© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0210800.1
AAATTAAGGGCAGAAACACAATTGCCTCAAAGAGAAAAGAGAAAAGCTATGGTCTGTATACAGACTCCCAACACTGCTGTTCTGGTTCACTTTCTTCGGACACAAGTTTAATACTACAGCACAAGAACTTGAAACACTTTTACAACCTACACACATATAGCCAGAGCCAACCTACCCACCTACACAAACAACAGTTCACACGTGCTGTTCATTTGAATAGCACCGCCGGCGCCGAGAACAAGGAGGCTAATAAGCGGAGAACAAAACAGCCACGCGCACTCAACTCTCAACTCCTCAAGAGGTGATATATTCCTCCTCATCTTTACGAAGGAAAAAGGAGCCGGCGTCGCGATTCCTTTCAGCTTTGTCAGCATCACTTTCCCTTACTCCTCCTTCCGGGATCGCGTGCCTGCCTAAAGGAATAAGGATAATATCTCTTTTCAGTTGATGCAAAGATTGGGTCAGGCTTGAGTGTTTGTTCCAACGATTCGAAATTCTCTGCTCACTTGCCTGCCTTATAAGACCAGTCTCTGCATAATATCATGAACTACCCCTGATTACCAGAAACAGAGGGCTGATAAAACATCACCAGGCGGTTCCTCACAGGGGGGTTGTGCAGTCATAAAGCTCAATACTGAACTTCCTTTCCATTTTGTCAGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCGGTGGGCTGCGCGACGGCATCGATCTCCCGGCGAGGAATCTCCCAGCGGCGGCGTCGAGCTCCATGGTGAGGTAGCAAGTGGCCCCTCCCCTAGCTCGCCGCCCCTACACAGCCGCCTCCTCCGCTACCCTGGGAGGGAGAGCCGCCGCGCCGCCGCCGGTGTTGCATTTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0210800.1 | 3 | 11837265 | C | G |
| Osa03LNT0210800.1 | 3 | 11839716 | G | T |
| Osa03LNT0210800.1 | 3 | 11841745 | C | T |
| Osa03LNT0210800.1 | 3 | 11841743 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0210800.1 | osa-miR156a | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156b-5p | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156c-5p | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156d | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156e | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156f-5p | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156g-5p | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156h-5p | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156i | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR156j-5p | Cleavage | 5.0 | 16.755 | 1 | 20 |
| Osa03LNT0210800.1 | osa-miR5523 | Translation | 3.5 | 17.637 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0210800.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0210800.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0210800.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0210800.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0210800.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0210800.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0210800.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0210800.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210800.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210800.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0210800.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0210800.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0210800.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0210800.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0210800.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)