© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0211100.1
CACACCTCGCGCAGGAATCTCTTAATGTATGAATCAGTTCAGTTCCCACCGAATTCAGTAAATAAATGCCACATTACATAGGCCTCAATTGTTTCCAAACCCAACATTTTCAGACCGCAGAACAGAACCGCTACAAGGTTCTGTACAAGTTTATCTTGCACCATATTGAACGAGGATGCTCTTCAGCCCACAATCTACAATCTTCACTCTTCTGTACAGTGTACATGCGCCCAGTTCCTTCCACATATTTTACCATTTAGGGCCCGTTTAGTTCCCCAAAAATTTTTCCCAAAAAGATCACATCGAATCTTTAGACACATACACGAAGCATTAAATATAGATAAAATGAAAAACTAATTGCACAGTTATGGGGAAATAGCGAGACGAATCTTTTAAGCCTAATTAGTCCGTGATTAGCCATTAAGTGCTACAGTAACCCACATGTGCTAATGACGGCTTAATTAGTCTCAAAAGATTCGTCTCGCGGTTTCCAGGCGAGTTCTAAAATTAGTTTTTTCATTTGTGTCCGAAAACCCCTTCCGACATCCGGTCAAACGTCTGATGTGACACCCAAAAATTTCCTTTTCCCCAACTAAACACACCCTTACAGGTGCAACACGGCCGAAAAACATTGTTGTCCGTCAGACTGAAACAATCAGTGCCATTCCCCACCAAACGTCTGAAGAAATACTCAAGAGTTTTGGTCTCCATTTGCTAGTCCCTATTGACTTAAAAGTGCATTCAGTATCTGAAAGAATGCAACCCTCCTAGGAAGATTTGTTAGCCGCAGGGTTTCTGCCAAACTGTATAATCATTGGTTTGCCTTTGAACACAAAACCATGTACAAGATTCAGTGCGCGTTGAGCAAGTTCAACCGATGGAAATGTCACAAAAGCTTGGCCCCGCATCCGCCCCTCCTGCATTAGTTTGATGCTCAGACTAGATCGTGCAATGTCCATGTTTTCAAAAACAGACCCAAAGACATAGTAGAAGTCATCCTGAATGACATCCTTTGCCAAGTTTTTTATGTATAACACACTGGCAGGATTCCCTGGTGTGTAATTCTTGAACATAGGAAGGGACAAAATCTCCTCTGGCGGCAATTTCTCTTTTTCTATATCCTGAGGTGTGACAAAATGTTTTCCTTGAAGTTGTTCAGCTGTTGGCACCAATTCTTTGTCAGTAGTACTTTGAACAGTAAGCTCCTTCTGTGCAGCCTTTGGGGCAATATTAATCTGCAGAACTGGATTTTTCTTTTTTATCACTTGAAGCTCACTAGAAACTAATGCAGCAGGTTTCACCCCGACTGCTTCATGAGCAATACTTTTATCAACTGCAGGACCAACAATAGCTTCATGCTTTGTGCGCTTAACTTTCCTTTTATCAACATCCTCATCAGAAGATTCCAACTCAGACTCATCACTAGACAGATCTGTCAAATGAGGTTTATTTGCTGCAGACGGCTGTGGAGGTGGTGGTGGTGGTGGTGGAGCAGGCACTTGTGATGGTAGAGGTGGAGTAGGCAACGCCATCCGAAATGGAGCTGGAAGATTCATCTTATTCATCAAATGCAACACCTGGGTGTAAAATCGGGGAACAGCAATTAGAGCATTGACTATATTTGTCAATATGTTTCCATCTGGTGGAGGATACGCGTACTCGAGGTGCGGAGGAAATGGATAATCCACCCCAAGCCTAGGCGCAATTGGTTCAGCAGAAGATATGGGATTCTTCTGGTTTAAGGAATTCATACTTGGCACTTGCAATGCCCCTTGTGCTTCATGCTCCTGTTGCTTCTCGTTAGCATTCTTTGAATTTGGCTGGTTCGCTCTCTCGACTATCAGCACTTTCCCAAGGAACCTCAACCTGTTCAGCAGAGACTGTGCCTGACTGGCCACTACCTCGTCCCTAAAATCTACGAATGCGCAATTCCTCAACTTTCCACCGGCGCAGGGGCGGACGGATGTGGCGCCGTAGTGGGAGAAGAGGCGGGAGAGCATCTCCTGCGGGATGGCCTCTGGAAGGTGCCGCACCAGGAGCGTCGCTGCCGGCGGAGCAGATCCAGGCGGCTGCTGCTGCTGCTGCTGCGGCGGCGGCGGCGGCGCTAGTGATGGAGTAGCGGGCGCGGGACGAACGTGCGGAGGCGGCGGCGGCGGCGGGAACGATGCCATCGGAGTCGTACCGGGGCTCGGTGTCGATTCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0211100.1 | 3 | 11925066 | C | T |
| Osa03LNT0211100.1 | 3 | 11927250 | C | G |
| Osa03LNT0211100.1 | 3 | 11927332 | T | G |
| Osa03LNT0211100.1 | 3 | 11925101 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0211100.1 | osa-miR6245 | Cleavage | 5.0 | 23.132 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR395c | Translation | 4.5 | 12.412 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR395u | Translation | 4.5 | 15.213 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR169d | Translation | 5.0 | 14.531 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 13.952 | 1 | 22 |
| Osa03LNT0211100.1 | osa-miR1441 | Cleavage | 2.0 | 16.744 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR1850.1 | Cleavage | 3.0 | 17.291 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR1854-5p | Translation | 3.5 | 10.678 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR1854-5p | Translation | 4.5 | 12.406 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR1866-5p | Translation | 4.0 | 11.647 | 1 | 24 |
| Osa03LNT0211100.1 | osa-miR1879 | Cleavage | 5.0 | 7.473 | 1 | 24 |
| Osa03LNT0211100.1 | osa-miR1320-5p | Cleavage | 5.0 | 16.794 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR2055 | Cleavage | 3.5 | 16.197 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR2863a | Cleavage | 4.5 | 18.109 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR5497 | Translation | 4.5 | 11.749 | 1 | 21 |
| Osa03LNT0211100.1 | osa-miR1879 | Translation | 5.0 | 12.129 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0211100.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0211100.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0211100.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0211100.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0211100.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0211100.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0211100.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0211100.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0211100.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0211100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0211100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0211100.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0211100.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0211100.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0211100.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)