© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0211600.1
ACGTCAAGGTGTAGGCGGCCAAACAAATAGAATCGAAAATGGACAACAAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAACTATATGCTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTGCTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATATCCTGGTAGGGATCCACACCAAATCCATCCACAAGTAACGTGTACTGGTAGACTAGATCCATGCAAAGGTATGGAACGTTCTCCTCTGAAACATCCGGGTAGGTGGCCTGTGCATCCTTCACATTCAGTTTACAAACACGTCGTGCAGCTTCTTCGAAGTCTGAGGGTTTAACCTTAGCAAATGGTGCCTTCGGGTTTACAAAACCGGCCTCAGCAGCCCGATCGAAGAAAAATGATGCAACAAAAAGATTCTTCTGCCCATCTCCTCCACCACCATTCCACACACCACCAAATGTACATTTCATGTGAGTGCATGCTGGTTCGTCAACTTTGAGAGCTCTCACAGCAACAGCCCTGCACTTGGAATAACTTGCACCAGATGACAAACCTGATGCTTCGAATATATCGTCACCATATCTGTATTGTCCATGATGTCCTTCCAACATACAGTTGCGGTAATCATTGCCTTCACCTGCTTTTAAGATCTCTGCTCTAGCCGCCAGCAATCCATAACGCAAATAACTGTGAACATAAAGATAATATGTTGTTCCCTTAAGTAGAAGCTCCTTCACATATGAATCTTCACCTTCTGCAACTGGAGGAGCCTTTCCTGCATCCTTCTCTGAGATGGCATAAGCCATTTGGACAGAACCACCACCTAGATCAACCACTCCAACCGTGTGTGAGTAAGGCTTTCCCAAATTTCCCAACAGATAATTGATGGTAACCCACTGGAATGCACCTTCCTGAGATCCATCTAGAACGGTAACCCATTCTGGTTGGGATCTGAAAGAGCTCTTGTCTTGAAGAAGATCCCTTACCGCTTGCAAAATTTCTTCAGACTTTTCAGTCCCTAATGCTCTCAGGCCTGCAGTAGCCCCAACCCTGACAGGAGTTTGCTCACGTAATTCCACAGGAATTACTTTTTCAGCTTCCTCTAGAAGAGAAACAAGTGACTTAGCAGCTTCTTGTGGGTCCATGGCATAGGCACTGAGGCCTGGTTTTTTCTGCTTGAACAGCTCGATTTCCTTTCCAATAGGCAGCAGATCCAGGTTCCCATCGAAGCAGTACACGTGCACGCGGCTCCCGGAGCTCCCGGCATCAAATATCACAGCGTACCTGGTGGATCCGTCCCCAAGTCCGCTGACGGCCCGGGGGCCCCACCTCCGTCCGGCAGCGGCGACGAGCTCACCGGCAGAGCCCTCGACGGTAGCGGAGGCGGGCGCGCGAGGCATGAGAAGGAGCACGAGCGAGATGAGGAGCACCGGCGCGAGCACCACGACGAGGACCCCGCGGAAGCGGAGGACGCGGTCGGACACGGCCTCCCCCTGCTGCTGCTGCTGCCGCGCCCCGGCGGCGGCCGAGAAGCGGCGCATCCTCGCGGCATCCGCGGCGGAGGGGCCGGCGGCGGCGGCGAGGTCATCGGCCGGGAGTAGGTCGGCCGCCGAGGGCGAGCGGTAGCGGATGCGGCCGTTGGTCGGGGACGGCTTCACCGCCTCCTGCTGCGGCGGCTCCAGGGCGGCGGGTCGGGTGCGGCCGCGGCGCGCGGCCTCGGCCTCGTGGGGGCGCGTGGCTGGAGGTGCGGCTGCGCGAGATCTCCCCCGTCGCGGCTCACGGCGACCGGCGGTGCGCTCGGCGCCGGGGCGGCATTGCGTGCGGTGCGAGCGATCGGAGCGGCGAGGTAGGCGGATCGGTGGTGGTTCGATCAGGGAGGACGGATTCGTGGTGGAGTCGCGCGCGCCGCTCGGGGAGAGCGAGACCGGGACGGATCGGACGGTGCGGTTCGGCTCGGGAGTCGGGACGAGGTGGTTTGTCTCGCTCGCTCGCGTCGCGTCTCCGGGGACGGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0211600.1 | 3 | 12022337 | A | G |
| Osa03LNT0211600.1 | 3 | 12023484 | C | T |
| Osa03LNT0211600.1 | 3 | 12026747 | T | C |
| Osa03LNT0211600.1 | 3 | 12026881 | A | G |
| Osa03LNT0211600.1 | 3 | 12027124 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0211600.1 | osa-miR5830 | Translation | 4.0 | 12.952 | 1 | 24 |
| Osa03LNT0211600.1 | osa-miR5837.1 | Translation | 5.0 | 13.912 | 1 | 21 |
| Osa03LNT0211600.1 | osa-miR166a-5p | Cleavage | 5.0 | 13.114 | 1 | 21 |
| Osa03LNT0211600.1 | osa-miR166e-5p | Cleavage | 5.0 | 13.114 | 1 | 21 |
| Osa03LNT0211600.1 | osa-miR166k-5p | Cleavage | 3.5 | 13.114 | 1 | 21 |
| Osa03LNT0211600.1 | osa-miR166l-5p | Cleavage | 3.5 | 13.114 | 1 | 21 |
| Osa03LNT0211600.1 | osa-miR169f.2 | Cleavage | 4.0 | 24.103 | 1 | 21 |
| Osa03LNT0211600.1 | osa-miR1428a-5p | Cleavage | 4.0 | 22.144 | 1 | 21 |
| Osa03LNT0211600.1 | osa-miR1850.2 | Cleavage | 5.0 | 13.826 | 1 | 21 |
| Osa03LNT0211600.1 | osa-miR2878-3p | Cleavage | 5.0 | 15.15 | 1 | 24 |
| Osa03LNT0211600.1 | osa-miR5072 | Translation | 3.5 | 23.443 | 1 | 22 |
| Osa03LNT0211600.1 | osa-miR5159 | Cleavage | 4.0 | 23.166 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0211600.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0211600.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0211600.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0211600.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0211600.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0211600.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0211600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0211600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0211600.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0211600.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0211600.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0211600.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0211600.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0211600.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0211600.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)