© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0212300.1
ATCCAACATGCCATATGTATTTCAAATAAAAGAAATACATTGTACAGATTACATAGCGATATGAGTTTCCTTGCAATTTGACCAAAAATGCGGTCCAAACTTACAGCATCTAGACTACAATCCTTGCATACTCCTAAGAGTGTACAGACTACATTGTATGGATTAACAGCGAAGGCTACATTCATCAAACTACAATCCTTTTAGCACCATCCACTTCTGCCTGCTGCATTTACCATCCTTTTAGGCAATCAATTTTCCTCTTTTGTATTTTGCACAAGGTTACAATAGTTCTCAGGATAACTTGACATCTGGCAAAACTAGTTCTCAGGATACAAGGTGTTCTGAATCTTTACAAACTCCTAATAGTGTATATACTACATAGTAGGAATTACAAAGAAAGGCTACATTCATTATCTTGTCATTAATTGTTCTATGCCACTTCTTCAGCATCCTCTCGTTCATGCTCTTCCAATCTTCAATTGCCATTCATGCCGCACCCCATATATCTCACCTGCAATTCTGCATTGGCCTCCTGCACAAAAGCGGAAGTTGCCAGCTGCCAAGTGTGCCAAGAACAGATATCTGATTTTTGCAACTGATTGTGTTGTCATGTAGTGCATATAAAAGAAAAAAAAGAGAGAAACCAAATGTGGTTCAGTTCAGATTTGGCTCTGTCTTGTAGTGACAGAAAAAGAGAAGCCACCAGGTGGTTCAGTTCAGATTTGTCAGGGGGAAGCCAAAGCCTTATGTTTCTCTAGTTGTTTCAACTATTTTCAGTGGAAGTATCACAGCTGAATATACAACATGCAACATATCTTACTCCTCCACTATGCAAATTATTCAGTGTGATACTCAAGTTTCAGATTTTTGCCTGTTTTCTGGTGACCTATTCCTAGTCAATTTTGATGTGAGCCTACTACCCCACTTTGCAAAATGTCCAACAATTTTACTGATATGATGATTGGTCGGCCAGGCACCGAGCGAGTTGCCAATACAGAATGTCTGTTTTGTTTATGCAAAACAAAAACCGATTGTCTCAAACTAGTACTAATTAACACTATCAAGCTGCAATGATATATGCTAGGCTTACTACCTAATCACATGAAAACCAAAACTGAGCAATCAAACCAGAATCTAGTGACCATGATTAATTACCGCAATAAAAACCAAAACCGAGCAATCAAACTATGAAACTCTCAATGCACGGGAGGGTGCCGCCTGGCCCTTCCATCGTTGCTGCCCTGCTCTAGGCATGGGAGGGTGCCGCCACTGCCCTGCTCCAGGCACGGGAGGGCGCCGCCACTGCCCTAGCTGTCCGAGGGAGCCGCCGCCGCATTCCGTCTCCACGCGCCCAATAGCGGATGAGAAAGGGGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0212300.1 | 3 | 12366533 | G | A |
| Osa03LNT0212300.1 | 3 | 12366881 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa03LNT0212300.1 | DTM_#DNAt_MULE_japo_Os3282 | Chr3 | - | 12362493 | 12367707 | 1374 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0212300.1 | osa-miR5526 | Cleavage | 4.5 | 20.03 | 1 | 21 |
| Osa03LNT0212300.1 | osa-miR5538 | Translation | 4.0 | 20.456 | 1 | 22 |
| Osa03LNT0212300.1 | osa-miR5789 | Translation | 5.0 | 16.271 | 1 | 21 |
| Osa03LNT0212300.1 | osa-miR5825 | Translation | 5.0 | 15.647 | 1 | 24 |
| Osa03LNT0212300.1 | osa-miR416 | Cleavage | 4.5 | 19.314 | 1 | 21 |
| Osa03LNT0212300.1 | osa-miR1881 | Cleavage | 4.0 | 11.045 | 1 | 24 |
| Osa03LNT0212300.1 | osa-miR5071 | Cleavage | 5.0 | 13.858 | 1 | 21 |
| Osa03LNT0212300.1 | osa-miR5509 | Translation | 3.5 | 18.36 | 1 | 21 |
| Osa03LNT0212300.1 | osa-miR5509 | Translation | 5.0 | 17.703 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0212300.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0212300.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0212300.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0212300.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0212300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212300.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0212300.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212300.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)