.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0210600.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0210600.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0210600.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0210600.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0210600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0210600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0210600.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0210600.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210600.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210600.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210600.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0210600.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0210600.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)