© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0212200.1
TGGGACAACTCAAGATCGGAATGGTTAAAATCCTCATAAATGCATCCAACAGTCAAGATTCACGTTTGTACTCAAGCTGTACATGAAGCGTCTCCCTTATAAATAGGCCTAAGAAAAGGCACAGAACAAGAACTCACAAGTAAGCTCATGCTGTATCAGATCGTTTTCATAAATCCTGGTTAATGAGGCTGGCAAATCATGCACAAAATAATATACTCTACCCTTCCTTCATACTTAATGAGGCTGGCTGATTCTGCTTTCTTCAGAGATTCTGCACCTTACATAGCTTGCTTCTGCAGCTGCTGCTCCTGCTTTTGCTGCTGCCTGGTTACAGAATCCCAAACTCTCTTCAAACTTTTAGACCATAAGGACGTATTCAATCAAATTTTACAGAGTACGTTTGACAAAACACTATGTCTGGCGTTATTTGAAATTTGCTCACTTTTCTACAACCTGGACAAAAGAAACACCCCATCCAATAATTGCAATTGAAGAATTGCATAGATTATATAGTACATACCAGTTCTACGAGTGACAGGAATTATACCAGAGAAGCTGCTCTTAGAAGCAATTGCCTTGTCTTGCCTCAAGCATGCCAATACAAAGTCAGAACGACTGCTTGAAGGATCATACTGCCATGCGTGGACCAAGTGGGAGGAGCGCTTCATCCAAAGTTCACACGGTGGGTCGAGCATCTCAAAACTATTGAATGACACCAGCTTCCTCAACCGTAGGTCGGCTGCGAAGATGCAAGATTTGAGGAAGAAATATACCCTGTTAGGATCTGTGGGGTGGGGGAGCGCAAGGGCAGGAATGGTCAACGGCAGCATGGTGTCCACATAGCTCTGGTCAATCCAGAGCTCGGCCAAGGGCGCGCTGAGCTGGGGGTTCCACTCCCACTCCCCGGGCGAGCAGGTCGATTCGTCGAGCAACCATGTGCTGACCACCGGCACAACAGGATTGCCGTGTATCTGCACGTACATCAGCCTTCCTCCGCTCACCTTCACGCAGCGGTGGGCACCGCGGTTAACCTGGTCATCAACAGGAAGCTCGTCGGGAACTTGTGGGAGCGGGACGTGGATCAGGTTCGGCTCCTCGGCGAAGGGATCGCACGCGAGGAGGCCGTAGGAGAGGTCCACCCACCAGAGCATCCCGCCGTGGGAGACGACGCCCTCCGGGTACCAGTCCAGCGGGAGTGGGGGCGAGCAGGTAAGCTCCCTCTCGCGCCACTTGCAGCACTCCCCCACCTTGTAGCTGAGCAGAGTGGCACCACCGGTGCTTGTGCCCTTGCATCCCGGCTGGAGCTCAGCGACCATACAGCCGTCGTCCTTGATGATGAGACCGACGTTGGCGGCGCCGTAGAAGGTCATGGGGCGCATTGGTTTGCAGTCGCGGAGGGAGACTACCTCACCGGTGTGCGCATCACAGATGTGGTAGGAGACCATGGCGGAGGCGGAGGTGACAGGATGCGTGCCGAGGAGGAGAAGGCCAGAGCGGTCGGCGGCGACGACATAGGGGTAGAGTCCGAGGCAGGCCGGGAGGGAGATGTGGCGCGGCACGGTCAGGACGGAGGCTCGCGGGACCTCCTTGCGGGCGACGGAGATGTCGGTGCCCGGCGGGAAGATGCGCTTCGCCTCCTTGTACCCCACCACGTTAGGGATTGCGGCCAGAATGGCCCAAGGCTCCTGCGCCGCCGGCGCCATGGCTGGATTTTTTCGGAGGAATTCGATCGGTTAGGGTTAGCGGCGAGGCCGCGACCGGGCAATCACGAAAGGGGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0212200.1 | 3 | 12336197 | A | G |
| Osa03LNT0212200.1 | 3 | 12335887 | A | G |
| Osa03LNT0212200.1 | 3 | 12335986 | A | G |
| Osa03LNT0212200.1 | 3 | 12336897 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0212200.1 | osa-miR169i-3p | Cleavage | 5.0 | 20.495 | 1 | 22 |
| Osa03LNT0212200.1 | osa-miR171g | Translation | 4.5 | 18.524 | 1 | 21 |
| Osa03LNT0212200.1 | osa-miR528-3p | Translation | 5.0 | 21.035 | 1 | 21 |
| Osa03LNT0212200.1 | osa-miR1429-5p | Translation | 5.0 | 11.922 | 1 | 21 |
| Osa03LNT0212200.1 | osa-miR2097-3p | Cleavage | 4.0 | 21.065 | 1 | 22 |
| Osa03LNT0212200.1 | osa-miR5150-3p | Cleavage | 5.0 | 19.994 | 1 | 24 |
| Osa03LNT0212200.1 | osa-miR5497 | Cleavage | 5.0 | 19.718 | 1 | 21 |
| Osa03LNT0212200.1 | osa-miR3981-5p | Cleavage | 4.5 | 21.069 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0212200.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0212200.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0212200.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0212200.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0212200.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212200.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212200.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0212200.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212200.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212200.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212200.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)