© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0211800.1
GCTGTCGGTGCTGAAACTGTCCCAGGAGAGCTTTTAGTTTTCTGTGCAGTAGTTGCTTTAGTCAAAGATCCACCTGACCATGAACTGCGGGTCACAGGTGCAGGTGATGGTTTGGGTGAGCTCTTTCTGGCAGGCGCTTTTGGGGTCAATTCTTTTGGTAGGACCGGAGGTGATGAATTTCTCCGTGCCCTTTGTGGAACTGGAGAATTGCGTTTCTCAGCTGCAGTGCCAGTTTTGGGGGTAATTGCTGCCTTCTTCTGCCCAACTGTTTCCTTCAAGGGCCTAGTGCTTGCCTCCTTTGCTGGCCGCCTTCCACCTTTATCGGTTCGAACTTTCGAGTCTCGCTTCTCTTTATGCTGACCTTGCAGTCCACCTTTCTTCTCATTTGTGGAAGTGATGCCAGTAGTGGTGACATTAGCACTCGAAAACTTTCCAGGCATGACTTGCATCATTTTCATTAACATCTGATTAAGCTCAGCTTCCTTCTGGCGGTTCCACTCAGCAGAGGCCATTGCCCGATCACTGTTTTCCTCTTGCCCTGACTTTGTCTGCTCAGCAGAAATTTCAGTATGGGATGAAACCGCTGTCTCTGTTTCTGGCATTGCAACACCTTGCATATTAGTGTGAAAACCTTCAACAGAAGGCGTAACAACAGTGTTAGAAGCTGAAGCTGAACCTGGCTCAGCCTGTGTTTCAGCTCCATCCTTCTCTGAATCGGATCCTGTATTGTTGGATTTACTTTGGGATGTGGAATCTATGGTTTTTTCTTCTGAATTATTGTTCAAGGAATCACCCATTCCTGCACTCCACCTTCTTAGTACTGACTTTGTAGCAAACAAGCCAGCTTTCTTATTTTGCGAATCCGGATTCTGATCCTTCTGCTTGCTTTCGAAGAGATTTATTGCATCCTGCACACTCATCCTTCTTACATTATTGTCAGATTTCCTTGAAGGCTGGTCAGTTTCACCATTGCAACTGCCACTTTCATCATCTTTATCCAAAGGAATTCTTTGACTAGGGGGGAAATAGCTGAGACTCTTGATGGCAATCGCTGTTGACCTACGAGATCCTGATCTACCAATTTGAACCCTTCGCATTGGAGAAGCAGATCTCCTAGGTGAAGCAGACCTCATGAGTGGCCGGCTTCTTTCAACGACAGCCTCATCTTCAGCACTGGACTCAGAAGAATCATCACTTTCAGTTGAGCTTTCACGCTCAATTTGAGCAAGCTTTGCTGGGGAAACATTGTTGGTAATAGGCCTCTGGATAATGGTATGAGAGCTGATATTACGAGTATGAAGTGCATTTTCTCCCTTGTCATCTTTCTCGGCAGGGAAAGACTGCTGTTGGGAGACCTCAGAGGGTTGGCAGTCTGGGATCAACAGTAGGCACCGCATCAACCAGCTGAACTCTGATGCACCGAAGTGCTGAACAAATGAGGATAAATCAGATACATCTCTAGTTGACATATTGGAAACGACTGCTCTATTCAACAACGCAAAGATCTCCTCTTTCAGTACAGTCAACCTCAAATCCAGAGCTCGAAGCAATTCATTCTTTGTTGCTTCAGATGAGTTTGGGCCAACATTTCCCTGTTGTTCTACGCCAATGGTACCAAAGACACCTCCTGCAAAGATGATTAAATATTGCAATAAAGTGAGCATAAAATTTTAAGGGCCATTGAAGCTTGATACAATAATTAGAGAATTCAACTAAAATTCCCCTACTCAAACAAATAGCTTCTAACAGAAAATCCTCTGCCCTTGTTAAGAGACTTCCTAAAGGAAGGTATGCTTTATCAACATACTACAATAAATTAACACTTTTGAGTACTTGTTGAGGACCTTGAGGCATACATGGTTACTTTAGATTGCAAATGTACCGACAACAAATTAACAGAATCTTATAGAAGGATGGATTATTCTCAGATTTTTTTGCTGACAACTATTGCTGTTAACTACAAGCAAAATAATCATTGATAATCTCAACTAGAGAACAATTAATCTACTCTAAGGGTCAGCAAAAGATAATCTCAACTAGGAATACTACCATTGCTAGTAAAAGTCTGAACGATCAAGCCAAACTGGTACTAAAATGGTAAATGCAATCTAGCATAGATTGTAGTATGTTGAGTCTAGGTGCACATGTGCATTTAAAGGTTGTAAGGACATTCAAGTAAGACAGAGCAGAGCAATGGATGACCAAATATTTCTTTCAATGTACCGGATAAAGCACCACCCATAGGATTTCGTTGTTCCTTAGAATAGAGAGATTGATGAAACTTTCTAGTTTCCTCCAGTTGTGAGATTTCATGTAAAATTCCATTTGCAGATTTTGAGGCATCTGGTGAATTTATGGTATTCAGGAACCGTGCTATGGTGGATTTTGTGAACCAGGAAGATCCTTTTGCATTCCCAGACAACGACAGCTTAAAAGTGCCAGCTGTTGAACACGATTGGAACTTCCTAGCATCTTCCAAGTGCAGGACTAATTGATCAAAAGGACCAGATGCAATCAATTCTGTATTCCCTTTACTGCAAGCAATTGCCTCGTATCTGTTCTGGGCTGAGGATACTTGGAAGACTGCAGAATCAAGCTCCACATTGCTAGCAACCGCCCCCTCCATGTTGCTTACAAGTTACAACCCTGACAACGGACTAATTGCTCAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0211800.1 | 3 | 12154949 | T | G |
| Osa03LNT0211800.1 | 3 | 12155683 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0211800.1 | osa-miR5791 | Cleavage | 5.0 | 16.301 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR5143b | Cleavage | 3.5 | 14.852 | 1 | 24 |
| Osa03LNT0211800.1 | osa-miR7694-3p | Cleavage | 5.0 | 15.587 | 1 | 22 |
| Osa03LNT0211800.1 | osa-miR169a | Cleavage | 4.5 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR399k | Translation | 4.5 | 22.515 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169b | Cleavage | 4.5 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169c | Cleavage | 4.5 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169d | Cleavage | 4.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169e | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169f.1 | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169g | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169h | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169i-5p.1 | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169j | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169k | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169l | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169m | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169n | Cleavage | 4.5 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169o | Cleavage | 4.5 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR435 | Cleavage | 5.0 | 20.831 | 1 | 20 |
| Osa03LNT0211800.1 | osa-miR810a | Translation | 4.5 | 20.169 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR1428a-3p | Cleavage | 5.0 | 17.661 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR1432-5p | Translation | 4.5 | 22.962 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR1432-3p | Translation | 5.0 | 21.261 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR169r-5p | Cleavage | 5.0 | 15.123 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR1861e | Translation | 5.0 | 19.884 | 1 | 22 |
| Osa03LNT0211800.1 | osa-miR1861k | Translation | 5.0 | 19.884 | 1 | 22 |
| Osa03LNT0211800.1 | osa-miR1861m | Translation | 5.0 | 19.884 | 1 | 22 |
| Osa03LNT0211800.1 | osa-miR1320-5p | Translation | 4.5 | 13.873 | 1 | 21 |
| Osa03LNT0211800.1 | osa-miR2879 | Translation | 4.5 | 16.915 | 1 | 24 |
| Osa03LNT0211800.1 | osa-miR5143a | Cleavage | 3.5 | 14.852 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0211800.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0211800.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0211800.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0211800.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0211800.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0211800.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0211800.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0211800.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0211800.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0211800.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0211800.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0211800.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0211800.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0211800.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0211800.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)